EMLSAT00000001553, EMLSAT00000001553-697400 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001553
Unique NameEMLSAT00000001553-697400
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s126supercontigLSalAtl2s126:27763..28306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001553 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001553EMLSAG00000001553-684319Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006782EMLSAE00000006782-715710Lepeophtheirus salmonisexon
EMLSAE00000006783EMLSAE00000006783-715711Lepeophtheirus salmonisexon
EMLSAE00000006784EMLSAE00000006784-715712Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769785auto769785Lepeophtheirus salmonispolypeptide
EMLSAP00000001553EMLSAP00000001553Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001553

>EMLSAP00000001553 ID=EMLSAP00000001553|Name=EMLSAP00000001553|organism=Lepeophtheirus salmonis|type=polypeptide|length=127bp
MIEFKIFKKVNAKACLLFKEVLKYFHPFHYVVFIYCHQMLQLTIIQIQIL
HEKILLACKKYVYACDILMPQYLINLMVVLISKNELKSLPSLLLETKTAM
DVIFPKSHSMFDTFNDVCLMYEMANDK
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mRNA from alignment at LSalAtl2s126:27763..28306+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001553-697400 ID=EMLSAT00000001553-697400|Name=EMLSAT00000001553|organism=Lepeophtheirus salmonis|type=mRNA|length=544bp|location=Sequence derived from alignment at LSalAtl2s126:27763..28306+ (Lepeophtheirus salmonis)
ATGATAGAATTTAAAATATTTAAAAGTATTTAATTTTATCCTATGAGGTT
GATTTGTTTAAATATTATCAAATAAAATAAATTTGGATTTTGGAAGAAGT
CAATGCGAAAGCTTGCCTGTTATTTAAAGAAGTGTTGAAGTATTTTCATC
CCTTTCATTATGTAGTTTTCATATATTGCCATCAAATGCTACGTTATTAC
AACAGTTTTTCCTTTTATATTTTGTAGAGACCCGAAATTGATGCTATTAG
ATTTGATATCCTGTATAAATTTTTATATTAGAACTTACTATAATACAAAT
ACAAATTTTGCATGAAAAAATTCTTTTGGCTTGTAAGAAGTACGTCTACG
CCTGTGATATATTAATGCCTCAATATTTGATAAATCTTATGGTTGTACTT
ATTTCTAAGAATGAATTAAAATCGTTACCTAGCTTATTGTTAGAAACTAA
GACAGCAATGGATGTTATATTCCCAAAGAGCCATTCCATGTTTGATACAT
TTAATGATGTATGTCTCATGTATGAAATGGCTAATGATAAATAA
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