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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1236 | supercontig | LSalAtl2s1236:74300..79874 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001399 >EMLSAP00000001399 ID=EMLSAP00000001399|Name=EMLSAP00000001399|organism=Lepeophtheirus salmonis|type=polypeptide|length=1726bp
MEGVPRLPMLKCELKRSPDNEGISSRLRELIRGRYGETGFEEEIREFETL
RAHACIRVSKDVSGIAEVKKYYAQLSFLKNRLELDPDDEEGGIPWSWYTL
YNDSNPVIVAFNDISLEMSSVLYNSGALHSILASEEPRISSEEMKMAXTH
FQCAAXAFHIIPDRCTSIRSTDIDSDVLAFLSQVCLAQAQECILEKSILD
HRKATIVAKVGAQVVDYYLQAKRKIDGSFSKNEEENIYEIVGSKLAKLWL
HYVDFKMHFYTAVSFYYMGLQSEEAQKMGERVAYLEAASNALKTASSKGK
SLVSSSXASEIFDKALIGSALSFSSDVINGKFDNAKKENEFVYHESVPDI
NTLPELKGASLVKGIGFEVTDIDISGKDIFSKLVPIEAHESSSLYSEEKA
KLLRTVGDEIEKKDSELAVFLASLSLDEIPEPGEQEYLPPELIECVAGLS
VKKDAISKLAEAMKQIDTVTCSVDSAIEQLKQVLEKEDEEEKEFQALLGE
KRTSHLNVDLKRELDTFIEARAXASESTSTLHNAMQLHLENFNLLGKPLE
ELEKIVPSMKDLDEESEHNIDDILLIYNKVKEMKSQRIFLLDKLRDEIQS
DDITKKLILYKNKDLSEVFSTELKKHDSVIQLIRTNLGAQSNILQIFADT
NAKCVDTRCTVSKLLSARKDLINSLVDSYHTYDDLLHKTAKGLQFYDKLE
SNVSKALSKAKGVVKVQSEERDALIAKNMPSPNPNFSVGPRLNNFNPVIA
SAPPNASGKPTLKDYLNAMKIQDNKQVXXATSVPQIPSQTRPLPSEQNKA
LGEEPSPISKPTSTNESKVSAPLHYSQSRATYTSGTEASNNMTLATASPQ
IQQQEQHRQYYQPPSSIAPPPNSSPFYQYPTNIPSSSSNSINKPGTEKIK
PYSHPQPSGHPSGISSYPPNQSNYYGQNYGTANTSQVPPNPQYFNSSQNQ
TYLNQIKNKDISSSDSNPPQVTEHKSNQFIVQGNYQLNKQPYPSYNHQTN
QYPYNYSMPCGEVVAPANNTLQKXLGIQYPTTLSQPYSDSSTQNLQSSAT
PAHLIQQRNPFLATTTNQMPQLMSQYPPQLNQPSSYVHTSNEANYNQSSN
LTQQQQFLTQQYGQQAYSGQIQSGYNYNHGASSVGSVNYNSYSSVPAFQT
HHPSNTGHQNSIAQSPKSNSTVSHVQNTVNNSLLQPPQQVHQQRLCYQNP
MHQYQQGGIQNPISTTATSMDNGYSGGVTPVLPSNSNNEANYKMAHVSGV
DHSNANNLPSSGMNSNFVHPLNPVPVNCTKNIDGRESSVDKILNVSPEEP
KKGNQHKGSCPDPKVLKPKVMTASDLEEEKEVAKITKEINHASAHDPFES
SENLRNTLFEETNTLESIIKDISSPNSTSFEKIWKDIKTQFEKGPVLKIS
VARCYPMKNRDADVLPYDHNRVELPSTKDDYINASHIKGLTQHSPRYIAT
QSPTSGTLSDFWTMVWQEQVETVINLVPEDTHSIFIYWPIDRKIPVKVGS
LEISLQSSKNEVPFLTEKLMTIMNNSTNTSRVVVFIQATKQVNTLSLLLD
VACLLLKYHRQQRVLTHPIVVHCQVGSGKTASVIILSSCLSEINVGSIKH
DENGLASLVPLPSGIASHLMRQRKGVLKDKESLKMVYEALLTHCQNILIK
YDLKKPSPQPLLETKREDPHDLSKIMDEISLTDSSSPIKKITKQDFLKPI
MGLNPDMKSNDPLSQLDPLWSLKLKS back to topmRNA from alignment at LSalAtl2s1236:74300..79874- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001399-697246 ID=EMLSAT00000001399-697246|Name=EMLSAT00000001399|organism=Lepeophtheirus salmonis|type=mRNA|length=5575bp|location=Sequence derived from alignment at LSalAtl2s1236:74300..79874- (Lepeophtheirus salmonis)
ATGGAAGGTGTTCCGCGATTGCCTATGCTGAAATGTGAATTGAAACGAAG
TCCTGACAATGAAGGGATTTCCTCAAGACTGCGTGAGCTCATCCGTGGTC
GCTATGGGGAAACGGGATTTGAAGAAGAGATCCGCGAGTTTGAAACGTTG
CGAGCTCATGCATGTATTCGTGTATCCAAGGACGTTTCAGGGATAGCTGA
GGTGAAAAAGTACTATGCTCAGTTGAGTTTCCTGAAAAATCGTCTGGAAC
TGGATCCCGATGATGAAGAGGGTGGGATTCCGTGGAGTTGGTACACACTC
TACAATGATTCAAATCCTGTTATTGTGGCATTTAATGACATTTCCCTTGA
AATGTCCTCCGTTCTTTACAATTCAGGTAGACACACTCAGAGTTAATCTC
GAGTTCATGCCACGAACATTTTTTGTGATTGATAGGTGCCCTACATTCCA
TCCTTGCCTCTGAGGAACCTAGGATATCCTCTGAAGAAATGAAAATGGCT
TMTACACATTTCCAATGCGCAGCCRGGGCATTCCACATCATTCCAGATCG
CTGCACTTCAATTCGCTCTACAGATATTGACTCAGATGTCTTGGCTTTCC
TATCTCAAGTTTGTCTTGCCCAAGCGCAGGAGTGCATTTTAGAGAAGAGT
ATTTTGGATCATCGAAAGGCAACGATTGTTGCTAAAGTTGGTGCACAGGT
CGTTGACTATTATCTTCAAGCCAAAAGGAAAATTGACGGCTCATTTTCAA
AAAATGAGGAAGAAAATATATACGAGATTGTTGGATCTAAATTAGCGAAG
CTATGGCTTCATTATGTGGATTTTAAAATGCATTTCTATACGGCTGTGTC
ATTTTATTATATGGGTCTTCAATCCGAAGAGGCTCAAAAAATGGGTGAAC
GAGTTGCATATTTAGAAGCTGCTTCGAATGCTCTAAAAACCGCCTCCTCC
AAAGGAAAGTCCCTGGTTTCTTCTTCGRTAGCCTCGGAAATATTTGATAA
GGCTCTTATTGGGAGTGCACTCTCCTTTTCATCCGATGTAATAAATGGCA
AATTTGACAATGCTAAAAAGGAAAATGAGTTTGTGTATCATGAGAGTGTT
CCAGACATCAATACACTACCAGAGTTGAAGGGTGCATCTTTAGTAAAGGG
TATCGGTTTTGAAGTCACAGACATAGATATTTCAGGAAAGGACATATTTT
CTAAGTTAGTTCCAATCGAGGCACATGAGTCAAGCTCATTGTACTCTGAG
GAAAAAGCAAAATTGCTCAGAACTGTAGGAGATGAGATTGAAAAGAAGGA
TAGTGAGCTTGCGGTAATTGATTTGGATATATATATCTAAATTCAATTTT
GATAATCCAATTATTGTATTTATTTTCACAGGTTTTTTTGGCATCTTTAT
CTTTAGACGAAATCCCAGAGCCTGGAGAACAGGAGTATCTTCCTCCTGAA
TTGATAGAATGTGTTGCAGGATTGAGTGTAAAAAAGGATGCTATTTCCAA
ATTAGCTGAGGCCATGAAGCAAATAGACACTGTAACTTGTAGTGTGGACT
CTGCAATCGAACAGTTGAAGCAGGTTTTAGAAAAGGAAGACGAAGAGGAA
AAGGAATTTCAGGCTCTCCTTGGTGAAAAAAGGACATCACATTTAAATGT
TGACTTAAAGAGAGAGCTTGATACTTTTATCGAAGCAAGAGCTMTAGCCT
CTGAGTCAACGTCGACTTTACACAATGCCATGCAATTGCACTTGGAAAAT
TTCAATTTGTTAGGAAAGCCATTGGAAGAACTTGAAAAAATAGTTCCGTC
CATGAAAGACTTGGATGAAGAGTCGGAACACAATATTGATGATGTATTGA
TATATTAATTAATTATAATCCAATAGAGATAGTACGATCATTATTAATCA
TTATTTTTTACTCCTACAGATTCTCCTAATATATAATAAAGTGAAAGAAA
TGAAGAGTCAACGTATTTTTCTATTGGATAAATTACGAGATGAAATACAG
AGTGATGACATTACTAAAAAATTGATACTTTATAAGAATAAAGATTTGTC
AGAAGTGTTTTCTACAGAACTAAAGAAGCATGACTCGGTGATTCAGCTTA
TCAGAACAAACTTAGGAGCTCAAAGCAATATCCTTCAAATTTTTGCAGAT
ACAAATGCAAAGTGTGTTGATACACGCTGTACTGTCTCCAAGCTTTTGAG
TGCTAGGAAGGATTTAATAAACTCTCTCGTTGACTCATATCACACATATG
ATGATCTCCTTCATAAAACAGCGAAAGGCCTTCAATTCTATGATAAATTA
GAATCAAATGTATCTAAGGCTTTAAGTAAAGCAAAAGGTGTAGTGAAAGT
GCAATCCGAAGAAAGAGATGCTCTTATAGCTAAAAATATGCCATCTCCAA
ATCCCAATTTTTCTGTTGGTCCTCGGCTGAATAATTTTAATCCAGTTATT
GCTTCTGCACCACCAAATGCATCTGGCAAACCAACATTGAAAGATTATTT
AAATGCCATGAAGATTCAAGATAATAAGCAAGTCWACKAAGCCACTTCTG
TTCCTCAAATTCCCTCACAGACTCGACCTCTTCCATCTGAACAAAATAAG
GCATTAGGTGAGGAGCCATCACCTATTTCAAAACCAACATCTACAAATGA
ATCCAAGGTATCCGCTCCTCTCCATTATTCTCAATCTCGGGCAACCTATA
CTTCTGGGACTGAAGCTTCTAATAATATGACTTTAGCTACTGCTAGTCCT
CAAATTCAACAACAAGAGCAGCATAGACAATATTATCAACCCCCCTCTTC
CATTGCTCCTCCTCCTAATTCCTCACCTTTTTATCAGTATCCCACGAACA
TTCCCAGTTCAAGTAGCAATAGTATTAATAAACCTGGAACAGAAAAAATY
AAGCCATACTCACACCCACAGCCCAGTGGGCATCCTTCTGGAATCAGTTC
TTATCCACCTAACCAAAGTAATTACTATGGTCAAAATTATGGAACTGCGA
ATACTTCCCAAGTCCCTCCTAATCCTCAGTACTTCAATAGTAGCCAAAAT
CAGACCTACTTGAATCAAATCAAGAACAAAGATATTTCATCATCAGACTC
TAATCCTCCACAAGTTACTGAACAYAAATCAAATCAGTTCATCGTCCAAG
GCAATTATCAATTGAATAARCAGCCATACCCATCTTATAATCATCAAACA
AATCAATACCCATACAATTATTCCATGCCTTGTGGTGAGGTGGTCGCACC
AGCTAATAACACGCTACAAAAGAKCCTTGGCATCCAATATCCCACAACTT
TATCACAGCCTTATAGTGATAGTAGTACTCAAAATCTTCAATCCAGTGCG
ACTCCAGCTCATCTAATACAACAACGTAATCCCTTTTTGGCAACTACCAC
TAACCAAATGCCCCAATTAATGAGCCAGTATCCACCACAGCTGAATCAGC
CCTCTTCATACGTTCATACTTCAAATGAAGCAAATTATAATCAATCATCA
AATTTAACTCAACAACAACAATTTTTAACTCAGCAATATGGTCAGCAAGC
ATACTCTGGTCAGATCCAATCCGGTTACAATTATAACCATGGAGCTTCAA
GTGTAGGGAGTGTAAATTATAATTCATATAGCTCAGTACCTGCATTTCAA
ACACATCATCCTTCGAACACAGGACATCAAAATTCTATTGCTCAGTCTCC
AAAATCCAACAGTACTGTCTCTCATGTACAGAACACAGTAAATAATTCTC
TTTTGCAACCACCGCAGCAGGTACACCAACAACGTTTGTGCTATCAAAAT
CCAATGCATCAGTATCAACAAGGAGGTATCCAAAATCCAATATCTACAAC
TGCTACCTCCATGGACAATGGTTATTCAGGAGGGGTGACCCCCGTTTTAC
CGTCAAATAGTAATAACGAAGCAAATTATAAGATGGCTCATGTATCTGGG
GTAGATCATTCAAATGCAAACAATCTACCATCATCAGGAATGAATAGTAA
TTTTGTCCATCCATTGAATCCAGTACCTGTTAATTGTACCAAAAATATTG
ATGGCAGAGAGTCAAGTGTTGACAAAATTCTGAATGTGAGTCCTGAAGAA
CCGAAAAAGGGAAATCAACATAAAGGATCATGCCCTGACCCAAAGGTTCT
CAAGCCAAAAGTAATGACTGCTTCAGATTTGGAAGAGGAAAAAGAAGTAG
CTAAAATTACTAAAGAAATCAATCATGCTAGTGCTCATGATCCTTTCGAA
TCCTCGGAAAATTTGCGGAATACTTTATTTGAGGAGACAAATACATTAGA
GTCTATCATTAAAGATATTTCATCTCCGAATTCAACTTCCTTTGAAAAAG
TATTTATTTATCTTCACTCTTATAAATGTAAATTTTAATCTAGCTTTGTT
TTTTTAATTGGAAATTAGATATGGAAAGACATTAAGACTCAGTTTGAAAA
AGGACCCGTGTTGAAAATCTCTGTGGCCAGATGTTATCCGATGAAAAATA
GAGATGCTGATGTTTTACCTTACGATCATAATCGAGTTGAATTGCCTTCA
ACCAAAGATGATTACATTAATGCCTCTCATATCAAAGGCTTAACTCAACA
TTCTCCTAGGTACATTGCTACACAATCTCCTACATCTGGTACTTTGTCAG
ATTTTTGGACTATGGTTTGGCAAGAACAGGTAAATTGAACATTTTTGGTA
TGTAAATTAGTGCATATTTTATTTTGTATTCTTTTTCGTAGGTGGAAACA
GTGATAAACTTGGTTCCAGAAGACACACACTCTATCTTTATATATTGGCC
AATAGATCGTAAAATTCCTGTTAAAGTTGGATCCCTCGAAATAAGCCTTC
AGAGTTCAAAGAACGAAGTCCCTTTCCTTACTGAAAAGTTAATGACCATC
ATGAATAATTCTACAAATACTTCGAGAGTCGTTGTTTTTATTCAAGCCAC
CAAACAGGTGGAATATAATATCGGCATGAATATTTTCCTTACTGTTCTTT
TTCGTTTTAATCAATAGGTAAATACATTGTCTCTCCTCCTGGATGTGGCA
TGTCTTCTTCTCAAGTATCATCGTCAACAAAGAGTCTTGACACATCCTAT
CGTGGTTCATTGTCAAGTTGGTTCTGGAAAGACTGCATCGGTCATTATCC
TTTCGTCATGTCTCTCGGAGATTAATGTTGGTTCCATTAAGCATGATGAA
AATGGACTTGCTTCCCTCGTACCCCTGCCGTCTGGGATAGCTAGCCATTT
AATGCGACAAAGGAAAGGAGTACTTAAAGATAAAGAGTCCCTAAAAATGG
TATATGAAGCCTTGTTAACCCACTGTCAAAATATTCTCATTAAGTATGAT
TTGAAGAAACCAAGTCCGCAACCTCTGCTTGAGACGAAAAGAGAAGACCC
ACATGATTTGAGTAAAATAATGGATGAAATCTCCCTTACAGATTCTTCTT
CCCCCATAAAGAAAATTACTAAGCAAGATTTTTTGAAACCTATAATGGGT
TTGAATCCAGACATGAAATCGAATGATCCATTGAGTCAATTAGATCCTCT
ATGGTCTCTCAAGTTAAAGTCATAG back to top
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