EMLSAT00000001531, EMLSAT00000001531-697378 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001531
Unique Name	EMLSAT00000001531-697378
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1264	supercontig	LSalAtl2s1264:43928..52914 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001531 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001531	EMLSAG00000001531-684297	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000006697	EMLSAE00000006697-715625	Lepeophtheirus salmonis	exon
EMLSAE00000006698	EMLSAE00000006698-715626	Lepeophtheirus salmonis	exon
EMLSAE00000006699	EMLSAE00000006699-715627	Lepeophtheirus salmonis	exon
EMLSAE00000006700	EMLSAE00000006700-715628	Lepeophtheirus salmonis	exon
EMLSAE00000006701	EMLSAE00000006701-715629	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto770442	auto770442	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001531	EMLSAP00000001531	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1264:43928..52914-

protein sequence of EMLSAP00000001531

>EMLSAP00000001531 ID=EMLSAP00000001531|Name=EMLSAP00000001531|organism=Lepeophtheirus salmonis|type=polypeptide|length=367bp
MRHKWTREILHHNQILLPWSTRNITSVPTNGHLKKTSRQNEVEDYAEKNS
MGFFEVSPLVNFNISESFIELARMALKRNGIEKLWRLNKVSSLYELXADT
IVNRTSVYFAVKWPLGEKRIQKGLISGTIIFSILFNIPKFYELRTEYVYN
NETKTHDAYIQPSDLRNNIYYSTYYIFWSKFLLIEFIPYIILIVLNTSIM
KTTHRAMVDRQRLGVQINQSQQLSKDEAQMSKILLTIVVGQCPSTPFIDG
IIHLSHFFLAVNSSINFIIYIFRGSKFRKVFAQKFYRNKNSSSFEVRPST
VRTNIFDERVSNNPHSNPSSLHALSTQTFSSSKNVAKTPNNTTTSVYKNR
SRNGKAYFTEVMRQTYV

mRNA from alignment at LSalAtl2s1264:43928..52914-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001531-697378 ID=EMLSAT00000001531-697378|Name=EMLSAT00000001531|organism=Lepeophtheirus salmonis|type=mRNA|length=8987bp|location=Sequence derived from alignment at LSalAtl2s1264:43928..52914- (Lepeophtheirus salmonis)
ATGAGACACAAGTGGACAAGGGAGATTCTGCACCATAATCAGATCTTACT
CCCGTGGAGCACAAGGAATATTACTAGTGTACCAACAAATGGTCATTTGA
AGGTATCAATCACTGGTTAAAAGAAGTGAATGATCATGCTCCTGGAATTC
CTAAGATATTTTAATAGGAAATAGATTGCACTTAGCTTTTAGAAGACAAG
TCGACAAAATGAAGTTGAGGACTACGCCGAGAAAAACTCCATGGGATTTT
TCGAAGTCTCTCCTCTAGTTAATTTTAACATATCAGAAAGTTTTATTGAG
TTAGCTCGAATGGCCCTCAAACGAAACGGAATCGAGAAATTATGGAGGTT
AAATAAAGTTTCTTCTTTGTACGAACTCTGKGCAGACACCATTGTCAATC
GAACATCAGTGTACGGAATAGATTAACTTCCATTGACTCAAAGTGTTCAA
CAAAATCTCAAATCCTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCT
CTTTTGTGGGTTCTGGCTCTTACAAGTCTTTAACAATTAACAAACGAAGA
TCTCGMCCTTTAAACTATCATAATAGAACACCTGCTGATACTACAAAAGC
GGAATTAGGAAGAAAGTTCCACATCATTATTTAAAAATTAACTATAGTTT
TGTCCAATGTGTTGATCTTTTTTGAAATTACATTTTATAAGACTAAAAAA
AAAAAAAATAATTCACTAAAGAGAAAATTATAATATACAAATGAATTTCA
AACCTTCATTTTACAATTATACATATTTATATACTATGATTATTAGTATT
TATTTTTTTATTTTATATGCAAATCTACTTGTTTTATAGCAGACATTTTT
GTCTTGCTTGATGGTATGAGTGAAATTAGTTCGATAAAAATAATAGTAAA
TTATTTGTGTAAAGTCTATATTATGTTAAGACATTAACTTTGTTGCAAAG
TGTTTATTAATATAATATACGTATACTCCTATATGATTTTTACCTTAAAA
AAAAAAGAGTAGTTTATCAAATCTTGAAACCTAGCTTTACTGATGAGTAT
TTTAGTCTTTAGAGCTTTCACAAATAAAAACGAATAAAATTCTTTTGTTA
TACATACACGCATGCAATATTTCATTAATGCGACTACATTATTATTTCTT
ATATATAAAATGTTAATATGATTTACATCCAAGATTACTATATACAGTGC
ACCCTGTATACACTTTTGAATGTATACATATATTGGTTAATATAGCATAA
AAATAAATAACATAAAAAATTTGAAAGGGTGTACATATGCATAACAATAA
ATAAAAAATATTGCAGGCGTGTGAATATTTCATAAATACGATTACTTTTT
AATTCCTTAGATCAAAATAAATTTATTATTATATATATAATGGAGCACTA
TATACAGTGCACCCAGTGACTTGTTTTCCTGTATACATACATTCATACAT
ACACAAACCCAAGCTTGGCTTTATTAATATAGATAAAATAGTACAAAGCA
AAAGGTGGAATACAAACCAAATGGTGTTTTTATTTTCATTTTTTTACAAA
GTACAATCAATTTATTCCTTTGTAAAAAATAGATAGTTTACTCTGGCAAC
ATTACAATCAACATTTTAAGGCCGTTGATTTCAAGTAATTTTCTACAAAG
TTGTGTCTTTAGTGTTATTATTTATACTTAAATTGTTAAGGTTAGTGGGG
AGAATGCTATTTAAGGGGTATTACTAAGTTCTAGAATGTCTAYTTCAGCT
CCGATTTGAATTGCTAAAAAAAAAAAAACTTCCATTCCAAGAAATAATAT
TTTTTTTTTCTTATTTAGATACTTTGCTGTGAAATGGCCGTTGGGMGAAA
AACGCATACAAAAGGGACTTATTAGTGGTACCATTATATTTTCAATTCTC
TTCAACATACCAAAATTCTACGAGCTAAGAACTGAATACGTCTATAATAA
TGAAACAAAAACTCATGATGCATATATACAACCAAGCGATCTCAGGAATA
ATATTTATTACAGGTAAATCAAATCATTAAATATGAAGTACATAAGTACT
CTAGGGGAATTTTATAATAGAATAAATTACAGGAAAAATAATTCTGATAT
AATTGAATGTTTCAATTGCGAACCTAAAAAGATATTTCAGGGTGTACCGA
TATTAGGGTAATTCAAAGGAACGGTAATAGGAAGTTTATTTTTGAAATTA
CGACAGTTAAACTTTGTACATATAATTTTCTGCAACATATCAAAAAAAAA
ATTTAAACAAATTCTGCAAACAGTTAAAACAGTACTTCACAGTTGCCGTC
AAATCTGAGGAAAGTCTTTGACAGCAGCACAGACAACTTGATGACCGATT
TGGTCCCATGCCTTAACCAGGAAAGCCTTCAAACATAGGATTGTTTTTTA
AAGTCATTTAGTGTAATTCCTTCTCTATGGACGACTAAGACGTGAACATA
TGTTCATTGAGTTCAAGAGAATATTTTATCCCGAATACGTTTCCACTGAA
CTACGTCGTTCCATTAAATAATTTTTAATGTCCGAATTTGTTTAAATGTA
TTCACTTTTTTTATTATTTGTCCACAAAACCTTATTCGTTCAATTAACTT
TACAATATTTCAAAAAAAATTAATATTTGGTATCTATAGAAAAAAAATTA
TCACAGTTGTCAAAAAATCCGACATCCTCCATACCTAAAGAGAAATCGTA
GTCAAAAACCCCAAAAATTCTTGCTAACACCCTTGATGACGTTTTCATTT
TATAATTTGACCCCCCCCCCCCCCCCCCACTGCAAATACATTCTGGCTCC
TGTGGTATGTCTGCACAAATAATTTTATGCAAGTTATCTCAGTATTTGAC
CATAAATTCTCATTATTTTCCAAATATCGTTATAATTATACTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAAGAGTGCGAAAA
AACTGTTAAAAGCTGAACACACTTGCTACATTTTTGGTTTTAATAGATGA
GTAATTAAAAAAATTTAATCTCTTTCATTTTTTAAATTGCTGATTTCGTA
TTTATTATTTATATATTGGATTTTAAATATCAGTAGTAATTGTCAACTTC
TCCTGATTACACATGAAAAAAAAATCTACCTTCTTTGGGCCCTATGAATG
AGATAATATGCACCTGATTATTTCTATCCCGAGAGACTAAACATGGCTTC
TTGTTTTGTAGCCTACACAAGTTTTTTTGAATAATATTTCCTCCTTCAGC
AGCATGGCTTATTGTTATTTTTCACCTTGAAAGGTCTAAAGCAAAGAAAA
AAACATAAATTTAGTTTGAAAGTACAACCCTCGAGAGTCAAAATTATTTT
NNNNNNNNGATCTTCTTCATAATCGAAGAAAATGTATTTTAATTAAATAT
AAATGAGGGTTCACAATAAAACAAAAATTTTATGTTTAAAATTATATAAG
ATTTGTTGCTTGAAAAAATATTTTCTTATATTAATGAAGCTATGAAGAGT
TATTGATGGTCTATAAAATGTTGTTCACCGTAACAAAAACAGACATTTCG
GTTCATAAAGGAAATTTTAATGTTCTCAAGGTAAAAAAAAAACATCCTCT
TAATTGAAGGTCAAAAATTTGTTGACCCATGTAATCGATTAATCTATCAC
TGTATATAATTGGTAGAACAGTATGTTTTTTTTATTTCATCTATCAGTTA
TCCTTTTTTTATCTTTCTCCAAAAAATCGGTATTGGTTAGGCTATTTTTT
AAATATTAAGTTACTGGGTAATCTCATTCAAGTTGATGATTACTGAATGT
AAAAAAGTTTGATGTGATTAGTTGGTAAAAGGACAACTATATTCAAGATA
TGTGGCCTGTTAACACAAAAGGAAAAATTGATTGGAAATTTCATTTAGAA
TCTTCTATTATTGTCAACTTATTCCAACAAATTATTATTATTGAATCTGT
AACAAATTGCACTTACAGTAGCCAAAATAGATCGTCACAAGAAATGAATG
ATAAATACATTTTAATTTAAAGTCTATATCGTGGTCAATTTAAGTGTCTC
AAATCAAATAAAACTTGTTAACTATTACTAACATTCTGGGGCATCTTAAT
TCATTCTACAAATTTGAATATAAAGCCTATCATTGACTTAAATATGTCTA
TAAGATAATATTGACCAGTATGTATGTGTCAAATAAATAATAGTTTGGAT
TTTTCTCCTTTTCTTGAGTTTTGTTCAAGATTGTTTTTAGTTTAATGTAT
CACATATTATATACTAATAATAAATATAAAGATATTTGGGGCAATATAAA
TATCTTAAATCATATATAGGTTAGTTAAAAATCCTTGGTAAGCTTGAATA
CAAAACCCATAATATATCTATTAGATATTGGGTTAAATGTATACGTACAT
ACATAGATTTGTAATAGAAAATTAATTTAGAATTTCGCCTTTATTTGTTT
TTTCTTCAAAATTGTTTTTATGTTGATGTACAATATGCTGAAATTTTTTG
CTTCAAATAATTAATATTTGTTTACTTAAATAAAAAATTTGATATTACTA
TTAAAAAAAGATTTAATTTATTTTTATTTCAGCACATATTATATTTTTTG
GTCTAAATTCCTCTTGATCGAATTCATTCCCTACATTATACTTATTGTGT
TGAACACATCGATTATGAAGACTACACATCGAGCAATGGTGGATCGTCAA
AGACTTGGAGTCCAAATAAATCAATCCCAACAACTCTCAAAAGATGAAGC
CCAGATGTCAAAAATTCTTCTTACCATCGTTGTTGTATTTGTCTCTTGTC
AAAGCTTGAAAATAATCCCGGATTTGTATGAAGTTCTTACATGCTTAACC
AAAAGGGTAAATAAGTTATAAATAATTAATTTAATATTGGTTTTGAGACT
TAGTCCAAGACTAGTTTTAACAATTTTTTCATGAGCGATTTGAAGAGATA
TTTCGGTCCATTGCGCCTCTCAGACTCTAAACAAAAATTTAATCGTTTTC
AAATCTTGGTATTTATTTTTTTTGTCTTAATCTTTGGACTAATTTCCTCA
CTTATTCGGATTTATGATTTATGCAAATATAGTTTATTCATATTGAATAT
TTTCAAGAAGAGCAGCTTAGCTCCCATAACGTTTCATTATATCAGCTACA
ATCAGCAGCGGTGACAAGAGAGGGGGAGAAGGAAATAAACAAGAACATTC
TCAATAATTACTCCAATTTTGACCCCAACCACAATTCTACTCTGACTCCA
ACAACTACTTTAAATCATAACTTTGCAACAACTCTTACGTCTTTTATGAG
CACAAACGAATTTTTAAGCAGCTTTTGAATATAGTTTAATATTAAWAACA
ACGACTAAGGAAATGAAAATTAATTRTTCAYATTACCAACTACCAAAAAA
AAAAAAAAAAACCCTCACAAGGACTTCACGTATTATGTAACACAATTAAT
TTTATAAATTAATACGTGAATCGTAGAATCGAAATTGACCTAATTTTAAA
TGGGACAGACATATATTTTGTATGATTGATGCTGACCGAATTTTTCATTT
GGAACACTGATCTAGGTAAAAAAATTCTTTATACAGGTGTAGACTTAACT
ACTTTAAATGACTGAATTAGTTTGATCTACTCAAAGTCATAACGGTATCA
GACAGGTCTAGGACTATCCGATCGAAACCAAAAACTAGTGATTATAAAAC
TTTTTGCAGTGTGAACCACCTAGAAAATATCAATTACTATTTTAAAAAAC
TTTTAATATTTTACAGAATGTTATGTGGGATGACCTGCTTGTATAAAATA
CATGTTTTTTTATTTCTTTGACATAATTATTTAGATGTTTGTCAAAACTT
TAAAGGTGTACATAACATTATTGAGGATGATCTTTTAATAAAATTATTTT
GTTGAATGACTATCTTTCTATTAGATACATATTTTTAGATAATTAAAAAG
AAGATGCTTCTTATTTCTTTGACATTATTAATTTAATTTATGTTATTATT
TAAAAATGTATTTCTAAAGTTGACAAAGAAAATCTTTTATTAAATATTAA
AAATTATGATTACAAAAATGTTGTAAGGGCTGTAATGTTGTAAATCATCC
ACGTACGACAAGTTTGAGAACCATTGAACTAGAATAGCATAGTTTATGAA
TCTCAATATACATTTCTATTTATGTAATACTCTTAAACTTAAAAACTAAT
ACGAATGTTTTTTTTAGTTATAATCTAAAAGCGACAGTACCCAGTATTGC
TCGCAGTTATTAGGTATCTATGAGCAGAGATATTTTTTCATATGAATTTC
GAACATATCTGAGAGTAACTCCTTGATTTTCATGGACATGTTCTTTTCGA
AAGAATGAATAAATAACGATACAGCTTGAGAAAATTAAATAAAAACATTT
TCTTGTTGCATACAACAACAAAACTTCCATTCTAAAAAATGATTCAAAAC
CATAAATATATTTACTCTCCCTTTATTTTATTTTTAACATGAGGCGCTCA
GCTTTAGCTACACAAGGTTGTTGCTACATTTCATCCATATCATATTAGAA
ATGTGTAAGTGAAGGCTAAATGCAAGCCCGCTTCCAATGGAATAAAAGAA
CTGAGAAATTACTACACTGAAATAACATAAGTTCAAAAGACCATTTCTGA
TATTTTTATGGTAAAAAAATATACATTTGATTTAAATACTTAAACATATA
TCTCCATAATAAATCAGGCCTATGAAATTCATACATCACAGTTTCAATGA
AATTATTAAATTCAAGTATCAAACCTATTACAAGCCTTTTTTTTTAGGTT
AAGGTATATACTGTGCGTCAGCAAATTGAGGAAAGATCTTTAAAGTCAAT
TTTCGATTTAAAAAAAAGTAAATTCCGAGGTTTTGTAGAACAAAGGTTGT
AAAGGCCTGAATTTTAGTTTTCAAGTGATACTTGTTTTGAGCAGCTCAGA
TAACAGCAAGTGTTTGATATGGACGCACAATACAAAGAGTTGCTGACATG
CTCCACACCGGAATATCAGTGACCTACATTTGTGTGATTGTACCTTGCAA
AAAGACACTGGTTTATGAGGTGAGGAATAAGATCAAGGAAGGAGAAAGTC
TGGAGCAGTAGCCGGGAAGTGGGGGGCAGAACAAATTGAAGAATGTCGAG
TTTTTGGAGCAATTGGAAGACACCATCCTGGGACAATCCAACATTGGAAT
GACCTCATATGTCAGAAGGAAGCGTCAACGACTTACTGAATTGGTCAAAA
TCAGCAGACTGAATACAGGAAAACGGGTCGTTAATTAGCCTTCTATCTTT
TGGCCCCTATGATCCCCTGACTGTGCTCCTCTAAATTACGGAATCTGGGC
TTTACGAAAAAAAGTAGAGCCTGTACCAACCCTTACTCGTCTGTCAACGC
CCTTAAGGCTGCTATTTATGAGCAATTGACTATCATGCATGAAAAATGTG
TTGTGAGAGTCGGCAGTGCCTCCAGGAGAAAAATGGACACAATGGTTGTT
GCAAAATTGTGGACATATTGAGAAATGAAAGTTGAATATGTGAATAATTA
ATTGTATAAATAAATATTTTTTCTATCACCATCCTTGCACTCTCCACGAG
GCATTTGACTTCCTGCGATTTGCAGACGTACACCGTATATTGGACTATTT
GAATCTAATAAATGAGTCAGTTTTTCATAAAAATATGACAAATGTTGGTA
TGAAAATATGTTATGTCATTGTAGTAATTTCTCAGTTAAGCTACACCTAC
ATGTTTCTAGTATTATATGCCTCATCTAAAGTAACATTTATTATTTTTTA
TGTGTAATTTCTTTCCCTTTTCTTTTGTAATGAAAAGCACTCAGTACATA
CGCTTGTTGTTAAAAATTAGTCCTTCTCAGACAAACTTTGTTTTATTAAT
ATAGATTTCAAACTTTAAACTCAAATCCGATTATTAAAAATAATAAACTA
AAATATAGAATGAATTAAGGTCTTAATCTTTTTTATATTAACTTTTTCAG
GGTCAATGCCCATCAACACCGTTTATTGATGGCATCATTCATCTTTCTCA
TTTCTTTTTGGCGGTGAATTCATCAATCAACTTTATCATATATATATTTC
GAGGATCAAAGTTCAGAAAGGTTTTTGCTCAAAAGTTTTATAGAAATAAA
AACTCTAGTAGTTTTGAAGTACGCCCCAGTACAGTCCGAACAAACATTTT
CGATGAAAGAGTTTCCAATAATCCTCACTCAAATCCATCATCTCTTCATG
CACTCTCCACGCAAACCTTTAGTTCTAGCAAGAATGTGGCAAAAACTCCA
AATAACACCACCACCTCTGTTTACAAGAATAGAAGTCGAAATGGCAAGGC
ATACTTTACTGAAGTAATGAGACAAACCTATGTTTAA

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