EMLSAT00000001358, EMLSAT00000001358-697205 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001358
Unique NameEMLSAT00000001358-697205
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s122supercontigLSalAtl2s122:714803..716117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001358 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001358EMLSAG00000001358-684124Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005910EMLSAE00000005910-714838Lepeophtheirus salmonisexon
EMLSAE00000005911EMLSAE00000005911-714839Lepeophtheirus salmonisexon
EMLSAE00000005912EMLSAE00000005912-714840Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779447auto779447Lepeophtheirus salmonispolypeptide
EMLSAP00000001358EMLSAP00000001358Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001358

>EMLSAP00000001358 ID=EMLSAP00000001358|Name=EMLSAP00000001358|organism=Lepeophtheirus salmonis|type=polypeptide|length=135bp
MKLLYPDSGKKRSDIYLNGHRLTPWIYHLSRGGLRVPSDYFSKYCVVYSL
KDCEVFAQKLKEFNLPLLDRHPKVIERFCQVLEDSFGGKYGKPVLNLFAK
TRTMIRIRYINAQLEFNTGGSEKIRGKKQICQFQV
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mRNA from alignment at LSalAtl2s122:714803..716117+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001358-697205 ID=EMLSAT00000001358-697205|Name=EMLSAT00000001358|organism=Lepeophtheirus salmonis|type=mRNA|length=1315bp|location=Sequence derived from alignment at LSalAtl2s122:714803..716117+ (Lepeophtheirus salmonis)
TAAAAAGTTCCCGAAAAATTTGCATGAATCAACATTCTCTCAAACTCTCA
GCAGTGTCGATAATCAAGGTAAAGACCAAGTAGATTTTATTTTACCTCGT
TCCAGGAGAGAAATGAGGAGGCAAAACAAACAAATAGTAACCTTTATTGA
TAAAGGAACCGGAGCAACAGAATAAGGATATTGGGATACAGACAGAACAT
TCCCTTTTTCTGGAAAATACTGATCATCTCAAAGCAGAATTTAAGAAAAC
GAAAGCTGATTTATGTAAACAAAAAGTCAAGGTAAACATTCTCACAAAGA
AACTCGAGTGACTTGGAGGTCATTGGGAGGGGAAATAAGAGTCAATTGCC
ATGGCAGAGAGGMATGCGAGTTTCAATCAAGTCAACTCGAGCCTTGTACC
ATGATTTGATTTCTTATGGTCCTCTTTCTTTCATTTTGATGTCCAGAACT
AATCAAGATTGCCTTGAAATTTTTTTTACCCGTTTGAGAAGTGCTGGTGG
AGATGATGATCACCCTGGAGCCGTTGGAGCAATGAAAAGGATGATAATTC
TGGAATTTGGAAAAAATTGTGAAACTTTGATGAGCAATCCGGCCCCTTCA
GATTGAAAAAGAATATGACATTTATAGAATTGAGGATGAAGAGGAAAAAT
AATCCGTAACAAAGCAAATCACTGGAGACATCTTAGATATCACAATTGGT
GAAAAAAGCTGTTCAGAATTTGAATTTACGTTTGATATCCCTCATTAAGT
TCATGTGGATTTTGCAATAAACCATCAACTTGATCGGTTCAAAAAATGAG
ATCTCAACTTTCAGGGGCTCAGTTATGTATCGGGTTTTATTGCCCACAAG
ATGAAACTTTTATATCCGGATTCGGGGAAAAAGAGAAGTGACATATATTT
GAATGGTCATAGACTGACACCATGGATATATCATTTGTCTAGAGGAGGAC
TGAGGGTGCCATCTGATTATTTTTCAAAATATTGTGTAGTTTATTCTTTA
AAAGATTGTGAAGTTTTCGCCCAGAAGCTCAAAGAATTCAATTTACCTCT
ATTAGATCGTCATCCCAAAGTAATCGAACGTTTTTGCCAAGTTTTGGAAG
ACTCTTTTGGAGGTAAGTATGGCAAGCCTGTTCTGAATCTCTTCGCCAAG
ACAAGGACAATGATACGAATAAGATACATCAATGCACAATTAGAATTTAA
TACTGGAGGGAGTGAAAAAATAAGAGGAAAAAAGCAAATCTGCCAATTTC
AAGTTTAATTATAATTTAACCAAATATTCAATATAATATTAATTATCACC
AAATAGATTATTTTA
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