EMLSAT00000001500, EMLSAT00000001500-697347 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001500
Unique NameEMLSAT00000001500-697347
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1258supercontigLSalAtl2s1258:34385..35961 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001500 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001500EMLSAG00000001500-684266Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006529EMLSAE00000006529-715457Lepeophtheirus salmonisexon
EMLSAE00000006530EMLSAE00000006530-715458Lepeophtheirus salmonisexon
EMLSAE00000006531EMLSAE00000006531-715459Lepeophtheirus salmonisexon
EMLSAE00000006532EMLSAE00000006532-715460Lepeophtheirus salmonisexon
EMLSAE00000006533EMLSAE00000006533-715461Lepeophtheirus salmonisexon
EMLSAE00000006534EMLSAE00000006534-715462Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770050auto770050Lepeophtheirus salmonispolypeptide
EMLSAP00000001500EMLSAP00000001500Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001500

>EMLSAP00000001500 ID=EMLSAP00000001500|Name=EMLSAP00000001500|organism=Lepeophtheirus salmonis|type=polypeptide|length=297bp
IHTYIPTGALGLFNIIRFSNDECETLSSTDAARRQGXCMRTNECETQRGE
ADGGCAAGFGVCCVLSVSNCGGSITRNTTYIQNPGFPSKFVRSDTTTCTY
NIPRSMEGICSIRLDFNTLRIRNASPNDGDCGNEFFTARPGTGAIVPNFC
GVLSGQHNGCLQYYFGIAGTITNYNFGTLLQNTAYNMCIRREIGFCKVLY
TVDDTSKSVNPFGLGKSTSSKTSTGLCNEAQLQIPSTISANKDNVYCGDT
LSTRDGNDVNAAITSDITPFLVRLMTRKGQKISGSTGFKLQYVQLPC
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mRNA from alignment at LSalAtl2s1258:34385..35961+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001500-697347 ID=EMLSAT00000001500-697347|Name=EMLSAT00000001500|organism=Lepeophtheirus salmonis|type=mRNA|length=1577bp|location=Sequence derived from alignment at LSalAtl2s1258:34385..35961+ (Lepeophtheirus salmonis)
ATACATACATATATTCCTACAGGGGCTTTGGGTCTGTTTAACATCATTCG ATTCTCAAACGATGAGTGTGAGACTCTTTCCTCTACGGATGCTGCACGAA GACAAGGAGMTTGTATGCGTACTAATGAATGTGAAACACAACGTGGAGAA GCAGATGGAGGCTGTGCCGCAGGTTTTGGAGTTTGTTGTGTTCTAAGTGT AAGCAACTGTGGAGGATCCATAACACGCGTAAGTTGAGCGAGCTAGTTAT TGTGCAAATTCATCATCATTATTTACAGAACACAACATATATTCAAAATC CTGGATTCCCATCAAAATTTGTTAGAAGTGACACCACAACTTGCACATAC AATATTCCTCGTAGTATGGAAGGTATCTGCAGTATTAGATTAGACTTTAA TACTCTCCGGATTCGAAATGCATCTCCCAATGATGGAGACTGTGGAAATG AATTTTTCACGGCACGTCCCGGAACAGGAGCAATTGTTCCCAACTTTTGT GGTGTATTGAGTGGACAGCACAGTAAGTCAATATTCTGATATGTTTATAG TTTTAGTATTGTATATATGTACACTTATAAATGTCATTCTTAAGTGTACT TGTCAAGTGGAACGGAAGGAGATCTTGGATCTATCACCTTTAACTTTGAT CCTAACTCTGATGTTTCAAGAATGTGGGACATTAAGGTTGCAATGATTCC ATGCTACTCCAGAGTGGTGTAAGATTAGTTAGTTAAACAACTTTTTTAAA TCTACAGTGTTTTTTCTTTTTAATTTAGTCCTCCAGACGGCTGTCTGCAA TATTATTTCGGTATCGCTGGAACCATCACAAACTACAATTTTGGAACTCT TTTGCAAAACACAGCTTATAACATGTGTATTCGACGTGAAATAGGATTTT GTAAAGTGTTGTACACTGTAGACGACACTTCCAAATCTGTAAATCCCTTT GGTCTTGGCAAATCTACATCATCAAAGGTGTGTTTATGAGTCCCTTTGGC TTACCTTGGTTGTGTATATAACTTTTTTCTTTTTCTTTTTCCAGACCTCA ACCGGTGAGTGGGCATTAGGCAATCTTTTGTTGAGGATTCCTTAAGTTGA CTATAATCCCCTTTTCTTGTCTATTAAAAACAAAAAACCTAACTTTCAAT TTCTATAGGTCTCTGCAACGAAGCTCAACTCCAAATCCCAAGTACGATCT CAGCAAACAAGGACAATGTCTATTGTGGAGACACTTTGAGCACTAGGGAT GGTAATGACGTCAATGCTGCCATTACAAGTAAGGATCTAAATGTATTATA AGTTTTCTTTATAAATGTATTTTCATCCATTTGTAGGTGATATAACTCCT TTTTTGGTCCGTTTAATGACACGAAAAGGACAAAAAATCTCAGGGTCCAC CGGCTTCAAGCTTCAATATGTTCAACTTCCTTGCTAGTAAAAAATAGCAA AACTCCTTTTTCATAGAAACGGAAACATATATATAAATACTATGTATTTG AATCTTTTTATACTATTGTTAGCTTTTTATATTTAATAAATATATGTTAT TCATTCATGGTAGACATTAAAATCGGC
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