EMLSAT00000001509, EMLSAT00000001509-697356 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001509
Unique NameEMLSAT00000001509-697356
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s125supercontigLSalAtl2s125:284440..286103 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001509 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001509EMLSAG00000001509-684275Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006579EMLSAE00000006579-715507Lepeophtheirus salmonisexon
EMLSAE00000006580EMLSAE00000006580-715508Lepeophtheirus salmonisexon
EMLSAE00000006581EMLSAE00000006581-715509Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775826auto775826Lepeophtheirus salmonispolypeptide
EMLSAP00000001509EMLSAP00000001509Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001509

>EMLSAP00000001509 ID=EMLSAP00000001509|Name=EMLSAP00000001509|organism=Lepeophtheirus salmonis|type=polypeptide|length=166bp
MKNQIIYSITIFVLTAIVALSNCDDQLQKITRKAKGRGFNITCQNGPIEC
FGNKIHACAIYYVQLPILSDYIVCMMKKSGSPIAASKACSKXISIRSERI
EKCSYTYEGDKLLYLHGNQTKALTPELISVPTVELNGSQDNQYALINDLK
ASVCSAYKGVKPSVCT
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mRNA from alignment at LSalAtl2s125:284440..286103+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001509-697356 ID=EMLSAT00000001509-697356|Name=EMLSAT00000001509|organism=Lepeophtheirus salmonis|type=mRNA|length=1664bp|location=Sequence derived from alignment at LSalAtl2s125:284440..286103+ (Lepeophtheirus salmonis)
AAAAAGGCATGGATTTCGAAGTCCAAAGATTAGTTTCAATTCTGATCTCA
AGGTGAGGAAACATTAATATATTTATTGGATATTAAAGATTAATTTATAG
CGTTATCACTTTATTATAGATGAAGAATCAAATTATCTACTCCATAACAA
TTTTTGTTCTTACTGCAATTGTTGCCCTAAGCAATTGTGATGATCAACTT
CAAAAGGTACCTATTTTGTTCATATTCCCATGTATTATATAAATATATTG
NCTTTATTCTTGCTTGAACTTTAAAGGGAGCCTCCAAAGTGGAAATATCC
GTATACTATGAGACATTGTGCCCGGATTGCAAAAAATACATTATTGAAAC
TTTGGAACCAACCTATAAATTACTACAAGACATCATGGTTGTGCGATTTG
TACCATACGGAAAAGCAAAAGTACGTGGCTATACCTAGTGATGAAAATCG
TGTTTATTTTGAGCATAGTTAAAAAAAAAATAAACCCAAAATCAAAATGG
CAACCCTGACAAATTGAAGAAGGTTTTGAAGGAGAGAGGCTTAGACATCC
TTACGTTTCATTAGAACCGCTACAAACAGCTGTAGTGAGGGAGAGAATGA
AACAAACAAGGACATAGGCAAAAAATACTCTAATATCGATCCTCAATTGT
ACTATGAGTTCAACAAGGACTTACAATTATAACTCTGTAACAAATCTTCA
CTGTTACTCTCTGTCTTTCATGAGCACATACGAATGTTCAATCAGGTTTT
GAATATAATTGAATGTAATAGGAAAGGAAGTTCTCTACTCTACAGTTGAA
TAATAATGACAACAGCCGCGGGAAAGAAAATTCATTCTTCATATTTCCAA
TTCCAAAAAAGGGGCAGCTAAAAAATAAATACGACTTACATCACTAATTA
AACTTACATATTTTATTATTCTTTACTAATCTTTTGCTGTTTTTATTACA
CTTTTAAAGATTACCCGTAAGGCTAAAGGACGTGGCTTCAATATTACTTG
TCAAAATGGTCCAATAGAATGTTTTGGAAATAAGATTCATGCATGTGCGA
TTTACTATGTCCAATTACCAATTCTTTCCGACTACATCGTCTGCATGATG
AAAAAAAGCGGTTCCCCAATCGCGGCTAGTAAAGCTTGTTCCAAGAGKAT
TTCTATTCGATCGGAAAGAATAGAAAAGTGTTCATATACTTATGAAGGTG
ATAAGCTTCTTTATCTGCATGGAAATCAAACGAAAGCCTTGACTCCTGAA
CTGATTTCTGTACCCACTGTAGAACTTAATGGGAGTCAGGACAATCAATA
CGCTTTGATTAATGATTTAAAAGCCAGTGTGTGTTCTGCATATAAAGGAG
TGAAGCCCTCAGTGTGTACTTAAACGAAAACTACGTTTAACGAGATTATT
TATCAAATAACTTAAATGAATAAAATCGTTCTTCATAAAATGATATTGTT
TATTCTTAGTGTTTTGTTCCGGTCTGGGAATTCTAAACTTGCCTGAGACC
AGTGTAATTTTTGATGGACTGAAGTAATTCGGTACATAAAAAAAATATAA
AAATAGATGTTGATCAGTAAAATTTGTTTATGTTTATTAAAAGAAAGGGT
CTGCATTGGAAAAATAAGTGAAGTTATACCGAGTGGTCCATTAAAATCTG
ACCACTTTGAATTT
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