EMLSAT00000001475, EMLSAT00000001475-697322 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001475
Unique NameEMLSAT00000001475-697322
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1250supercontigLSalAtl2s1250:107150..108544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001475 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001475EMLSAG00000001475-684241Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006435EMLSAE00000006435-715363Lepeophtheirus salmonisexon
EMLSAE00000006436EMLSAE00000006436-715364Lepeophtheirus salmonisexon
EMLSAE00000006437EMLSAE00000006437-715365Lepeophtheirus salmonisexon
EMLSAE00000006438EMLSAE00000006438-715366Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772325auto772325Lepeophtheirus salmonispolypeptide
EMLSAP00000001475EMLSAP00000001475Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001475

>EMLSAP00000001475 ID=EMLSAP00000001475|Name=EMLSAP00000001475|organism=Lepeophtheirus salmonis|type=polypeptide|length=398bp
FCKVKAEGKDPCGRERGGKRGGGXENLYLTSHEEKAHRHFYSKKIPNTPL
EIIITTMEDVELRNVSSNTPLTRSLLAKPGDYEERKIETDKGSVLVALKG
DPSQPALVTYHDLGXNYVSNFQAFFNYPDMAXXLRKFYIVHINAPGQEEG
AEVYPDTFKYPSLEELAEQINEILNNLKIVKYIGLGVGLGGNILLRHAKD
YPERIEGLMLISTVCTTAGWXEWGYQKWNISYMRSHGITQSVVDYLMWHH
FGYNPAERPSDLTNVFKHYFENDVQPVNLAKLCEQYIWRTQINIDRDISL
QNITNNNNNTTKEDKLIENKSLQVPTLNICGAYNPFIEETVTLNSKLSPD
KSSWMKIQDCGMAIEEQPAKVSEAFRLFLQGLGFCLSIRKTSSVGVVS
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mRNA from alignment at LSalAtl2s1250:107150..108544+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001475-697322 ID=EMLSAT00000001475-697322|Name=EMLSAT00000001475|organism=Lepeophtheirus salmonis|type=mRNA|length=1395bp|location=Sequence derived from alignment at LSalAtl2s1250:107150..108544+ (Lepeophtheirus salmonis)
TTTTGTAAAGTGAAAGCCGAGGGAAAGGATCCTTGTGGGAGAGAGAGAGG
GGGAAAAAGAGGGGGGGGGGYGGAGAATTTGTATCTTACGAGTCATGAAG
AAAAGGCTCACAGACATTTTTATAGTAAAAAAATTCCCAACACACCCTTA
GAAATTATCATCACCACTATGGAAGACGTAGAATTAAGAAATGTATCATC
GAATACTCCTCTAACAAGGTCACTCTTAGCAAAGCCTGGAGATTATGAAG
AAAGAAAGATCGAAACAGATAAAGGATCCGTCCTAGTAGCCCTTAAAGGA
GATCCTAGTCAACCTGCACTCGTTACATACCATGACTTGGGGKTTAATTA
TGTTTCAAACTTTCAAGTAAGGGCTCAAAGATATTTTCCTTTGTTCATTA
AGTGGTATTCTTCGTTATTTCAAGGCATTCTTTAATTATCCGGATATGGC
GGYGMTGTTAAGAAAGTTTTATATAGTCCATATAAATGCTCCGGGTCAAG
AGGAAGGAGCTGAAGTATATCCTGATACATTCAAGTACCCATCTTTGGAA
GAACTCGCCGAACAAATTAATGAAATTCTTAACAATCTCAAAATTGTCAA
GTATATTGGCCTAGGGGTTGGCCTTGGAGGAAATATACTTTTGAGACATG
CTAAAGATTATCCGGAGCGAATTGAAGGCTTAATGCTTATAAGCACTGTA
TGTACAACGGCAGGYTGGYTTGAGTGGGGSTATCAAAAGTGGAATATAAG
TTATATGCGATCCCATGGTATCACCCAGGTATAGTATAATTATAATCCAA
GCCCCATTTTTGTACTATATAGAAAATTAATTAATTAACATTTTAAAAAA
TCAATAGTCAGTTGTTGATTACTTAATGTGGCATCACTTTGGATATAATC
CAGCTGAGAGACCGAGTGATTTAACAAATGTATTCAAACATTACTTTGAA
AATGATGTACAACCCGTGAATCTAGCCAAACTTTGTGAACAGTATATTTG
GAGAACTCAAATTAACATTGATCGAGATATATCCCTTCAAAATATTACTA
ATAACAATAATAACACCACAAAAGAAGATAAACTCATTGAGAACAAATCT
CTTCAGGTAGAGTAAACAATATAATTAATTATTAGAAGGACATATGAATA
AGTGTGATTTATGTTAGGTTCCGACTCTCAACATATGTGGAGCGTATAAT
CCATTTATTGAGGAAACAGTGACTCTGAATAGCAAGTTAAGCCCGGATAA
AAGTAGTTGGATGAAAATACAGGACTGCGGAATGGCAATTGAAGAACAAC
CTGCCAAAGTCTCGGAAGCATTTAGACTATTTTTGCAGGGGTTAGGATTT
TGTTTGAGTATTAGAAAAACTTCATCAGTTGGAGTGGTATCATAG
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