EMLSAT00000001643, EMLSAT00000001643-697490 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001643
Unique NameEMLSAT00000001643-697490
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:1474459..1475474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001643 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001643EMLSAG00000001643-684409Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007199EMLSAE00000007199-716127Lepeophtheirus salmonisexon
EMLSAE00000007200EMLSAE00000007200-716128Lepeophtheirus salmonisexon
EMLSAE00000007201EMLSAE00000007201-716129Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780776auto780776Lepeophtheirus salmonispolypeptide
EMLSAP00000001643EMLSAP00000001643Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001643

>EMLSAP00000001643 ID=EMLSAP00000001643|Name=EMLSAP00000001643|organism=Lepeophtheirus salmonis|type=polypeptide|length=196bp
MNALKNPIRKRNHCINSKLLKDICRQHDLYMTPRLNDVIYLHHKGFTHIE
NLEEFVGLKSLWLDHNNIQKIENIGHMTLLKCLFLQNNKIETLSHLDSLS
NLTTLNLSNNYITSLKGIEVLSKLRTLEVSRNKLKSSEDIESILCCTELS
CLDMGYNCLDGEGVLNVLEGAESLRVLKLVGNPFPRKTKEYRSSRS
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mRNA from alignment at LSalAtl2s128:1474459..1475474-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001643-697490 ID=EMLSAT00000001643-697490|Name=EMLSAT00000001643|organism=Lepeophtheirus salmonis|type=mRNA|length=1016bp|location=Sequence derived from alignment at LSalAtl2s128:1474459..1475474- (Lepeophtheirus salmonis)
ATGAACGCCTTGAAGAATCCCATTCGAAAAAGAAACCACTGCATCAACTC
CAAACTCCTCAAGGATATTTGTCGACAACATGACCTCTACATGACCCCAA
GATTGAATGACGTTATTTATTTGCATCATAAGGGATTCACTCATATAGAG
AACCTTGAGGAGTTTGTGGGCCTCAAGAGTCTCTGGCTTGATCATAACAA
CATACAAAAGATTGAAAATATTGGGTGGGTATGAATGCAATTTCATTTAA
TTATCTTTGCATGGGTTGGGATTTTATAAATCTCCTATTAATCAAAACAC
TTATATAGATGAAGGCAAATTAAAAATGTATAAATATTTAGATAATACAG
ATTATACACCATAAATCGAACCAAGGGCGTTATCTTGATTTCGTGTTAAT
GAACACTCAAAACAGCTTGAACCAAGAGTAGCTGTAAATTAAGGATAAAA
CCTAACTAGGTTGCGTGATCTTTAACAGGACAACTCTCTTCCGTTGTTTA
ATTGCTATTATTAAATAATATAAGTTAATTTTTATATATTTTTCAGACAC
ATGACCCTTCTAAAATGCCTCTTTCTTCAAAATAATAAAATAGAAACCCT
TTCACACCTGGACTCATTATCCAACCTTACAACACTCAACCTTAGTAATA
ACTACATCACCTCCCTCAAGGGAATCGAGGTTCTTTCGAAACTTAGGACT
TTAGAAGTCTCACGGAATAAATTAAAGTCCTCAGAAGACATTGAAAGCAT
TCTTTGCTGTACAGAGCTCTCTTGTTTGGATATGGGTTACAATTGTTTGG
ATGGAGAGGGTGTGTTGAATGTTTTGGAAGGAGCAGAGAGTCTTCGTGTC
CTCAAGTTGGTCGGGAATCCCTTTCCAAGAAAGACAAAGGAGTATAGGTA
TGTGTGTAATTAATCTCATTATTGTCCATTCTATATAATTTGACATATCA
CTTAGATATATTGAATTTTTTTCATTTATATTCAAATAATATATAATTAG
AAGTAGTCGTTCTTAA
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