EMLSAT00000001631, EMLSAT00000001631-697478 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001631
Unique NameEMLSAT00000001631-697478
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1135088..1138820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001631 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001631EMLSAG00000001631-684397Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007136EMLSAE00000007136-716064Lepeophtheirus salmonisexon
EMLSAE00000007137EMLSAE00000007137-716065Lepeophtheirus salmonisexon
EMLSAE00000007138EMLSAE00000007138-716066Lepeophtheirus salmonisexon
EMLSAE00000007139EMLSAE00000007139-716067Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780460auto780460Lepeophtheirus salmonispolypeptide
EMLSAP00000001631EMLSAP00000001631Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001631

>EMLSAP00000001631 ID=EMLSAP00000001631|Name=EMLSAP00000001631|organism=Lepeophtheirus salmonis|type=polypeptide|length=1040bp
LDLKSSSVEIVGALVSIKSRVSIVPPNKKLLELLIKSNIVSQLVSLLSRP
NSKIVDLSLSILATLLLQETPRNQIRSCKGIRIVLGIIGTXGEESXLSXA
CRALANMGMNPKNVDVMFDEGVLPLLLKTLSDVSCPRTKQVIVRAIRILG
SSRSKYKQKIVQGQGIVSVSALLDTKDKELLRAVTRCLAHFTHGGDLSTA
TQVQSDSGRGFRRLAELVRSKDPKISESALSCLINLSHVESVRPNLGNAG
TISVLVDRIPESKNTTVFYQGVIALCLFCRESVNRRKLRDSGGLAFFVEV
LRMDDKCNLHNRILQSLLQFNYDTLSLNILQDKGLIPTLLKLLNKDEAVT
SFKHSCEAEISKSEIEKFDSDPLSLSIHETIEMETSGTEIPKNKTEIENE
SEEDGNEQELDVNASRIYNNLVSNTNMGGEEPTKFSNKRSHITFRVDSPS
YQEVQKEFQRFLKVRDNVIDLEDSIPGSLCQSPDRSPWSTPSSRGGYSPE
SSCSGYSPLHDPMEVSYSTPKYSSYGPISDTEDEDSNPATMPIVVSSPEQ
PTKVYSPIETFSETEEENDEDGISEDPVPSTSSASPPPPKKRRTSFSSSL
ALNIPKVQSIFDLPTSPIKFSTTPEDSSFSFPNKEDKYSSQNQFIFQILS
RLSQAEKPHDNIVSLETTTTLLRHLFTMPEDPGESRVARILLRLSRNLYA
FMSFVYQRQLPYLRRAFDSFCTLEDSPCIRCNKIKGFLNSFSTNVSLLAE
TGYAEGEMCHHLLRGSVHEKRSIAISTPFVARPRKLLRNILINHEGLEII
FDVLETCSDSLSNDFFSHSVMSLNVLXSHLGVINPNLTMAKMRRNLKNIC
KFKPGVGVIFVLDDGSEVHADRSVLTSSSQVFEAMLVGAFVESGKEKIKL
PLTSKHALECLIHRLYGCDWKCPQFKESMRVEVLLELLMVSDKYLMEDFS
IEVSREIIRRCYHGGNDIIDIYKGSLVVDYPVRGLGIDSLSKSTIQYILV
GTMSNIKRVEIFSTILFSELKNDFIDDVSKMITSKLNEVR
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mRNA from alignment at LSalAtl2s128:1135088..1138820+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001631-697478 ID=EMLSAT00000001631-697478|Name=EMLSAT00000001631|organism=Lepeophtheirus salmonis|type=mRNA|length=3733bp|location=Sequence derived from alignment at LSalAtl2s128:1135088..1138820+ (Lepeophtheirus salmonis)
TTGGATCTTAAATCTTCCTCCGTTGAAATTGTGGGGGCATTAGTCTCGAT AAAGAGCCGGGTGAGCATCGTACCACCCAACAAAAAACTCTTGGAGCTCC TTATTAAGTCCAATATCGTATCTCAGTTAGTGTCACTCCTATCTAGACCC AATTCAAAGATTGTAGACCTTTCTTTAAGTATTTTAGCTACTCTTTTGCT CCAGGAAACGCCTCGAAATCAGGTATTAAACATTTATTATGTCAAACAAA GTCTACGATGAATTTGACTATTGTTTTATTTGTCATAATTATGTTTATAT TTTATTTCATAGATTCGTAGTTGTAAGGGAATACGCATCGTCCTTGGTAT TATTGGAACGWTTGGAGAAGAAAGTWTTTTATCTSGAGCCTGTAGAGCTT TGGCCAATATGGGCATGAATCCTAAAAATGTCGACGTTATGTTCGATGAA GGGGTTTTACCTCTTCTACTGAAGACTTTATCAGATGTAAGCTGCCCTCG AACCAAACAAGTTATAGTAAGAGCTATAAGGATACTTGGATCATCAAGAA GTAAATATAAGCAGAAAATCGTTCAGGGACAGGGTATTGTATCCGTAAGT GCACTGCTTGACACTAAAGACAAAGAACTTTTAAGAGCTGTAACGCGATG CTTGGCTCATTTCACTCATGGTGGAGATCTCTCTACTGCCACACAGGTTC AAAGCGATTCTGGAAGAGGGTTTCGACGATTAGCGGAATTAGTTAGAAGC AAGGATCCAAAAATTTCTGAGTCAGCTTTATCTTGTTTGATTAATTTATC TCATGTTGAGAGTGTAAGACCCAATTTAGGAAATGCTGGAACTATCTCTG TTTTAGTAGATCGCATTCCAGAGTCTAAAAATACTACAGTATTCTACCAA GGAGTTATAGCTTTGTGTTTATTTTGTCGTGAATCTGTGAACAGAAGGAA ATTACGGGACAGTGGTGGTTTGGCCTTTTTCGTTGAAGTTTTGAGAATGG ATGATAAATGTAATTTACATAATAGAATTCTGCAGTCCTTACTTCAATTT AACTATGATACCCTTAGCTTAAATATTCTCCAAGATAAGGGGTTGATCCC CACATTGTTAAAACTTCTAAACAAGGATGAAGCTGTAACATCTTTTAAAC ATTCGTGCGAGGCAGAGATAAGTAAGTCTGAGATTGAAAAATTTGATTCA GACCCTTTGTCGCTATCCATTCATGAAACAATAGAAATGGAAACTTCAGG GACTGAGATCCCTAAAAATAAAACGGAAATAGAAAATGAATCTGAAGAAG ATGGAAATGAACAAGAGTTAGATGTTAATGCTTCAAGAATTTATAATAAT CTAGTTTCAAATACTAATATGGGTGGTGAAGAACCCACAAAATTTTCAAA TAAACGATCCCATATTACCTTTAGAGTTGATAGTCCTTCCTATCAGGAAG TTCAAAAAGAATTTCAACGTTTTTTAAAAGTGAGGGACAATGTTATTGAT TTAGAAGATTCCATTCCTGGAAGTCTTTGTCAATCCCCAGATCGGTAAGA GTATTTTAAATAGTTTTTCGTATTCAGTGCTAAGTATGCATGTGTCATTA TTTTTTAAAGTTCTCCATGGTCAACCCCTTCCTCGCGCGGTGGTTATTCT CCAGAAAGTTCATGCTCTGGATATTCCCCTTTGCATGATCCCATGGAAGT CTCTTATTCCACTCCAAAATATTCATCTTATGGTCCTATTTCAGATACTG AAGATGAAGATTCAAATCCAGCTACTATGCCCATTGTGGTTTCTTCTCCT GAACAACCCACCAAAGTGTATTCTCCAATAGAAACATTTTCGGAAACTGA AGAGGAAAATGATGAAGATGGTATATCTGAGGATCCTGTTCCCTCGACCT CTTCAGCTAGTCCACCACCTCCGAAGAAAAGGAGAACATCCTTTTCATCT TCTCTAGCTTTGAACATACCTAAAGTTCAAAGTATATTTGACTTACCAAC CTCACCCATAAAATTTTCTACCACGCCTGAGGATTCCTCATTTTCTTTTC CAAACAAGGAGGATAAGTATAGTTCTCAGAATCAATTTATCTTTCAAATT TTATCACGCTTGAGTCAAGCAGAAAAACCTCATGATAATATTGTTTCCTT GGAAACAACGACAACATTACTCCGACATCTTTTCACAATGCCTGAAGATC CAGGTGAATCTCGTGTTGCCAGAATATTGCTGAGGCTTTCTAGGTAATAA GTTTGTTTCTCAAGGTACTTAAGTACCTAGATTAGTTTTCATATACTAAC ACTTACCTATTTATGTTTGCAGAAATTTATATGCTTTTATGTCTTTCGTT TACCAACGGCAGCTACCTTATCTTAGAAGGGCCTTTGATTCTTTTTGTAC TCTGGAAGACTCTCCCTGCATCCGTTGCAACAAAATTAAAGGATTTTTAA ATTCTTTTTCTACCAACGTATCCCTCCTAGCTGAAACGGGTTATGCAGAA GGTGAAATGTGCCATCATCTATTGAGAGGAAGTGTGCATGAAAAGAGATC AATTGCCATATCGACACCTTTTGTTGCTCGACCTCGTAAATTACTTAGAA ACATCCTTATTAATCATGAAGGACTCGAAATCATATTTGACGTATTAGAA ACATGTAGTGACTCCTTATCAAATGATTTTTTTTCCCATTCCGTTATGAG CCTCAACGTTTTAGKAAGCCACTTGGGCGTCATCAATCCAAACTTGACCA TGGCAAAAATGCGACGAAATCTAAAGAATATTTGTAAGTTTAAACCAGGT GTTGGTGTTATTTTTGTTCTTGATGATGGATCGGAAGTTCACGCCGATCG CTCTGTTTTAACATCAAGTAGTCAAGTATTTGAGGCGATGCTTGTTGGTG CTTTTGTTGAAAGTGGGAAAGAGAAAATAAAACTTCCCCTTACTTCCAAG CACGCATTGGAATGCTTGATTCATCGATTGTATGGCTGTGATTGGAAATG TCCACAGTTTAAGGAAAGCATGAGAGTGGAGGTTCTCCTTGAGCTACTCA TGGTGAGTGATAAGTATTTAATGGAAGATTTTAGCATCGAGGTTTCAAGA GAAATTATTCGGCGTTGCTATCATGGAGGCAATGATATCATTGATATTTA CAAGGGTAGTCTAGTCGTAGACTATCCTGTTCGAGGGCTAGGGATTGACT CCCTCTCAAAGTCAACCATTCAGTACATTTTAGTTGGAACCATGTCGAAT ATTAAAAGAGTCGAAATATTTTCTACCATTTTATTCTCCGAACTAAAAAA TGACTTTATTGACGATGTGAGCAAAATGATTACGTCTAAATTGAATGAAG TTAGATAACCTGTGTATATAGAGAATACACGTCAAATTATTTAATGAAGT TTTTCTTAGGAAATGATAATTAATAATCGCATCTGTTATTTTTATAATCC ACTCCAGTGAACCATTTATAAAATGTTTAAACCAACCATGATTCACGATT TCATGTCCCTCTAGTCAGTTCACCGTTATTCCATAAATAACCTAATCTAA TGATTATAATGTTTTTCCATAAATTCTTAAATTTTTTTTATCAATAATTA GAATTCCTGGACTTTATCCATTTAAACACATTATAATACTATGTTTTTCT TCCTAATTTTATTACTACGTATGAATTAATTGAAATAAAAGAAATATAAA GGGAGTTATGAAAACCATTCAATGTCCTACAGA
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