EMLSAT00000001479, EMLSAT00000001479-697326 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001479
Unique NameEMLSAT00000001479-697326
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1251supercontigLSalAtl2s1251:119741..120448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001479 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001479EMLSAG00000001479-684245Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006446EMLSAE00000006446-715374Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772630auto772630Lepeophtheirus salmonispolypeptide
polypeptide-auto772632auto772632Lepeophtheirus salmonispolypeptide
EMLSAP00000001479EMLSAP00000001479Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001479

>EMLSAP00000001479 ID=EMLSAP00000001479|Name=EMLSAP00000001479|organism=Lepeophtheirus salmonis|type=polypeptide|length=235bp
MKTLFVTVLFIGLSFGIPRQSEDVISYSAKLYSETGFTGYSTEIRDYVKD
LSTHNFEDFSKSAIINGVWIFYENTDYNQFEFGKRSFYGWGKDHKISSFG
QLNRALSSVRYSGAGENMKYSTINFYEGSGFMGNEQYFYSDTPSLNHDNF
GESIIVTGCDPWTLYEERSYRGDRICVXPASTQKCEPGFYIQPQDFGHFV
NKVSSVRKGCFSKKVFKGVGVPANSTRMFTPKQQH
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mRNA from alignment at LSalAtl2s1251:119741..120448+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001479-697326 ID=EMLSAT00000001479-697326|Name=EMLSAT00000001479|organism=Lepeophtheirus salmonis|type=mRNA|length=708bp|location=Sequence derived from alignment at LSalAtl2s1251:119741..120448+ (Lepeophtheirus salmonis)
ATGAAAACACTCTTTGTGACCGTCTTATTTATTGGACTTTCGTTCGGAAT
TCCAAGACAGAGTGAGGACGTAATATCTTACTCTGCAAAATTATATTCGG
AAACAGGATTTACGGGGTACAGCACAGAAATTAGAGATTACGTTAAAGAT
TTGTCTACACATAACTTTGAAGATTTTTCCAAATCTGCAATCATCAATGG
AGTTTGGATTTTCTACGAGAATACAGATTATAACCAATTCGAATTTGGAA
AACGCTCATTCTACGGTTGGGGAAAGGATCACAAGATCTCATCTTTTGGA
CAGCTCAATCGGGCCTTATCATCAGTCCGTTATTCCGGAGCAGGGGAAAA
CATGAAATATAGCACAATCAATTTTTATGAAGGATCTGGATTCATGGGTA
ACGAGCAATATTTTTACTCCGACACTCCCTCTTTAAATCACGACAATTTT
GGAGAATCCATCATTGTTACCGGATGCGATCCATGGACTTTATATGAAGA
AAGATCATACAGGGGCGATAGAATTTGTGTTTMCCCTGCCTCTACTCAAA
AATGTGAACCTGGATTTTACATTCAACCTCAGGACTTTGGTCATTTTGTA
AATAAGGTATCCAGTGTACGAAAGGGATGCTTCTCCAAAAAAGTTTTCAA
AGGAGTTGGTGTTCCAGCAAACTCAACAAGAATGTTTACACCAAAACAAC
AACACTAA
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