EMLSAT00000001634, EMLSAT00000001634-697481 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001634
Unique NameEMLSAT00000001634-697481
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1218689..1222954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001634 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001634EMLSAG00000001634-684400Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007148EMLSAE00000007148-716076Lepeophtheirus salmonisexon
EMLSAE00000007149EMLSAE00000007149-716077Lepeophtheirus salmonisexon
EMLSAE00000007150EMLSAE00000007150-716078Lepeophtheirus salmonisexon
EMLSAE00000007151EMLSAE00000007151-716079Lepeophtheirus salmonisexon
EMLSAE00000007152EMLSAE00000007152-716080Lepeophtheirus salmonisexon
EMLSAE00000007153EMLSAE00000007153-716081Lepeophtheirus salmonisexon
EMLSAE00000007154EMLSAE00000007154-716082Lepeophtheirus salmonisexon
EMLSAE00000007155EMLSAE00000007155-716083Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780535auto780535Lepeophtheirus salmonispolypeptide
EMLSAP00000001634EMLSAP00000001634Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001634

>EMLSAP00000001634 ID=EMLSAP00000001634|Name=EMLSAP00000001634|organism=Lepeophtheirus salmonis|type=polypeptide|length=489bp
MAKFTKDNVKSCMKSSALTLATLLGVIGGVVFGLLLRQREEKWTEREVIY
VSYVGKLFLRMLKALIXPLIVPSLIAAVGSLDMSLSGKVGGRAVGYYMST
TVLAVILGIILVTSIHPGTPKEAENDIKKVGESRNVTAADTLMDLARNMV
PPNLIQATXMQYRTVLTYPGVEKYNDGKQVRDPNDLYTWKISGEFTNGTN
ILGLVFFAVILGITLAQMEEKGKPLLDFFKCLSEAMMCITTWVIYMAPXG
VFFLIGGQILEMEXLSLVAGQLGLYFMTVLVGLFFHGFVVLPIIFTIFTR
ILPFKFIANMTNAFTTAFGTASSSATLPVTINLLEEKNGVDPRIARFVLP
IGATINMDGTALYEAVAALFISQIRGMSMSIGXIIAXSIXAXXASIGAAG
IPQAGLXTMVMVLDTVGLPAEDVTIILAVDWLLDRFRTAINVLGDSIGAG
LVYHLSKDELDAMSKQQNQPEGGFEALPMTEIEDDTDRK
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mRNA from alignment at LSalAtl2s128:1218689..1222954-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001634-697481 ID=EMLSAT00000001634-697481|Name=EMLSAT00000001634|organism=Lepeophtheirus salmonis|type=mRNA|length=4266bp|location=Sequence derived from alignment at LSalAtl2s128:1218689..1222954- (Lepeophtheirus salmonis)
AACGAAATGGCGAAATTCACCAAAGATAACGTAAAGAGCTGCATGAAAAG CAGTGCTTTGACTCTAGCGACTCTTTTGGGTGTGATTGGTGGAGTTGTCT TTGGGCTATTACTCAGACAAAGAGAAGGTAAGATGGAATTTACGTCTAAT AATACAGGACATTATTTGGAATCGCTAGTTATTTCTTATTTATTCCCAGA AATATGAATGTACACAAAATGTTCTTAAATTGGATAATAGGTCCTCAGTC TTGTCGTCTAACTAAATCATATAAATATAGAGTAATCTATTAAAACATGA TTTTTCTTAATAAATGCCTCTCTTTTTTAATAGAAACGGCATTTCCTTTT AACAATATTTCTTTGCATTAAATTATTATTTCCCCCAGAAAAAAGTCGTC AATTAAGTCATTATAATTATTTGATTTGTTCGGATCGATATATATATTAT TTATAACAAAATCAAGAAGTATTTCTCTTTTTTTATGGGTAGTATGTAGT TCTCAATGAAAAATTTCTTAGTAGAGATATAAGTGAGAATCTATCATTTA TTAAAAATAATATCTTCTCTCTTTTTCTATGCCTCAAAACTTAATTAAAG TAATTTCAAAGATGAGAAAAGAATAGAGAGTACTTATCTTTTTATTTTGC TTCTTCATTTGAAAGAATATTTCGTATCTATGTGTCTCTCTCTCTCTCTA TAAGAATATAAAAGATAAATTAAGTTTTACGCTAATTTGAAACTATGTAC ATAGGTAATTATCCTTTTTTAAAACTAACACAAAGTAATCGCTCTCCCTA TTTATATATACATATAAATATTCCTCTCTTAATGGTATAATGACCTTTTT TTTCCCCCTGGTAAAAGATGCGTTTATATACATATATACTTTAGTTTGAA ATGCTTATATATTTTTCATCTTTTTATACATCTCTGAAGAGAAATGGACG GAAAGAGAAGTGATTTATGTTTCCTATGTTGGAAAACTTTTTCTAAGGAT GCTGAAGGCTCTCATCTTKCCTCTCATTGTTCCCAGTCTCATTGCTGCCG TAGGGTCCCTCGATATGAGCCTCTCAGGAAAGGTATGCTAAGGGTACTAA ATGTACGGATATATTGGTAATTTATAAACCATTCTATAGGTTGGAGGCAG AGCTGTTGGTTACTATATGAGTACAACAGTTCTCGCAGTCATTTTGGGTA TTATTTTAGTCACGTCCATACATCCAGGAACTCCAAAGGAGGCAGAAAAT GATATTAAAAAAGTAAGACTCTCCAATCAACTACATTATATCAATAAACC TCCGTTTTGCTTGTTAGTTTTGTATGTATCTATATAAAAATATGTTTTTC TTCATCTTTCAGGTCGGAGAATCCCGGAACGTGACTGCAGCTGATACTCT TATGGACTTGGCGCGAAACATGGTACCACCGAATTTGATACAGGTAAGAT TTTTCATATTTAATCACCAAATTCACAACTTATGAGCTATATTCTCAAAT AGGCGACCAMAATGCAGTATCGGACTGTTTTGACGTATCCTGGGGTTGAA AAATATAATGACGGGAAACAGGTTCGTGATCCTAATGACTTATACACATG GAAAATCTCTGGAGAGTTCACTAATGGAACAAATATTTTGGGGCTGGTAT TTTTTGCAGGTGAACATTTTTCCTGTTTTTTTTTTTTATTTGTTTGTTTT GCTCAATGGAATGTATTTATTCAATCATTCCCTATAGTTATTTTGGGTAT TACATTGGCACAAATGGAGGAAAAAGGGAAGCCGCTGCTGGACTTTTTCA AGTGTTTATCTGAGGCAATGATGTGCATTACAACGTGGGTAATTTATATG GCTCCTKTCGGMGTCTTTTTCTTGATTGGAGGACAAATTTTGGAAATGGA GGYTTTATCGTTGGTTGCGGGTCAATTAGGTCTCTATTTCATGACGGTTC TTGTGGGTCTATTTTTCCATGGATTCGTGGTTCTACCTATTATTTTCACT ATTTTTACAAGGATATTGCCATTCAAATTCATTGCAAATATGACTAATGC TTTCACAACGGCTTTCGGTACTGCAAGTTCCTCAGCTACCCTTCCAGTCA CGATCAATCTTCTTGAAGAGAAGAATGGTGTTGATCCAAGAATTGCTCGG TAAGAAAGAAAGGCTTGTAATTTCATGTCTCATCATACAAATTTATGACA TTTATATATTTTTAAAGATTTGTATTGCCCATCGGTGCTACAATCAACAT GGACGGAACAGCTTTATACGAAGCAGTCGCTGCACTCTTTATCTCACAAA TCCGAGGAATGAGCATGAGTATCGGTNAAATCATAGCTWTTTCTATTKCT GCTKCGSCAGCCTCTATTGGAGCTGCGGGMATTCCTCAAGCAGGTCTTMT GACAATGGTAATGGTATTGGATACTGTTGGTCTTCCCGCTGAGGATGTGA CCATCATTTTGGCTGTGGACTGGCTTCTTGACAGGTATGTATTGTCATTT ACGTGGGAGGGAGGGAAAATGTACGATACTATGTACATCATATGCATGCA TGTATTGTTACTTAATTTGAGCAATGTCATTTATCGATGCGTTCAATGTT CATACTCCATTAAATTTCCATCAAATCATAATAACAAACACACACACACA CACACACGGGAACGAAATGTACATACGTACGTAGCCATATGTATTTAAAT TGAAAGGAAGTTCAATATTTTTTATTGTTCTTCTTGGTGTAAAATACTCT ATTTATCATCTCTGTGTAAATTGATAATATGGAACGAGAGGAAATTAAGA GGAGCTACATATAATGATGCCACTAGTCAAATTACTTATTTTATTTTAAG AGATAAGTATGTCAGTCACTCACTCACTTAACTATCTATAGACCCCTCCT CCCCCTCCTTCCCCCTCAATTGCAAAATAATAATAATAAAGGCAACAAAT GCATAGGGTCTATGGCAGGAAAGGACTTGTTACTTATTCAATACAAGATT TTTTATCTTTAAATAGAAAAAATAATACTTACATATTTATTTATAAAAAT AAATAAAAAACCAAAGCAACATTTTCAAACTCAATAATTTAGAGGTGTCA ACGGGGTCATGACCTCATAGAGAATATATATAGTCAGCTGCTGTTTAGGG ATTTATGCTATATCTTTCTCTTGTTTTTNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATC ATAAAGTGGGGAAGAACAACAGTGGAAATTGAGTTATCAACCCCCTCAAG CAATCTGTACTTGTTTAAGGCCTATGGGGGTAATCCTTCAACTCAATGGA TGATTAAAAAATCGTGACTGTCCAACGGTCATAACATAACTCTTAACATA AAATTCGGGAAAAGGTTTCTATTCTTTTTATTCTTATGGCGACCATTGTC ATAGTTAGAGAGAAGGGGTGGGGGGGGGGGTGTAGGCACCCTTGCCTGAT CTCACAAGATTGAACATATTAAGAAAAATGTATATTGTACGAACGTATAG TTTGAAAAGTTGGGCCGCTCTTAGTGCCAATATTAAACTCAGCTTATGCC ATACACATACACTTTTTTATGTATTTATCTTTATAGAAATTTAACTTCCA ATTTTTTTCGTAAATACAATTTAAAATCTATCCTGTAAACACATATTAAC ATTATTATAACAAACAGCAACACATGCTTCACTTTTTGGCATAATACTAG GTGGAAGTAATATAGGGATCAGTGTTCTTTTTACAAAGCTCAAAACAGTA TGGAACCTTTGACATCCATTTCATAATATAATCAATGGTACTTTAGCTGT AATAACTATTTTAATGCGGGAAATTTGTTGAGCCATACAACGTCATCAAT AGTAAAGTTAGCGGAGTTATGATTATGGATAAATAATAGTATTTATCTGC ATAATTAAAAAAAAAAAAAATACATGGGAAACTGTCTGACCGTGGACACC TCTAACCTCAACCTATCTTTTAATTACTGTTTTGTTTGTTTTTGTTACAG ATTCCGAACTGCGATTAATGTATTGGGAGATTCCATTGGAGCTGGGTTGG TTTACCATCTTAGTAAAGATGAATTGGATGCAATGAGCAAGCAGCAAAAT CAGCCTGAGGGTGGATTCGAGGCATTACCCATGACAGAAATTGAGGACGA TACGGATCGAAAATAA
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