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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s128 | supercontig | LSalAtl2s128:1865108..1870256 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001657 >EMLSAP00000001657 ID=EMLSAP00000001657|Name=EMLSAP00000001657|organism=Lepeophtheirus salmonis|type=polypeptide|length=321bp
MANMSASNPIQEILKDEDCEEINPLSSSVNSGRRATPPNSLPVVPPATTN
IPLNSPSPCSLSANGTPTRGSNRLEYLKNWTISTYKCSRQTIYEKLGKSS
RTIDSEMEGQIESLRDTQRKYGNILRLARALSSHFGNVVQTQSSLGECFN
DLSNRSPELQKEFKQNADTQKKLRKNGEALLSALNFFVSSVNTLCNKTME
DTITTVKHYESARIEYDAYRSDLEFFSSAPKTESNAVKLIEMEGIFNKAR
VDFEKLRSDVQIKLKFLNENRVKVMHKQLTLFHNAITAYFTGNQNALEAT
LKQFSIKAKGPEITSPSWMEK back to topmRNA from alignment at LSalAtl2s128:1865108..1870256+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001657-697504 ID=EMLSAT00000001657-697504|Name=EMLSAT00000001657|organism=Lepeophtheirus salmonis|type=mRNA|length=5149bp|location=Sequence derived from alignment at LSalAtl2s128:1865108..1870256+ (Lepeophtheirus salmonis)
TAAAATATCGAATATATATAAGAAGCTGTTGAAGAACTGTCAATTTTTCC
CTCATCCTCAGCAGAAGCTGTCAATTGTGAATAATAACAATAATAAAAAG
GAGAGGGAGAGAGAGAGAAAGAAGAAGAAAGAAGCTCAGAATTTATGTTC
TAATGTATAAATTATTATGTTTTGGCAGCAGCTCGAATTAATAGAGTGTA
TTTCAATGATTCGGTGAGCTGCTGAAGGGTTTGTTGTCGTCATCACAAGA
TACTTATTTCCATATCTATGACTATATTTATTTTAATTAATATACAGGTC
CATCATCATTGGTAAAGTATCTCTATAATCATTGCTCAAGTTCCGTGTAG
TCGTCTCTTGTATCCTGATATTCTTACCTTTTCATCATTTCGGGCCCCGT
CATGGCGAATATGAGCGCTTCCAATCCTATTCAGGTTCATTTTTTAAACT
ATAATAATAATAATATTGAAATATTAATCCATTGAGCGTTTTTATTTATT
TTTTTATTTATAGGAGATATTGAAGGATGAGGATTGCGAGGAAATCAATC
CCTTGTCCAGCTCAGTGAATTCTGGGCGTCGTGCTACACCTCCAAATTCA
CTACCGGTTGTGCCTCCAGGTATCCCAGTTTTTCCCTCACTCACTCATTC
TTCATTTAATTTCTTTCCACTTGATTTTTTAACATAATAATATAATGTAT
ATTATATTACAAATTATATAGGGGACGAAAAAGGCATAGCAGTGACTTTT
CTTAATAATTCCGACTCTTGCGGTTCATCCACAAGTTGGAGCGGTGGAAT
GTCTATTGGATGTACCACCGTGTTAAAATCGGCCGCTGGAGACATTGCCG
CAGGMGCGTTTTGACCCTCATAATCCATCCTAAATACATGATATGCCAAT
TCCTTTTCTTGATGTTGGTACTAAGATTCTTTGGGTACATCCATCATCAG
ATTTTGGTGTCATAGATCACAGATATKCCTACCTATAGCATATCATAGTG
AATAGTTGATAATTAAATACATATATTACTCATGCATCAACACATAACCA
CTGGTTTAGACACTAAAGGTTTCTTTTTTATTTCTGAATCCCCAACTCTT
ATTATATATTTTATAATCAGAACTAACATTTGTTCTATTTATTAATTACC
TCACTTTGTCTTAATGACACACACGCATTTACTAAATACTAATATATAAT
ACTTAACCTAATAAATCGCACTATTTGCATGATTACTTAAACCTTTTGAA
TTTTCATTGCAAAGTCCATGATATCAGTANTACATATATCATTCTTTTTT
TTCAGCGACGACAAATATACCGCTCAACTCACCGAGTCCCTGCTCATTGA
GTGCCAACGGTACTCCTACCAGAGGTTCCAACCGCTTAGAGTACTTAAAG
AATTGGACCATCTCTACATATAAATGCTCTCGACAAACAATCTATGAGAA
ATTGGGTAAGAGCTCACGAACCATTGATTCCGAAATGGAGGGTCAAATTG
AATCTCTTCGAGACACTCAACGTAAATACGGTAATATACTGAGGCTTGCC
AGAGCATTGTCGAGTCATTTTGGCAATGTTGTTCAAACTCAGGTAAGGGC
TATTCTTCTGAGATTCAATGGTACGGTTTATATGTATAATATACTATTTT
CAGAGCTCCTTGGGCGAATGCTTTAATGACCTATCGAATCGTTCACCTGA
ACTTCAAAAAGAGTTTAAACAGAATGCAGATACCCAGAAAAAACTCCGTA
AAAATGGCGAAGCCTTATTATCGGCATTGAACTTCTTCGTTTCCTCCGTG
AATACACTTTGTAATAAGACTATGGAAGACACAATCACCACAGTGAAGCA
TTACGAATCCGCTAGGATCGAATATGATGCCTACAGATCAGACCTTGAGT
TTTTTTCATCTGCTCCAAAAACGGAATCAAATGCCGTTAAACTGATTGAA
ATGGAGGGTATTTTTAATAAAGCGCGTGTTGACTTTGAGAAATTGAGATC
TGATGTTCAAATCAAACTTAAATTTCTGAATGAGAATAGAGTAAGTTGCA
GGATTTTATTGGTTTATTGTTTTTATTTTGATTTACTATTTCAATTACAT
CTCCCTATTCTACATGCAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNATTAAGAACACCAATTCCCGGGGTTCTAGTGGAGAAGGGGGG
GGGGGGAATTGWAATCTATATACACATTCATGTACACACGWAAATGTAGG
ACTCCAAATGATGAGCGTAAAAAGTTGTCTGGTAATTAGTAATTATCAAG
TTTTGTTTCCATATTTTAGGGATACATATATATATATGCAAATGTTAAAT
ACTAAGATGTTATTGATGTATATATATACTGGGTGTAAATTTAATTATGC
CATACTTTGTAATTATCTCTTAAGCATTCATTACTAGACACTTGATATTT
TTACATATCGTACAAATAATATAAAGCTCATATTTTATACTACAATGTGA
TTTATGAAATCGCTTTGGCCTCAATAACACCGCTTCAACCGGGCTTGAAG
TGACGACTGGTATAACATAGCCTGACATAATACACTTCAATTTGATACAC
GTTTAGTACAGACCATGGCCTCAATATGCGCCCATATGTTGTAATGAGGG
GGGTTGAGGTCAGGATAGGATATTGCWAAAAGTNGCTTCGCCCAATAAAA
AGAATTCAAATACTATTAAATAAATAAATAATATTTTTTGGATGATTTTA
GGAGTATTTACAGAAGTAAGATCCTCTTCTCTCATAAGACATGTTTTATT
CGATGAATGTACATTTGGCTGGAATACGTTTAATTCCGTACAAATTTGGC
ACATTTTGGGATGGGCGCGCAGCATGCCTGAGATTTGATTGCATACTTTG
TTTGACATCTCGACTCTGTGTAAAGATATTTGAAAACATTGTTTTTGAAT
GCTGAAAAAAAAAAGTGCGGAATAGTTATAATTATTGAAGGAACTTTGGA
ATTGCAATTTGCCAAGCCTTTAAAGAAAACATGTAAAAAAGTCTATCATA
ATTAGTTTTATTCCCGGTAATATATTGAATATTATAAATGTATTGTTCAA
ACGACGTACCTGTGTCGTCATTTACAATATTTAAAATGTCATTTTGTCCA
TTCCTCCACTTTCCGATTCAAAGGCGCTCCTAGAATTGTTTTTTGACAGA
GGTTTTTTTTATTTTTATTAATGCCAAATCTGGCAAAAACTTTTTACAGT
AACATTTTTTTAGAAGACACAAAATTTAACCGACTAACCTTGTTTTTTAG
AATAGACGAATTGAATTTTTTTTATAAAAAATAGACAGTCATTTTTTTTA
TTTTTTTTTGTAATAGATTAGAACTATTGTTTAGATTAGTCATTAATTCT
GCCCTTATTTAAATCCTTCTCAAACTTTTTTTAATTTATAGCCTCCCTCA
TTCCAACAAAGATTGTTTCCAATGTTTTCTAAACAGAATCGCGTTTCCGC
TGGAGTTGCTCCTTTATTGCCTCATTTCTTCGTTTAAGAAGCTCAGTTTT
ATTTTAGTAAAGGAATTGTAGTCCTATATTCTTTTTAACAAGTCTTTGTT
AATACTTGGATGAAGAGATTTGAATCTCTCTTTCAATTTATTTTATTGAT
CCTGAAACTAAGATTTTAATATAATCATTAATCAATCTTTTCCTCTCATT
ATTTTCAGGTCAAAGTGATGCATAAACAGTTGACTCTCTTTCACAACGCG
ATCACTGCCTACTTCACGGGAAATCAAAATGCTCTAGAAGCAACTCTTAA
GCAATTCTCTATAAAAGCTAAAGGACCTGAGATCACATCTCCTTCTTGGA
TGGAAAAATAATTAATACGTTGTTTGAAAAAGAAAAGCGCAAGAGATTAT
TATTATTTTTACTTATATTTGTTCTTGTTTTATTTTATTTCTTAACCCTG
ACAAACGCTTTTACTACAAGTGTATCTCTTTTTAAATGAATTCATTATTT
AGACAGAGAACAGTTTTTGATTGAAATAACAATCGAATCACCATCTAGTC
CCACCCATCCCCACAAATGGACGAATATGTTCATCGTTAATTATTATCAT
TATGATGCAATTTTACTTCATTTTATATCAACTGTGGTATTATTAGTCAA
TTTGAATCTTTTTTTTTTCTTCAATGTTTATCTCATTTCTTTATTTTGGG
ATTTTATTTTTATGTACTTAAATATTTATCTGTATATTGCATTTAACATA
GCTTTTGATGGGCAATTTGTTAACACATACATATATATTTTCTTATGTTT
CTTTAACGTGATTATGTCATGTACATAAAGTACATCACATAATTGACGTA
TCATCTTATTTTTTATTTTATTTGTTTACCAAAAGAGTCCTTTGTTGTTT
CCAACACGCCCTTATAATTCCACAGTGTCCATATAGAAGATACTTACAGA
CTGCTGCTTTAGTTTAAAAATTACCTATCTGATGAAATTTCAAAAATTGA
GTTATGCTTAATACTCTGTTCATGTTCAGATTATACTGAAGATTATTTTC
TTCATTCAGGAGCCTGACAAAGTTAGGTTCCAATCCCCGACTAAAATATT
CTTAAATTTCTTTCAAAAGAAATTATCACACATATGAAATTAACAATATT
CTATATTCAAAATTTTGTACTTTCTAAAAAATGTTGTTTGTCAAAATTTT
CCTCAAAATGGTTTTTTGTCTTTTTCTACAATTATCTTGGTAGCGGCCCT
ATTTTCATTACTCTATCTATTTGGAGCTTTTACCAATGTAATAATGTTCA
TTCTTGCAACTTTTTTATTTWATTTTTAATTTTTAACACNNNNNTTATTT
TAATTTTAACACATCTTTCAGAGCAAAACCTTATATTTTAGGACATCTTT
ATTCTAAGGCAGGGATATTCCTTTCAAATGATGATAATAATCTTTTTCCT
CATTCTATACTATTATTAATTATAATTATTATTGTTTTGTTAAAGTTATG
TAACTAGTCACACACTTACTTTATATGAAACGGATTGATATTTATTTGTG
AAAATTTGGAAATGATCCAAAGAATCTCTTATAATAAAACCTATAAAAA back to top
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