EMLSAT00000001538, EMLSAT00000001538-697385 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001538
Unique NameEMLSAT00000001538-697385
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1268supercontigLSalAtl2s1268:46825..51289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001538 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001538EMLSAG00000001538-684304Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006727EMLSAE00000006727-715655Lepeophtheirus salmonisexon
EMLSAE00000006728EMLSAE00000006728-715656Lepeophtheirus salmonisexon
EMLSAE00000006729EMLSAE00000006729-715657Lepeophtheirus salmonisexon
EMLSAE00000006730EMLSAE00000006730-715658Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770551auto770551Lepeophtheirus salmonispolypeptide
EMLSAP00000001538EMLSAP00000001538Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001538

>EMLSAP00000001538 ID=EMLSAP00000001538|Name=EMLSAP00000001538|organism=Lepeophtheirus salmonis|type=polypeptide|length=271bp
LKDVRVFSKSDFDVNTWINDSLSQEGGGVDSATDKSASTLVMNVKLLIVK
LNGSLEAESGFRIQSSSAEYEDICGIENKKLSSRIIGGQEAEPNQFPWVV
AIEIKKYMESELCTGSIVNKQYILTAAHCVHTFNRFGITAGVHDYTEDEP
HQQIMYSNEHIIHPGFIYDDFGSHSDIALIKLKEELEFNEYVRPICLPKY
SDVGKTFADENVTSTGWGFIRGFPNPIMVPELHYVNGLRVIRNDVCAQTH
GSKINEDSICIDSSDHKGVCF
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mRNA from alignment at LSalAtl2s1268:46825..51289-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001538-697385 ID=EMLSAT00000001538-697385|Name=EMLSAT00000001538|organism=Lepeophtheirus salmonis|type=mRNA|length=4465bp|location=Sequence derived from alignment at LSalAtl2s1268:46825..51289- (Lepeophtheirus salmonis)
TTGAAGGATGTGCGGGTATTTTCTAAAAGCGATTTTGATGTAAACACATG
GATCAATGATTCCTTATCCCAGGAAGGTGGTGGCGTCGACTCCGCTACAG
ACAAATCAGCCTCCACGTTGGTCATGAACGTTAAATTACTTATCGTTAAA
TTGAACGGAAGTCTTGAAGCAGAGTCTGGATTTCGCATTGTAAGTCTTCC
CCGTACTCTTCTTCGAGAGAAAAATGTTTTCAATGAACACGCTGAAAAAA
TTTATATTAAATTTGTAAAGGACTTGGATCCTTAGAAATWTTTTAGGAGT
TTGYTKTTTTCTAGCATTTGGAGCCATATCTGTCCGATGATAACATTGAT
CTCTCTTGATCGTATCAGGTAAAATTACAATAATGAGAGYTWAWTTTTTA
RTTAATMATTAWTYTATAGRAATTTATTTTTCCCTATTATGATTCCATTT
CTCCCAAGATGTACCTCCAGTTATTTTTTTTWTATTATTAATNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTCTAACAAGCATTCCTCAAAATTGGTAACATTTATGCTA
AGTGTTCGAGGCTTATGATGAAATTGTTATCCGTCTAATTTTAGTTCTTT
TGTTTGTGTTGATTTTATGTTATCTATTTTCAATTAATTAAATAAGTGAC
AAAAATAGATAGATTACTTTATGATGACTTATGTCGTCATTGTCTTGGAT
TACCTGAGATTTGAATTATTATAAAATAATCCTGATCAATCAATCGAAGT
TGATTTTGAATTCAATATTTATCATACTTGTAGGTATATTAACATTAAAT
ATATATCCATAGTCAACCTAAGATTATAAATATTATTGGATTTCATGGAT
TTTGTCATATTTTGGAAATAAAAAAAATACTCACCAATTTCCGTCCACTA
ATTTCTGTATTCAATTCACACCACATATAACATAAGACCAAAGTAATTAC
ATTTCAAAATTAGAGAGTGTATGAAGTAAAAATTAAGTCAAGACTATATT
ATGTTGTAATGAATTTGATGAGTCCCTAATTGTCTTTTATGACAGAAAAA
CTTAGCTAACTACCCTCCCCTTACAAAAATCCTACAAAAGATCTGAAAAT
AGTCTACTGCTGATTGCTTTTGAGCCCAAAGCCAAAACTATCATTTGTAT
TAATTTTTTTAAAGTGAGATCAATAATAATGTCGATAATGATTTATAAAA
GATAAAGGAGTGAAAAAAGCTGGGAAAATTACATTAATAGAATATATTTT
ATTAAAGAATATTAGATTGGAATAGATGAGAGCAGGGATTTCTACCTTTT
AGTATATTTGGCCACATTGCCACTTGAAATATTTTAATGGGCCCCAGAGC
CTATTAAATTAAATTACATGAAAAATGGTTTCTTAAAACAAAACTATTAA
TATATATTTAATACTAATTCAGGCTAAAAAAAAAGGCCAATCTAGAAAGC
CTGGTCAGTGGCGTCCGTTGGACCATATTTTTGGGGCTTGGTTAATATGA
TAGTTTTTGAATTAATTTTTCTTCTCCGCTGCAAAATTTTATCGAATGAC
ATTTTTTAGAAAATAAATCCTTAAAAAAATATGTTTTCTCACTAAAAAAA
AGTTTAACCTGGTAGGGAGAGGGATCTCTTTTGAATACAATATTAAATCT
AATATTATTTTAATAGGATGAGTTTACAATATTAATGTTTTGTGATCCAG
TCTGTCCGTGGGGGATATTTCTTGTAGGAACTATAAAACAATCAAGAAGT
TAACCTACCAGAAGAGGTATTTCATAACTTCAATATTACTGATAATTATT
AATGTAAATCGATCCCGGGTGCCTTCAGTTTTAGTCAAGGCATTTAACAA
CCATTAAATTATAGAGTGCATATTGTTGATACACAATAATAATAAAATAT
GAAATACTAATGACGTATAAAGAGAGAAGAGGGAATACTTTCTAATTTTT
TTTTTAGTTAGAAAAATAAAACCGTCTTCTAGAACAGACTTATATGTTCG
AAACGTGATAAAAAAAAGGGAATCCTTAAAATATCATAGAGGCCTCTAAG
GTCAACCCAACAATGAATATATCAGAGTAAGGTAAGAAGAAGGTGCATCC
GTCTACTGTGAGCAAGGCAATCCCAAAGTCTGGAAGAGGTCCCTTAGAGG
AATTGARAAGCCACTCCTGTCTTAACAATGATAGTTTAGAAGTACTTAAG
AGATAAATAGTAATTGTTATTGTTGACTTAAGAATTATTTAGGCTGAATG
TTAGTAAATATCTTAGTTTGCACATTTTTTTAAAGGAGATTATATGGTTC
AGAGCAGAAAAAAAGAAGGGAGAACAGGACAAAGGATTTTCGATCATAAT
ATGTTCAATTGTATATAAAAAAAAATTGTATTCATTTAAACTTCTTAATA
TCCCAGGAAACGCAGGTCCACCTACGCTAGTTTGTGATGAAAATCATATG
TATTTTTTAGCTTGTTCTTTTTCTTGGGGTTACCAAACTCCAAGAAGTAA
TATTTTGGAGCATGAGTTCCCATCACACAAGGACTGAWTCTTGTANCCGC
CGTTAGATGTTCAACTATGAGCTTCTAACTTTATCGTTATATATAATAAA
TCATAATTACACAACATACCAAAATCTTCAAAAGTTCCTCCTCCATTGAT
CTGTCTACATAAGAGATGCAAGTAGTGGTATTGAAGATTTGTCACGAAAT
TATCATTTTCAGTCCTTCTTGGAGTCAGAGTAAAGTCGAAGATCGACTTT
GGAGTAGCTGGTTAGGGTTACCAAGTTGATTGTCGGAGGGATTGTGCTGG
AAGGGTAGAAAATTTAATATTTCAACAAATTTAAATTGGATTTTTTTAAT
TTTCAAAAATATTTATAAATATATATACAATCCTCCAAACTTCTTTGATT
ATATTATTGAATGGTGATGTAATTATTTTTAAAAAAGCTTTTTTGATACT
TGAAAATAAAAATAAAAAAGCGTCTCGCAATAATTTGTTGTACAAAAATT
ATCGGTTTCCCCCTATGTCTATAGTGCTACAAGTTAGTATGTCTTATTGA
ATGGKGAATCCAGATATTATCTTTCTTCTTTACTATACCAATTTTAAATA
AACATACAGCGTTATCATTCGAACTTAATTTAAAGTCAATAATGGAGAGC
AAATTATTTTTGCAGATTAAATCTTATTTATCTACAGTGATTGAAATTGG
CATGTTAACAGCATGTAAATTAAAACATTATCAGTTTTCAGTGTCCCATA
CCTCCAAAAAGATAAGAAGAAATGAAGTATATAAAAAGCTTCTATACTCT
ACCAACATTAGACTCGTATTCCATCAAGATAATGAAGTTATTCTGTGCCT
TTTTTTTATCTATTGCATTCTTGGTAAGTGATTTATATGTAAATAAATAT
CCTGAGCTATCACGCAATATATTCCCTTTCAGCAATCATCTTCAGCTGAA
TATGAAGGTAAAAGCTAACAGAAACTTTTATGTATTTTTAATACTTTCTG
CTACGTATGTGTTATAGATATTTGTGGAATTGAAAATAAGAAACTCTCCT
CGAGAATCATTGGTGGACAAGAAGCTGAACCCAATCAATTTCCATGGGTC
GTTGCTATCGAAATTAAAAAATATATGGAGTCTGAACTCTGTACAGGATC
CATTGTGAATAAGCAATATATTCTAACTGCAGCCCATTGTGTGCATACAT
TTAATAGATTCGGTATCACTGCTGGAGTTCATGATTACACCGAGGATGAG
CCTCATCAGCAAATAATGTATTCTAATGAGCATATTATTCACCCAGGTTT
TATCTATGATGATTTCGGATCTCATAGTGACATTGCTTTAATCAAACTGA
AGGAAGAGTTAGAGTTTAATGGTAATTTTCTTAATTAATTTCATGGGAAA
AATAATGACATTAATTTCAGAATATGTTCGACCCATTTGCTTGCCAAAGT
ACTCCGATGTGGGAAAAACTTTTGCTGATGAAAATGTCACGTCCACAGGC
TGGGGRTTTATCAGAGGATTCCCAAATCCTATTATGGTACCCGAATTACA
CTATGTCAATGGATTGAGGGTGATCAGAAATGATGTTTGTGCTCAAACAC
ATGGTTCAAAGATCAATGAAGATTCTATTTGCATCGATTCTTCTGATCAT
AAGGGTGTTTGTTTT
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