EMLSAT00000001368, EMLSAT00000001368-697215 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001368
Unique NameEMLSAT00000001368-697215
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1230supercontigLSalAtl2s1230:134148..135104 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001368 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001368EMLSAG00000001368-684134Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005944EMLSAE00000005944-714872Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773009auto773009Lepeophtheirus salmonispolypeptide
EMLSAP00000001368EMLSAP00000001368Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001368

>EMLSAP00000001368 ID=EMLSAP00000001368|Name=EMLSAP00000001368|organism=Lepeophtheirus salmonis|type=polypeptide|length=318bp
MNRIPEVGTGFQPMKLEVDNSLLEKSLSILNAPQTSEATSKFKTQVPSLF
PGSYEGSSIEVTPSPGFCVKSCNIHGKKVFINFCKVSEIPTAAPISEEDL
IKIIEEENYETPYRVPMSLGAPREDKDKSTKKCYVTDVAVNGAWFDQVVD
GSPVFTAFLVNVAMEGLCDKYGDELNVDRNGYSILRKKNYYGKLQRHRIQ
KRERKIYETFETSENKSMIEEIKISKNSSKTKKPALKLIKAEGNILSAEI
HLPGIRSASELELDLGEDRIKLKSMNKGTNIGPYNLDVFLPLLIFNDSSL
AEYHIKSQTLKINMPLFK
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mRNA from alignment at LSalAtl2s1230:134148..135104+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001368-697215 ID=EMLSAT00000001368-697215|Name=EMLSAT00000001368|organism=Lepeophtheirus salmonis|type=mRNA|length=957bp|location=Sequence derived from alignment at LSalAtl2s1230:134148..135104+ (Lepeophtheirus salmonis)
ATGAATCGGATACCAGAGGTTGGAACGGGMTTCCAGCCTATGAAATTAGA
AGTGGATAACTCCCTCCTCGAGAAAAGTCTATCTATACTTAACGCGCCTC
AAACGAGTGAAGCGACGTCTAAGTTTAAAACCCAAGTTCCTTCCCTCTTT
CCAGGTTCCTATGAGGGTTCCTCCATTGAAGTGACTCCCTCCCCTGGTTT
TTGTGTCAAATCCTGCAATATTCATGGGAAAAAAGTATTTATTAATTTCT
GTAAGGTGTCCGAAATCCCTACTGCAGCTCCAATATCAGAAGAAGACTTG
ATTAAAATTATTGAAGAAGAGAACTATGAAACCCCTTACAGAGTACCTAT
GAGTTTGGGAGCTCCTCGTGAGGATAAGGACAAGTCAACAAAAAAGTGTT
ATGTGACTGACGTTGCCGTAAACGGAGCATGGTTTGATCAAGTGGTTGAT
GGTTCTCCTGTTTTTACTGCATTTCTCGTCAATGTGGCCATGGAGGGTCT
ATGCGATAAATACGGGGATGAACTCAATGTAGATAGAAACGGATATAGCA
TTTTGAGAAAGAAAAACTATTATGGTAAATTACAGAGACATCGCATACAA
AAAAGAGAGAGAAAAATCTATGAAACTTTCGAAACATCTGAGAATAAGAG
CATGATTGAAGAAATTAAAATTTCCAAGAACTCTTCAAAAACAAAAAAAC
CTGCACTCAAACTCATTAAGGCGGAGGGAAATATACTTAGCGCAGAGATA
CATCTACCGGGTATAAGATCTGCTAGCGAATTAGAACTGGACTTGGGAGA
AGATCGAATCAAATTGAAAAGTATGAATAAAGGAACAAATATAGGCCCTT
ACAACTTGGACGTATTCTTACCTCTTCTGATATTCAATGACTCTTCACTT
GCCGAGTACCATATAAAATCTCAGACATTAAAAATAAATATGCCTCTATT
TAAATAA
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