EMLSAT00000001374, EMLSAT00000001374-697221 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001374
Unique Name	EMLSAT00000001374-697221
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1230	supercontig	LSalAtl2s1230:24829..29071 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001374 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001374	EMLSAG00000001374-684140	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000005973	EMLSAE00000005973-714901	Lepeophtheirus salmonis	exon
EMLSAE00000005974	EMLSAE00000005974-714902	Lepeophtheirus salmonis	exon
EMLSAE00000005975	EMLSAE00000005975-714903	Lepeophtheirus salmonis	exon
EMLSAE00000005976	EMLSAE00000005976-714904	Lepeophtheirus salmonis	exon
EMLSAE00000005977	EMLSAE00000005977-714905	Lepeophtheirus salmonis	exon
EMLSAE00000005978	EMLSAE00000005978-714906	Lepeophtheirus salmonis	exon
EMLSAE00000005979	EMLSAE00000005979-714907	Lepeophtheirus salmonis	exon
EMLSAE00000005980	EMLSAE00000005980-714908	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769667	auto769667	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001374	EMLSAP00000001374	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1230:24829..29071-

protein sequence of EMLSAP00000001374

>EMLSAP00000001374 ID=EMLSAP00000001374|Name=EMLSAP00000001374|organism=Lepeophtheirus salmonis|type=polypeptide|length=511bp
MAXVAMDKIKTYGXARDAFEWXEXLYFSGRMSSEVIEMLFEAMRSGSLSQ
AEDLVNRYGSEIYKERDEYGHTPAHWMALNGHIAIARHMISKYGVLDLHS
DNSQGPRPIHWASLMIKFIYDKAGVHVDATDHKGLTPLMMACMFGRSMMA
AYLLGRGAQPHLTDMNGDSALHWAAYKGFPALMQMLIYSGFDPQKPDNFG
SSPLHLACISGNLMAVKLLCAKSSVDLEPRDRNRKTPLDLAAKHGHEDII
KFLESEKRRRNTFLPVFLDIWTLVFGQSGRTKGPILFFLGSVLLWAYPMY
FLRCIPVTWEALPQTHYTFLVINLTLMNGKIPVXXXLCHSCRVVRPLRAK
HCRICDRCVAQFDHHCPYIYNCVGLRNRGWFLIFTLSVAINCSITIFFAC
YCISIEGWKLLYIIGLIEALVFCGLGWLLSGFTLLYAAMNLTTNEMFNYK
RYNYLKNSRGKYHNPFSRGLFYNLAEFFLCVQPIEFEEKKQDHHSPDNMS
ESEQLIDYLRV

mRNA from alignment at LSalAtl2s1230:24829..29071-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001374-697221 ID=EMLSAT00000001374-697221|Name=EMLSAT00000001374|organism=Lepeophtheirus salmonis|type=mRNA|length=4243bp|location=Sequence derived from alignment at LSalAtl2s1230:24829..29071- (Lepeophtheirus salmonis)
ATGGCTGKAGTTGCAATGGATAAAATAAAGACTTATGGAAGKGCTAGAGA
CGCTTTTGAGTGGGRTGAGAGKCTCTATTTTTCAGGAAGAATGTCTTCTG
AAGTAATAGAAATGCTGTTCGAGGCTATGAGATCTGGGTAATTAAAATAC
TGCTTACTCCTTAATTTCTTATCATTAACTAATGTAAGCACCACACAATT
ACTTTAAGAAATTAGCATTATTCTACCTGAACATACTGTATATTTTTTAT
ATTTTATGGAGTAATGTATGTATTACATATTATTTGATATTATATTGTAC
TTGAATAGCTCTAAATTAATGGGAAAGAGTAAGCTGAGAGGAGGAAGAAG
TCAACTTTCACCCACCCATTTTGATTCATTAGTACTGTCATTCTCCTTAT
TGCATTTTGATATATTACTAATAATAACTATTTTATTTTAAAATATTTAT
TGCATGAATGTACTTTCTAGATGATAAGTACTTTTTATGATTATAAATTA
TCCATTTCAAGGTCTCTATCTCAAGCAGAGGATCTTGTCAACCGTTATGG
ATCAGAAATATATAAGGAGAGGGATGAGTATGGTCATACTCCAGCACATT
GGATGGCACTCAATGGACATATAGCTATTGCAAGACATATGATTTCTAAA
TATGGCGTCTTAGATTTACATTCAGATAATTCACAAGGGCCTCGACCAAT
TCATTGGGCAAGTCGAAACGGACATGTAGCAATTGTAGATCTTTTTCTCA
CTGTGAGTAAAGATGGAGGAGTATCTAATTATTAGCAGGTTTAATGATAA
AGTTCATTTACGACAAGGCTGGTGTACACGTTGATGCAACAGATCACAAG
GGACTAACACCACTGATGATGGCATGTATGTTCGGTCGCTCAATGATGGC
AGCCTATTTGCTTGGCAGAGGAGCACAACCCCATTTAACAGATATGAATG
GGGATTCTGCTCTTCATTGGGCTGCTTATAAAGGTTTCCCAGCTCTTATG
CAAATGCTCATTTATTCTGGTTTTGATCCCCAAAAGCCAGATAATTTTGG
TTCTTCTCCTTTACATTTGGCATGCATATCTGGGAATCTTATGGCAGTTA
AATTACTTTGTGCTAAGGTAAAATATTTATCATCATTTTTTAAACAACAA
CGTTAGTCTCATTCAGTTTCCATGATAGGAATTCCCCTTCATTCAGTTTT
TTAGATATTTTAATTTATTTTAAGAGTTCTGTTGACTTGGAACCACGAGA
CCGTAATCGTAAAACACCATTGGATTTAGCAGCTAAGCATGGACATGAAG
ATATTATAAAATTTTTAGAAAGTGAGAAACGCCGAAGAAACACTTTTCTC
CCAGTATTTTTAGATATCTGGTGATGCAGTTACGCTATTGTTTGAAAAAT
TTAATTTCATTAATGATTTTTTACAGGACACTTGTCTTTGGGCAGTCGGG
GCGAACTAAGGGTCCAATTTTATTTTTCTTAGGTTCTGTATTACTATGGG
CCTATCCAATGTATTTTCTAAGGTGTATACCCGTTACTTGGGAAGCTCTT
CCTCAAACTCATTATACATTCCTTGTCATCAACGTAATAATGTGGTTCAG
TCTTATAKTAGCCAATCAAAAAGACCCTGGATTTCTTTCTAAAAACACGG
ATGAATATCATCGTGCCATCAAACAAATAGCTTACTTTGATGAATGGAAA
AATCCCCGTGGNNNNNNNNCTGTGCCATTCCTGTCGAGTTGTTAGGCCTT
TAAGAGCCAAACATTGTCGCATCTGTGATCGCTGTGTCGCACAATTTGAC
CACCATTGCCCATATATTTATAACTGCGTTGGACTACGCAACAGGTATAT
ATTTTTTTGCTTCCATTGTGCCTCTATTTGATTAAATTGTATTTCAGGGG
ATGGTTCTTGATATTCACATTGAGTGTGGCTATAAATTGCTCAATTACAA
TATTTTTCGCTTGTTACTGCATCAGTATTGAAGGTTGGAAACTCCTTTAC
ATTATTGGACTCATAGAAGCACTCGTATTTTGTGGACTGGGGTGGCTTTT
ATCAGGTTTTACACTTCTCTATGCCGCTATGAATCTCACTACTAATGAAA
TGTTCAATTATAAGCGTTATAATTATTTGAAAAACTCTAGAGGTAAATAT
CATAACCCTTTTTCTAGAGGGTTATTCTATAATTTAGCAGAATTTTTCCT
CTGTGTACAACCCATCGAGTTCGAAGAAAGTATATTGCTATCAAGCTAGA
GAAAGGGGATGATGGAGACGCTTATTAGTCTTATTCTGGTTTAAATGAAT
TTTTACTTATAGCCATTACCTGTGTAGTAACATTTCTCCATGGCTATATT
GAGTCTGCTATAAAAAAATGTTTTAGATGTATTTTTTTTAACAATTTATT
ATTTTGTTAAAAGCAGGTAAGTAAAGGAATAACAAACTAAATATCGAGAG
CTTTAGTTAATCAAATATCTCACTAAATTAAAAGAAATAACATAACAAAA
TGAATCTTTTCATACAAATCCTTGAGACTAAAACTAATAAAAGAATGGCT
TTAATTATATAGTTAGTTTTTGATGAAGGAAGATGGACATCAGTGTGTGT
TCCTTTCATATTAATTTGCTTAACCCTTCTGTCCCATATACATGGTCTAA
TTATAATAACAAAATGATTTTTTACCTATTGCAATTGGATGATAGCTATA
ATTGACATTTGAATAGAATAAGAAATGTATTAGATCATGATATAATCAAA
TAAGTCTATATAATTGATATAGGTGTCCCTTTTTATCTAAGATTTAACGA
GAGATTGAATCATAGCTCTGAAAGGATCATTGTTGGAAAATTGGTGTTGC
TTTAAAAACTATATATTAATTGAATTGATACATGTTTAAAAAAGAAGAAT
TAGATCTAGAAAGACTCAAACAAATGAACGACGTATCGGAGTTAAGGTTT
TTTTCTTCATTGTTGCCTCTTAATTTTAGAGAAGAAAAAATGAAATAGAT
ACTTATTCATATTGTTGACTAAATAATAAGATCTATTAATATAATATGTA
GTAGTACAGCTAATTTGATATCTTATTATTAAGGAGATAACGTGTACCAA
ACTAGATGGATACATTTGGAATGTATGACTTTGGCCAAATTGCTTTTTCA
GCTAGATTTATGTCAATAGTGAAAACTAATCCTTACTTTGATTTATCATA
TGTTTACGTTTCTAAAGCTCTGAAAATAAATAATTTGCATTTGATTGTTT
GATATTTTATCTAAATYTCACGATTTTGCACGCAATATAATACCAGTCAA
CAAAATTTCAACTTTTTGCCCTTGTATTGAGATGGTGTGCCCCTAATGGC
TTTTACCCAGAGAAACATTAAAAGGACCTTTATAATCCGAAAATTTTGCT
TTTGTACCCTACATCGCTTTTTTGATAAATATTTTTTTACACTTACCTGC
TTTAATAATATTTTTTGCAAAAAAAAGTATAAAAAAATGACGAAAAATCG
ACATTTTCATTTTTTTTGAAAGCCTATTAAATTCCTTATTTTTGATCACA
ATGATAAAAATAGTAGATATTAACTAAGTCTACTGTATTAATGTCATATT
TGATTAAAAGCGTAGCTATACATTTGTAATTGTTGTTAAGTGAAGACATA
CAACTTCGTAATAAAAAATAATATCTTAAAAGTTATTTAACATTTATTGT
TTGAAAAATATTTGCGTACATATATTCATTAAGCAATCAAGGTTTATTCA
TAGGATGAATATGAAATTTTGCTTTCTGTAGATCGCAAAATCAATTATTT
TGGGTTATAAAGGTTATTTTTATTTTTTTCAATGTAAAAACATTACAATC
AGGAAACCCTAGCTCAATCCAAGGGCAAAAATTTGTTTACTAGTGAATTA
AAAAATAAATAAATATTTTTTTCTGTGAATTTTGGAATTTAAATCAAAAC
AGCAACAAAATAATTATTTAATTAGCATGTGTAGCTTACAATGATGTGTA
AAAAATCCGATTAATTTAAATAATGATTAATGAATTAAACAAAAAAAGAT
GGTTGTTAATCAAAAAAGATTAAAAAATCTTAATTAGATGAGATATTGCT
GTTTAGTTTAACATTGACGTACATATATATACATTTCTAAATAACATAAC
TTTAAAACAATTTCCTTTTCAGAAAAACAGGACCATCATTCTCCAGATAA
CATGAGTGAATCTGAGCAATTAATAGATTATCTTCGTGTTTAA

Add to Basket

Search form