EMLSAT00000001460, EMLSAT00000001460-697307 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001460
Unique NameEMLSAT00000001460-697307
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1248supercontigLSalAtl2s1248:74081..78027 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001460 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001460EMLSAG00000001460-684226Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006356EMLSAE00000006356-715284Lepeophtheirus salmonisexon
EMLSAE00000006357EMLSAE00000006357-715285Lepeophtheirus salmonisexon
EMLSAE00000006358EMLSAE00000006358-715286Lepeophtheirus salmonisexon
EMLSAE00000006359EMLSAE00000006359-715287Lepeophtheirus salmonisexon
EMLSAE00000006360EMLSAE00000006360-715288Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771437auto771437Lepeophtheirus salmonispolypeptide
EMLSAP00000001460EMLSAP00000001460Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001460

>EMLSAP00000001460 ID=EMLSAP00000001460|Name=EMLSAP00000001460|organism=Lepeophtheirus salmonis|type=polypeptide|length=980bp
MSSSIKSLFFLFWILGVYAIGLGLFNDGFLLSRKTLNTISPTSASPSPPL
YNKLILLVIDAFKYEFAYYNQNQTKKHSINQFPISHKLIKDDYGILMEAL
ADPPTTTLQRLKGLTTGSLPTFIDASSNFGSYEIQEDNLISQLVRNNKSV
VFAGDDTWLTLYPSGFKRSYPYPSFNIRDLDTVDRGVEEKLKSEIHRRDW
DVFIGHFLGVDHAGHSYGPNHSEMSRKIKEMDEIVRYVADEMSNDTVLFV
LGDHGMTITGDHGGDSRDEISSTFLIYNKKFKFQNSENTRLVNPSQIDFL
PTACLWMGLPIPFSNLGAYLPLLHDAKYNHNFIKSNVDQVMSYFDGYLSI
GSRHEFSKSKVRQLEDLFSDFKSKLKGVMSLNDFQTSQKLGFEILDHAKQ
MCQSVWAQFNLTPMGAGLSLIIIHTTAIMPLFLISTGLFSAMTALIFPNL
MFKPLLILSSGIASSVMAFGVFLLWTLRRDFKLVLKYESVVTVVFGVCLL
GLTLSNSYVVEEPFVLNFVLTSFLIFLPFTSSSNWYLQIICFFTAFLVRC
SNVYFVCREEQITNWQCTSILDFSKSIGDLPLEISRSLKNWRFFSALISV
FCVVVFSRLWLKRCGNLNGVSPVVALVKYVPSFMGLSMVSFWALNGSRLV
SKILPWQRNILSQSVFLLSILSILVILMKPFLVYYDNAEEKLKKEVPKVL
HQEASSIYNYLKMQYAKAPSSNINTVKTVYGLGTALSAPIVALLVCVSLS
SMLVLGDGLCPSIAVMLLSMVVISFVNTIDNPENSVRFSSIFLWWLAQNV
FFYASGHSTTLNSIQWSAAFVGFDGELYGKDSYIIPFILVTWNTYVSRIL
FGLALPLLFLSSYTVSLFAPFLIKNGKEEEKKKGELILLEFELSKVKSGM
LNLFIRYSVLLGLQLFFSMLSAGILRRHLMVWKIFTPKFIFEGVGFIVSS
LSLMLGYLIWCRVYGFMYKYYAKLILGGIQ
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mRNA from alignment at LSalAtl2s1248:74081..78027+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001460-697307 ID=EMLSAT00000001460-697307|Name=EMLSAT00000001460|organism=Lepeophtheirus salmonis|type=mRNA|length=3947bp|location=Sequence derived from alignment at LSalAtl2s1248:74081..78027+ (Lepeophtheirus salmonis)
ATATTTTTGGCTATATTGTAATACTCATCTTCCTGCAGACCTCGAAATAT TCTGTGATATTCCGATTCTTTATGTAAATGTTGAAAAATATAAAAGCAAG TCTTGAATTGCAATGCTGAACAGTGAATTGGAGTTAGAGAATAAGAATCC TATCGTATATGAGGTATCTAAGAACCGTAAAAATAAGAAGACGGACAAGG ACATAAACGACTCCGTCGAGGTTCCAATTGATGAAGAAGAGATTTTTGAT TACATCAGGGATATTCATGACCCGGAACATCCACTGAGGTGAGTGAGCTC GAAGTTGTGACTCTAACTTGATTTAACTCTCGCTTTGATTTTAGCTTAGA GCAACTCAACGTTGTGTCCCTTGAGAATATTAGAGTGAAGGACTCTTGTG TTTCTGTTCGCTTCACGCCCACGATTCCCCACTGCAGTTTGGCCACGCTC ATTGGACTTGCCATTAAAACCAAATTGCTACGATCTCTTCCTCTTCATTT CAAAATTGATGTTTCCATCACTCCTGGATCTCATTCCTCGGAAAAGCCCA TTAATAAGCAATTAGCAGATAAGGAAAGAGTCGCAGCGGCGTTGGAAAAT AAAGAATTGCAGCGCTCGGTTGACGAATGTCTTCATCCATAAAGTCCCTT TTTTTCTTATTCTGGATTTTGGGCGTGTATGCAATTGGGTTGGGACTATT TAATGATGGATTTCTCCTATCACGTAAAACGCTTAACACTATATCCCCAA CTTCCGCCTCTCCCTCTCCACCTCTCTACAATAAACTGATCTTGCTCGTA ATAGACGCCTTTAAATATGAATTTGCTTACTATAATCAAAATCAAACTAA GAAACACAGCATCAATCAATTTCCTATAAGTCATAAACTCATTAAAGATG ATTATGGAATACTTATGGAAGCCTTGGCTGATCCTCCAACAACTACTCTG CAGGTAGCTATTTCATGTTATGCGTTTAATTTAGAGATCTTTACTAATAT ATATTTTAATTTAAGAGACTTAAGGGGCTAACAACGGGTAGTCTTCCAAC TTTTATTGATGCATCTAGTAATTTCGGGTCATATGAAATCCAGGAAGATA ATTTAATTAGCCAATTAGTCCGCAATAATAAGTCAGTAGTATTTGCTGGG GATGATACATGGCTAACATTATATCCCAGTGGTTTCAAAAGAAGTTATCC TTATCCATCATTTAATATAAGAGATTTAGATACTGTAGACCGTGGCGTAG AAGAAAAATTAAAGTCTGAAATTCACCGTCGCGATTGGGATGTTTTCATT GGGCATTTCCTTGGAGTGGATCATGCGGGGCATTCATATGGGCCAAACCA TTCTGAAATGTCTCGGAAAATTAAAGAAATGGATGAAATTGTGAGATATG TCGCAGATGAGATGTCAAATGATACTGTACTTTTTGTTTTGGGAGACCAC GGAATGACTATAACTGGAGATCATGGAGGTGATTCACGGGATGAAATTTC TTCAACTTTCCTTATCTATAACAAAAAGTTTAAGTTTCAAAACTCTGAAA ATACTCGTCTAGTAAATCCTTCACAAATTGACTTCTTACCAACAGCTTGT CTTTGGATGGGTCTCCCAATTCCATTTTCTAACTTAGGAGCATATCTTCC TCTCCTTCATGATGCAAAATATAACCACAATTTTATTAAATCAAATGTCG ACCAAGTCATGTCCTACTTTGATGGATATTTATCAATTGGCTCTCGTCAT GAATTTTCAAAGTCAAAGGTGCGTCAATTAGAAGACTTGTTTAGTGACTT TAAATCTAAATTAAAAGGAGTAATGAGTTTAAATGATTTCCAAACATCTC AGAAGTTGGGGTTTGAAATTTTGGACCATGCCAAACAGATGTGTCAAAGT GTTTGGGCTCAATTCAATTTAACACCCATGGGAGCAGGCTTATCTCTCAT AATCATTCACACAACTGCAATAATGCCTTTGTTTTTGATTAGTGGCTTAG ATTTCCAAANGAGTGATGGAAAAAGAGTTTATTACATTATTAGTAATATC TGGATTAATAGGCACTGGKTTATTTTCTGCAATGACAGCCCTTATTTTTC CTAATTTAATGTTTAAACCATTACTAATTCTATCATCTGGTATTGCTTCA TCAGTTATGGCGTTTGGAGTTTTTTTACTTTGGACTTTAAGGAGAGATTT TAAGTTAGTCTTGAAATATGAGTCTGTGGTAACAGTGGTATTTGGAGTAT GTTTACTGGGACTCACTCTGTCTAATTCTTATGTTGTGGAAGAGCCTTTT GTTCTAAATTTTGTATTGACTAGTTTTTTGATATTTCTTCCGTTTACTTC TTCATCTAATTGGTATCTACAAATAATTTGCTTCTTTACTGCATTTTTGG TAAGATGTTCGAATGTATATTTTGTTTGTCGTGAAGAGCAAATAACAAAT TGGCAATGCACATCGATCTTGGATTTTTCAAAATCTATTGGCGATCTACC TCTTGAGATTTCGAGAAGTCTTAAAAACTGGAGATTTTTTTCTGCGCTTA TATCTGTTTTTTGCGTTGTGGTATTTTCACGATTATGGCTAAAAAGATGT GGAAATTTGAATGGTGTATCCCCAGTTGTTGCCTTAGTCAAATATGTACC ATCATTTATGGGGTTAAGTATGGTCAGTTTTTGGGCTCTTAATGGTTCTC GCCTTGTCTCAAAAATTCTACCTTGGCAGCGGAATATACTCTCACAATCT GTGTTTCTTCTATCTATACTTTCTATCTTGGTGATTTTAATGAAACCCTT TTTAGTGTACTACGACAATGCAGAAGAGAAATTAAAAAAAGAGGTACCGA AAGTCCTACATCAAGAAGCTTCCTCAATCTATAACTACTTAAAAATGCAG TATGCAAAAGCGCCATCGTCAAATATTAATACTGTCAAAACGGTATATGG TCTTGGAACTGCCTTAAGTGCTCCTATTGTCGCACTATTAGTATGTGTAT CCTTGTCATCAATGCTAGTACTGGGAGACGGATTGTGCCCATCTATTGCG GTCATGCTTTTGTCTATGGTGGTAATATCATTTGTTAATACCATTGATAA TCCAGGTAATGTTCCTCATATAAGTTAAGATCACCTTTTTATTAATTTTA ATATAATATTTCAGAAAATTCCGTCCGTTTTTCTTCAATATTCCTCTGGT GGTTGGCGCAAAATGTATTTTTCTATGCATCTGGGCATTCTACAACCCTT AATTCTATTCAATGGAGTGCTGCATTTGTTGGTTTCGATGGTGAATTGTA CGGAAAAGATAGCTACATCATTCCTTTTATCCTTGTTACATGGAATACCT ATGTCTCGAGAATTTTATTTGGCTTAGCATTACCTCTTCTATTTTTGTCA TCGTACACGGTATCCTTATTTGCACCATTTCTTATAAAAAATGGTAAAGA AGAAGAAAAGAAAAAAGGTGAATTAATTCTTTTGGAGTTTGAACTGAGTA AAGTCAAAAGTGGAATGCTCAATCTTTTTATTCGATATTCGGTCCTTTTG GGTTTACAGTTATTTTTTTCTATGTTATCAGCTGGTATTCTCCGACGTCA TCTAATGGTGTGGAAAATATTTACTCCTAAATTTATTTTTGAGGGAGTTG GGTTTATTGTTTCATCCCTTAGCTTGATGTTAGGATATCTAATTTGGTGT CGTGTTTATGGATTTATGTACAAATATTATGCCAAGCTCATTCTTGGTGG AATACAATAAACAATTATTTTCTATATTAGTCAATAGTAATTCTGAAATA TACATTACTGATGCATGAATTTTGTGTTTTTATAAAGAATGTTAGTTATT CGTTGAAATTAAGTTATTGCCCCCTAATATAGTGTTTTTCCTATACTCAG ATGAAAATGTAGTGCTATATGTTATAGTCTGTATTATGCTATTTGGC
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