EMLSAT00000001420, EMLSAT00000001420-697267 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001420
Unique NameEMLSAT00000001420-697267
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1244supercontigLSalAtl2s1244:106559..109416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001420 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001420EMLSAG00000001420-684186Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006176EMLSAE00000006176-715104Lepeophtheirus salmonisexon
EMLSAE00000006177EMLSAE00000006177-715105Lepeophtheirus salmonisexon
EMLSAE00000006178EMLSAE00000006178-715106Lepeophtheirus salmonisexon
EMLSAE00000006179EMLSAE00000006179-715107Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772318auto772318Lepeophtheirus salmonispolypeptide
EMLSAP00000001420EMLSAP00000001420Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001420

>EMLSAP00000001420 ID=EMLSAP00000001420|Name=EMLSAP00000001420|organism=Lepeophtheirus salmonis|type=polypeptide|length=864bp
MNGSSASFECGVGAEVKGPASTHKVEIEDVVVEFPFQPYPVQTAYMESVI
KCLNYAKFGLLESPTGTGKTLSLLCSSLAXLQTHKVARAKLKLESGGLES
TAPATRIIYASRTHSQLTQVISEFSSTAYKHFPSAVLGSRDQLCINPAVL
NMKNIDKNILCRSKLKAKSCEYYNKYEKDIDRILSNVDPCQNDDIENLKK
MGHKQKICPYYYSRNSSSRADIVFLPYNYLFDAKIRKTLNIELDSAVIIL
DEAHNVLRNCEDANSFTFDAKDIAVAITELDYVIKIFDNESLLENLESAE
FTVPEICSLKEIIIKFENELISLRENSIQDYNGDKIHEILESSGINNENA
SEVKDILGKVFNFLTSASLVGGQAKGRGTGAISSVLNLVFQDNSNTKELL
KSYFKLHIDKNVQKNSFQSSNNKNTIFNLWCFSPGFCMKSLIETGIRSII
LTSGTLKPMDSFCSELLTDFHVKLQNNHIITNQQILVRVAPNGVDNFPLS
SAYLTRSDPKYLNSLGFSILKIFRSVPDGVLIFFPSYTVMNSCIEYWQNT
SSLWTAMQANKPIFIEPKEKGILPQVVDDYKASIRSSSGASFMAXMRGKV
SEGIDFADKDARVVIITGIPFPNVKDSRIELKRKYLDLRRGLDPTNLTGN
DWYNLEAYRAINQAIGRVIRHKNDFGAILFLDRRFSGSNVKSQLSDWIQP
GFAISDKFNTLLNEMKEFFRCNQELYKEISRPQPPKQAPSTSTIVKRPLP
ISSHVQSSSTLYPSKRKKIVIKPHTSTKVPNYTSIKEGAAQSLVLKLKKC
LSKEEMLTFKNFVKEYKTTNDFNSIKNLMKENWFRDKLSNEDKLDFQAFI
KDQHRCLYSQEINY
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mRNA from alignment at LSalAtl2s1244:106559..109416-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001420-697267 ID=EMLSAT00000001420-697267|Name=EMLSAT00000001420|organism=Lepeophtheirus salmonis|type=mRNA|length=2858bp|location=Sequence derived from alignment at LSalAtl2s1244:106559..109416- (Lepeophtheirus salmonis)
ATGAATGGTTCCTCAGCGTCTTTCGAATGTGGAGTTGGTGCTGAGGTAAA
GGGTCCTGCCTCGACCCATAAAGTAGAGATTGAGGATGTGGTTGTGGAAT
TCCCATTTCAGCCTTATCCTGTTCAAACTGCTTACATGGAATCTGTGATC
AAATGCCTTAATTATGCAAAGTTTGGTTTATTGGAGTCTCCAACGGGGAC
AGGAAAGACGCTAAGTCTTCTTTGTTCTTCATTGGCTTKGCTCCAAACCC
ATAAAGTCGCTCGAGCTAAGCTGAAATTAGAATCAGGTGGACTTGAGTCC
ACAGCTCCTGCTACACGTATAATTTATGCCTCCAGAACTCATTCGCAACT
TACACAGGTTATATCTGAGTTCTCATCGACAGCTTACAAACATTTTCCTT
CCGCCGTTTTGGGCTCGAGAGATCAACTATGTATCAATCCTGCTGTTCTT
AATATGAAAAACATTGATAAGAATATTTTATGTCGTTCAAAACTCAAGGT
ATATAAACGAAATCAATTTAACTTCGTGTAATTCCTTTTATTAATAGATC
AAATGAAATGATAAGTGTCTATTTATTTTTTATAATCTTCATGATATTAA
TTTTGTTGCTGTTGTTGAATTTGATTTTGTTCATGTAACCAGGCAAAGAG
CTGTGAATATTACAATAAGTATGAGAAAGACATCGATAGAATTTTGTCTA
ACGTCGATCCCTGTCAGAATGACGATATTGAAAATCTTAAAAAAATGGGC
CACAAACAAAAAATTTGTCCGTATTATTACTCAAGAAATTCTTCTTCGAG
AGCAGATATAGTTTTTCTACCTTACAACTACCTCTTTGATGCTAAAATTC
GAAAAACTCTCAATATCGAGTTAGATTCTGCAGTCATAATTCTTGATGAG
GCTCATAATGTGCTTCGTAATTGTGAAGATGCCAATTCTTTTACATTTGA
TGCTAAGGATATAGCTGTGGCTATCACTGAATTGGATTATGTTATCAAAA
TTTTTGACAATGAATCGCTTTTAGAAAACCTTGAATCCGCAGAATTTACA
GTGCCTGAAATTTGCTCATTGAAAGAAATTATAATCAAATTTGAAAATGA
ACTCATATCATTGCGAGAAAACTCAATACAAGACTACAACGGAGATAAGA
TTCATGAGATACTTGAAAGTTCTGGCATCAACAATGAGAATGCCTCTGAA
GTGAAAGATATTTTGGGTAAAGTCTTCAACTTTTTGACAAGTGCAAGCCT
TGTTGGAGGACAAGCAAAAGGCCGTGGGACAGGAGCTATATCTAGCGTTT
TAAACCTAGTATTTCAAGATAATTCCAACACAAAAGAACTTCTCAAGTCC
TACTTCAAACTACATATTGATAAGAATGTACAAAAGAATTCATTTCAAAG
CAGTAATAACAAAAATACAATTTTTAATTTATGGTGTTTCAGTCCAGGTT
TTTGTATGAAATCATTGATTGAAACTGGAATAAGAAGCATAATTTTAACC
AGTGGGACTCTTAAACCCATGGATTCTTTCTGTTCTGAACTGTTGACTGA
CTTTCATGTTAAACTTCAAAACAATCACATTATAACTAATCAACAAATAT
TAGTACGTGTAGCCCCAAACGGTGTTGATAATTTCCCCCTAAGTTCTGCT
TATCTAACTAGATCGGATCCCAAATATTTAAATTCCTTAGGTAAATATAT
TTAATTGTTTTTAAGCATACTGTCTTTTTGGATTATTACTTACTTTTTTT
TACCTCAGGATTTAGTATACTCAAGATATTTCGGAGCGTACCCGATGGAG
TTTTAATTTTCTTCCCATCATATACGGTCATGAATTCATGTATTGAATAT
TGGCAAAATACTTCTTCTCTTTGGACTGCTATGCAAGCAAATAAGCCTAT
TTTCATTGAACCTAAGGAAAAAGGAATTCTTCCCCAAGTCGTTGATGACT
ATAAAGCATCTATTCGTTCTTCAAGTGGAGCTAGTTTTATGGCTGKGATG
CGTGGCAAGGTGTCTGAGGGAATTGATTTTGCTGACAAAGATGCTAGAGT
TGTTATTATTACAGGAATTCCCTTTCCAAATGTAAAAGATTCTAGAATCG
AATTAAAACGAAAATATCTTGACTTAAGACGGGGTTTAGATCCAACTAAC
CTTACTGGAAACGACTGGTAAGTCAGTAGTAGTATTTATTGGTTATATTA
ATACTTTTTTTTAATTAGGTATAATTTAGAGGCCTATCGAGCAATTAACC
AGGCTATAGGACGAGTTATTAGACATAAAAACGATTTTGGTGCTATATTG
TTCCTCGATAGACGTTTCTCTGGTTCTAATGTAAAGTCTCAACTTTCTGA
TTGGATTCAACCAGGATTTGCCATCTCTGATAAATTTAATACTTTATTAA
ATGAGATGAAAGAGTTTTTTAGATGCAATCAAGAACTTTATAAAGAGATA
TCTAGACCTCAACCACCCAAACAGGCTCCTTCAACATCTACAATTGTCAA
AAGACCGTTACCCATTTCATCCCATGTACAGTCGAGTTCTACTCTGTATC
CTTCTAAAAGAAAAAAGATTGTGATTAAACCACATACGTCAACTAAAGTG
CCAAATTACACATCTATCAAAGAGGGAGCTGCTCAATCTTTAGTCTTGAA
ACTTAAAAAGTGTTTAAGTAAAGAAGAAATGTTGACATTTAAAAACTTCG
TCAAAGAGTACAAAACTACTAATGATTTCAACTCAATAAAGAATCTCATG
AAGGAAAATTGGTTTAGAGATAAGCTCTCTAATGAAGATAAATTAGACTT
TCAAGCATTTATTAAAGATCAACATCGATGTTTATATTCCCAAGAAATCA
ATTATTGA
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