EMLSAT00000001389, EMLSAT00000001389-697236 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001389
Unique NameEMLSAT00000001389-697236
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1236supercontigLSalAtl2s1236:23353..30360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001389 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001389EMLSAG00000001389-684155Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006037EMLSAE00000006037-714965Lepeophtheirus salmonisexon
EMLSAE00000006038EMLSAE00000006038-714966Lepeophtheirus salmonisexon
EMLSAE00000006039EMLSAE00000006039-714967Lepeophtheirus salmonisexon
EMLSAE00000006040EMLSAE00000006040-714968Lepeophtheirus salmonisexon
EMLSAE00000006041EMLSAE00000006041-714969Lepeophtheirus salmonisexon
EMLSAE00000006042EMLSAE00000006042-714970Lepeophtheirus salmonisexon
EMLSAE00000006043EMLSAE00000006043-714971Lepeophtheirus salmonisexon
EMLSAE00000006044EMLSAE00000006044-714972Lepeophtheirus salmonisexon
EMLSAE00000006045EMLSAE00000006045-714973Lepeophtheirus salmonisexon
EMLSAE00000006046EMLSAE00000006046-714974Lepeophtheirus salmonisexon
EMLSAE00000006047EMLSAE00000006047-714975Lepeophtheirus salmonisexon
EMLSAE00000006048EMLSAE00000006048-714976Lepeophtheirus salmonisexon
EMLSAE00000006049EMLSAE00000006049-714977Lepeophtheirus salmonisexon
EMLSAE00000006050EMLSAE00000006050-714978Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769655auto769655Lepeophtheirus salmonispolypeptide
EMLSAP00000001389EMLSAP00000001389Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001389

>EMLSAP00000001389 ID=EMLSAP00000001389|Name=EMLSAP00000001389|organism=Lepeophtheirus salmonis|type=polypeptide|length=229bp
MFNNGVYYTNMMPIYARTVFPCFDEPSFKSVFNITLRRPKNMISISNMPI
NQTITPGNSVDFVSDIFKSTPLMSTHLVAFVITNYTNETILSNNTQLRIW
TPEDDKSKTCLAKSVSPTLYRYLNQYFGKNLPITKQDMITIPANISFNYI
AMENWGLSTFQXEALLIEENVTSVSSLLSKDEIVLEISQMLTHQWMGDLV
TISWWCDLWLTVGSTXLFIIFGVNKNFSR
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mRNA from alignment at LSalAtl2s1236:23353..30360+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001389-697236 ID=EMLSAT00000001389-697236|Name=EMLSAT00000001389|organism=Lepeophtheirus salmonis|type=mRNA|length=7008bp|location=Sequence derived from alignment at LSalAtl2s1236:23353..30360+ (Lepeophtheirus salmonis)
ATCGCATGATAACAATATCAAAATCCCTTGTGTTTAATGTTAACATATAA ATATGAAGATAAAATTATACTTTGAGTTATCCTGGAGTAATAGTTGCAAC ATGTCACGACTATTATTATTATTGATGTGGGTCGTGTATTGTAGTGGCGT TAAGGTAAGAATTATTTTGTCTTTTAAATTTACATATACAGTAGACCCTG GTTTAACAGCATCCTGTTTTTTGCGTGTCACTGCACAACACGGCGTATCC AGTTTTCACATTTTGAAACCAAACAGGAAACCTGGTTTAGAAGATGACCG ACACTAATCAGTCTTTTTTTATTATTCATATGTTACGGAGAGCGAGACTT GTTGTTGGCACACTTTTAACTTTCTGGCATATTATTCGGCTTMTACATGT AATATTTAGATATGATTTGAATTTTTATGCTATGTTTAAAGTAGTATACA AATTTTGCGATCCATTTTATAGAATAGTCATTGTTATTTCCGGTGTAGTA CCAATTTTAATGCTCGCAAGGTTTTGAACCAAACCGATGGGGAACAATTG GTCCAAAGACTTCAATTAAGCCCAAATAGTATATTTTTAATAAAATAAAA ATAATGAACAGAGAAAAGGGTTATAAATTCAGAAAAGGAGTCACAACAGA GGTGCATGTGCTCTCACTACTTTCAAAGAACCGTAGATAATGTAGCACGA AGACGTTGTTATTCAACAAAAGTGTTTGAGCACAGGTCATAGAAACTTGC TTGAAATTGAAAAATACTAAAACCAATTATACCTCCCTATTATTATTTCA AATGTATTTTCATTTATTTTTAAGGCTCTTGATTTTCGATTACCCAGTCA TGTCGTACCTAAAAGTTATAGTATTGAACTAAATCCGGAATATGAAAAAA CTAACAATCTCTTTGGAGTCGTCAAAATTGAAGTTATGTGTGTTATAGAT GGATCTAAAAATATAACATTGCATGCCAAAAACATCAATATTACACATAT GGACATTATAGATAAAGTTTCGGGAAATAACATAAACATTACAAATTCAT CAGCAGGAGAAGTTGGTACTGACTTTGTTGTTATTCATTTATCAACAAAT CTTAACATTGGCTCAGTATTACATTTTGACGATAGAATTACACAACTAAT TTTTATTNCCAGATGATTATGAATATGATCTTATCTATGATAGTAACGAT GAAACAAATGATAGAACAACATTGGATGACAATACACCTTATGTCTATGA AGACAATACCAAGGGATTTATGTTTAATAAGTAATTCATTTGCATTTATA TTTAATCGTTAAATATGTAGACACAATTTCAAAATTCAACATAATTTTAG TTTTAACTAAATCAAGTAGGTTCCATACCCAATTATAGTGAAGGTTATTT TTTCTGTGAGTGTGGCCTAAGGTAAAGATTAATATGCCGCCCTCTTCTTC ATGTTTTAAATTTAATTTCGAATACTTGTTATTTAAAAGTTATTTTGCAA GGGCCTCTACTTTTACATCAAAGTGCAGTAACTAGGCCAAGCCAGTTTTA CTGCGAGCAAAGACAAAATAAGAGCTCTGTATCTTTTAATGTCCCTTTAA TTTGTCAGATATAGATGCACTGCTTAAGTATTAATAAACATAATGGTATT AAAATTACTATATCTGACCTACGAAATATCTATAAAGTCCATATACATAA AGTATATTTCCTTTTCTAGGAACTATTGAGACGCAAAACTAAGCATTTTC AGTTCAAGAGAATAATTTCTCCCAAGCCGGTTGTCCATTGTGTTACGCCG TTCCATATTTATATTCAATTCTTATTCATGACTAAATGTTCTACATTAAT TTAAATGTGCCCGCATAAAAAACTCAACCCCCCGACGTACGAGATACAAA AATTTGGAGGCCATAACAGATCTGTAGAAATCTAATTAATGTTCGGCACA CTAATAAATTTAACCTTTAATTGCTTTTACTTTCTTTTAGTGGAGTCTAC TACACTAATATGATGCCAATATATGCTCGAACTGTCTTTCCTTGCTTTGA TGAACCAAGTTTTAAGTCCGTATTCAATATAACACTTCGTCGTCCAAAAA ATATGATCTCAATTTCAAATATGCCAATCAATCAAACAATTACACCTGGG TATTATTTTCCATAGCATTAATCTATAAATGTTTCCAAATCATATCATTC TTTCAATTAGAAATTCTGTAGATTTCGTATCCGATATCTTCAAGTCCACT CCATTAATGAGCACACATCTTGTGGCATTTGTCATTACAAATTACACAAA TGAAACAATTCTCTCGAACAACACACAACTAAGAATTTGGACTCCTGAAG ATGACAAGTCAAAAACATGCTTGGCAAAGAGTGTCAGTCCAACTTTGTAT CGATATTTGAATCAATATTTTGGAAAAAATCTGCCAATAACTAAGCAGGT TAGTCAACACAGGAATCGTGGGTTGGGATTTGAAGGTTATTTTTCTTGCG AGGGAGGGGCATAATTCCCCATAGGGCTCTTGGGATGGGTAGTTCCATAC TATTAATTCTATTAATTTAAGGATATGATTACAATTCCTGCAAATATTAG TTTTAATTATATTGCAATGGAAAATTGGGGTCTTTCAACTTTCCAANCTG AAGCCTTGTTGATAGAAGAAAATGTCACATCAGTTAGTTCTTTGCTTTCA AAAGATGAAATTGTACTCGAAATATCACAGATGCTTACACATCAATGGAT GGGTGATAAATGAATTTTATTTATGGAATTCCAAAAAAATGATTTTTGTA CATTTTTTGTTTATTAGGTGATCTTGTTACTATATCCTGGTGGTGTGATT TATGGCTTACTGTAGGGTCAACATNCTTATTTATCATATTTGGTGTCAAC AAAAATTTTTCCAGATGATAGGGCGTGGGATATATTTCTGATCTTTGTTT TTCAAGAAGCCATGGAAAAGGATTCTCCTTTGGTGCCAGTAACAATGAAG AAAATAATAAGGAATAATGGAGAAATACCAAATGGGCTTGATTCACTAAC TTACTTCAAAAGTGCTTCGTTTATTAGAATGTTAAGTGGTATCATTGGAG AGAACGACCTTCATATGGTTTATAGAAACCTAATGGCAAAGTAGTATGTT TAATTTTTTCACTTACTTATTAAGAATTTGTAGATTCATCAAAGTTTATT TATTTTCCTATCGAAACTTTACTCTGACAATATTAATCTAATAAATGTAA TTTTACGAGTATTTATTATATTTATCTATTCCTAGTGAATTGAAAAACAT AGATGAAGATTTGTTTTGGAAAGAAATAGATGGGGTAGTATCTTCTTCTA TAAAACCTAGTATTCTCAACAATATGACAATGAAGGCTTTGATGGGACCA TGGCTTACACAAGCAGGATATCCAGTCATACACGTGTCTCCAAATTTTGA AAATGGTTCTATTCAGATTTATCAGGTTATCTCTCAATAAAAGGATTTCA AAATATCTAAGCCACAAATTATTATTATGTATTTAGGAAAATTTTAACGC GCGTGACAAAGTAATTAATAATCTATGGTGGGTCCCATTAAAATATAATA TCATTGACAAAAACGAAAATGGGACAATCAAACTAATTTGGCTGAATAAT ACCAAAATGAATCAAACTTTTCAGGATACGGATTTAAAAAAAAGTTTTCC TTGTTTAGAACCTGTAGTTTTCAATATCAACCAAACAGGTATGCTAATTA ATCATATTTCAATATTTTTAACTCGTATATCATCACTAATATTTTAAGGA TATTATCGAGTTAACTATAATGATGATAATTGGAAACTAATCACACGTTA TCTTCGTTTGAATCACTCAAGAATATACAAATATAACAGGGCCCAATTGA TAGATGACTCATTTAGCTTGGCTATGGAAGGGTTCCTTAGTTACTTAATT CCCTTCAAAATAACTACATACTTACCAAATGAGGATGAACCATTAATATG GATTACCTTTTTCAAAAAGTTGNTTAGAAATCACAAAAATAATATTTAGA ATTGAAAATAATGAAAAAATAAAGGTAGGCAAAATTAAAGCTATAAACAA TGTGGCCAAACAAAGAGCACTTGATAAATATATGCTCAAATAGAGTGGGC TACGATAATATTCTTTGTTAACTAAAGATGTTGAAAGTCCCGTAAAAAAT TGTATTAAAGCCAAGGGTAGAATCATTGATATAGCCTATTTTAAATTATC AATCTTTAGTAATATATGAATTAACACTTAAGTTTTTAGGTTTATTTACG GAATATAACTCAAAAATTGTTTGAAAAATATCAAAAGAAAGATCCAAAAC CAAATGATTTTTTGAATAAAAATGTTTTGGAGCTTTCTACTGCATCGTCC TGCATGTTTGACAGTCGAGAATGTATAAATATATCCATGAAAGCAGTTGA AGAATGGATGAAAAATGAAACAAAAGTTCCAAAGTATATTTTTTGAAATG TATAATTAATTATTTTTAACTCTATTATTTTCAAAACAAGTGGAGATCTT TTTAAAGATTTAGTTTGTACAGCAATTCGAAATGGAAATGAATCTGTTTG GAACTTCGTTGCAAGCCAAAATGCATCTAATATCTATCAACAAGAAATTA TAATGGGTTTAGCATGCTCAAAAAATAAGTCCATCATTAAAAAGTATCTT TATTTATTTGTCAATATAATATTATTGAATCTAATAATTTAATTTATTTT ATGTAGATATTTAAACATGACTCGAGAAAACCAAACATTCAATTCCACAG CAAAAAATATTTTTGAAGAAGTCATCGAGACACAAAACGGAAGATCTTCA TTTATTGAATTTTTAAGAATTGAATATGATCGAATTATAGAGTTGTAAGT AAATTTTACGTGATGAACATAGGCTAAAACTTGTTCAGTACATTTTAGAA TGCTTAAGCTTTTTCATTTCTTTGTTAAGTTAATTGTTTAAATTTGAATT AGCTTTTGCTAAGCTATGAATAATTATTAATAAGTAAACTATAGTTAGTA GGAATTACCAACTTATTTTTTTATTTTTTTTTGAGTAAAGGGAGCCCAAA ATTGAGCTATCACACATTCTGACCCCTCAAAAATTGCGAATGGTAAATAA AAATCCGTTTTACTAAAAAAAAAAATCCCAGAGAAAATAATTTACCCCCC ACCCTTTTGTCCGGAAACGTTTCTGTATGAAGTAAAAAAAAAATAATTAT GAGATAAACTTTTTTTTTCTTATTTATAAAAAAGCTTTATGTGCTTTAAA AAATGATATTGCACGAGATGTAATTTTTTGGTAAAGNTTAAATCTCTTAC TTCTACAGCGAGATAAAAGTAGCACGCCCCAGAATTTAGTTCTAAAATAG ACGAAAAAGATAAAAATTACTTATGAAAAGGAAAAAATTCTGCAAATTTG TTATTTTTTTAATGTTATATAAGTTAGTATATAATAATGTGGATAATTAT CCTTAATCTTTGCTGTATGTTATTTTTAAACAGATTATATGGAAATATAT CAAACTGACACTTAGTTTTAAATTTCCTTAGTTTATTTCTTGATTTTAAA GTTGACCCAATGTATCCGTGTCGTTGGTTATATCCGTAAACCTTATAGGA AGCCTCTGAAACTAGTTTCACTGCCCATTCTACAGATTGGGAATGATATA TATATATTTCTATAATTGTTCTGTTCACTTTTTTATACTTTGATTGTAAA GCGAGCAATAAAACTATTCAAACACTTACAAAAAAAATATATATAGATAT ATAAATGATCTAATTAAAAAAAATATATNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNATCTTTTTTCTTCTTTTTTTAAAAATCAAA ATATTATTGTAGATATAGACCTAGTACATGAAGGGTGTTTTACTTGTTTA TAACTAACTGTTGGAAAAAAATAATCTTAGCGAATGAGACAAAAGTCAAA TAAAAATTTGTTCAAAAAAATTAAATCTTTACTTCTTTCGAGCTTTTCAG TCCAATACTATCCCCCCTCCCCCTTAATGAAAAATCCTAACCATTATTTG TAGACTCAGAACTTTTACGTCATCTTACAGTTATGGATATGTTAGTATGC TCAAGTTCTACCAATTGTTCTAACTAATTAAATTAATAAATTAGAAATTA TAATTAGAGAAAAGCTTATTATTACGCATATTCTTGTATTTATATTACAA TTAAGATTTAGGAATTTGGAAAATCCCCTTCCCCCATTATTGAAAAGTCC TTTTTAAATTTAAGATCATAATTTGTACCCCATTTTTTTGCTTTGAGTTT TCCGTTACTTTGTTCATGCCTTATTAATTGTTTTTAGCTTCTTAAATTAA TATGCACATTATTCTCATTCAACTAGAGCTTATTATTACATATATTTATT GACATATCTAGGAAAGATGGTTGGACATATTATATCACACAATTTTTATA TAAAACTTTGGAACTCTCCGATAACAAGATGCATTTTGATGAGGTAAATA CTTGTTAAATATTATTCAGTTACAACCATACTTGAACTGCATTCTTATTC GTATGTATATCTACAGGTTTCTAATTTCATTAAGGAAAAAAAAATAAAAA AGTTCTGAAGGTGTAATCAAGTTAATTGCAGAAGAATGGGAGAAGAATCA AGCTAATGTCAAAATTGTGAATGACTGGCTTCAAGAAAAGGTTATATAGT ATTTACAACATTCAACAAAGTTCAGCCCCTAATTTGAAACGATGTTTTTC ATGAATGATTTTACTGCGAAAAATATCAAAATAACCTATATAGATAAAAT TTATATTTTAATGTTCTACAGAATTTAATATTTCTTGATAGTTATTTAGA TTTAATTTTCAAGCAACAAATCTTAAATAACTTCTAAAAAATCATTTTTT AAGATGTT
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