EMLSAT00000001659, EMLSAT00000001659-697506 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001659
Unique Name	EMLSAT00000001659-697506
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s128	supercontig	LSalAtl2s128:1907491..1912654 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001659 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001659	EMLSAG00000001659-684425	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000007285	EMLSAE00000007285-716213	Lepeophtheirus salmonis	exon
EMLSAE00000007286	EMLSAE00000007286-716214	Lepeophtheirus salmonis	exon
EMLSAE00000007287	EMLSAE00000007287-716215	Lepeophtheirus salmonis	exon
EMLSAE00000007288	EMLSAE00000007288-716216	Lepeophtheirus salmonis	exon
EMLSAE00000007289	EMLSAE00000007289-716217	Lepeophtheirus salmonis	exon
EMLSAE00000007290	EMLSAE00000007290-716218	Lepeophtheirus salmonis	exon
EMLSAE00000007291	EMLSAE00000007291-716219	Lepeophtheirus salmonis	exon
EMLSAE00000007292	EMLSAE00000007292-716220	Lepeophtheirus salmonis	exon
EMLSAE00000007293	EMLSAE00000007293-716221	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780900	auto780900	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001659	EMLSAP00000001659	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s128:1907491..1912654+

protein sequence of EMLSAP00000001659

>EMLSAP00000001659 ID=EMLSAP00000001659|Name=EMLSAP00000001659|organism=Lepeophtheirus salmonis|type=polypeptide|length=760bp
MEESCLDTPRRLSDLSLDSIVDKFLELAPESVSLHVPAAEILITAFSEAG
KFQDNVISSSIFPPTGLRYLKVPCAANLTVKGLETLRNHPDLIVIRMQGL
VEATVKDLLASLHPKTHQNLRLLDVSQSAFSYPXGKGIVEPLPFDRLKSL
VYLNVSGTEFKKFSLELVASDIPTLKYLDISSTKVSDISPLKAYGDKLQS
LSMYGLKFHADVSENVVDTLIELKGLVHLDISEERDEHPFDIFPNLSGLH
IERLLEDPEALPNIVSLDISGKDEVTMNKLLSFISRRPKLKFLGLLLTQF
GRPHSYNCIEGKDKENSGMVIAGSENEDQILESLRRYANRPQYVQKSLYH
LFRITQETTTSRTDIIELVLQAARKYQRTFSIQMAXTACXFNLCKYGLSL
KLHPRILSEIVRVDLDAMEAFPQHKQLQKNVLLTICCDRILTEVNFDKYR
CARLAMDCLCEWDDXSMNRMSVAICSILAAKITTTQTSELGSQPNYMKKL
LSIVSNRMEERTIDITLKFTLSALWNLTDESPETSKMFLIHDGMPLFVDL
LETFPGEASIETKILGLLNNIAEVHHLRSYLMNDSFLIILRKLLHASNID
VSYFAAGIVAHLASTAPICWFSELRVDEMTDDLWKVVMSWKIPKEEMVAY
RSFRPFLPLMAVDQKHAVQLWAXWAIHHVCIKKAPRYCTMLKRQGGDVAI
LKLLNADKDRPHSAVRKLCESVMEVMYKEGLCPDSPFPASSSSLNEDDDA
SSSVYMELQS

mRNA from alignment at LSalAtl2s128:1907491..1912654+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001659-697506 ID=EMLSAT00000001659-697506|Name=EMLSAT00000001659|organism=Lepeophtheirus salmonis|type=mRNA|length=5164bp|location=Sequence derived from alignment at LSalAtl2s128:1907491..1912654+ (Lepeophtheirus salmonis)
TTCTTCGTGTTTTTAAATGATTTAAACTGACTTTACGTTGAAGTAAAAAG
AAACAACAGTTGTATTTACAGTACAGCCTAGTAGCAAAAGGTAAAAGATA
TTTAATTATATTACTATTTAAAAACGTTTTTTTTTTCCTCACGCTTACAT
CACTCATTCTGACAGACAAAAATAATGACTACCACATGAAGAAAAAATAA
TCAGTGGTTGTTGTGGCTATGAATTCAAANAGCCCACCRGTATATACAYA
TCCAAGACTCATTAGTCCATTACTAGGAGTCAATCCCTTCCAATTTAAAT
GCATGTTTAATCATTATGATTTTCAAGTTTAAAAAAAATAAATATTTAAA
GTATTGCAATAATGATCCTTTTTCTTTTGTTTCTGGTCTACCTGTTTAGC
CTGCAAAAAAGGCTTGTTCCATGAAATGGAATGTATGTAAAATATTAGAA
TAATAAAATAAGGGGATATTTCCACGCAACCTTCCATCTCTTTCTTTCTC
TCTCTCTCTTTCTCTTTTTTTCTTTCTCCTTCTTTTTTGTAAATATTATA
CATGATATCACTTATTTTTTTTAGTGAGACGGGGTCTTTTTGTTGACACG
GAATAATGAAACAATAGGGATGGAGGAATCCTGCTTAGACACACCACGTC
GACTCTCGGACTTGTCCTTGGACTCCATTGTCGACAAATTTCTGGAGTTA
GCCCCAGAGAGCGTTTCTCTTCATGTTCCTGCAGCAGAAATTCTTATAAC
AGCCTTTTCAGAGGCTGGAAAGTTCCAGGATAATGTCATCAGCTCTTCCA
TTTTTCCTCCAACAGGTCTCCGCTACCTGAAAGTCCCTTGTGCAGCTAAT
TTGACCGTAAAGGTGTGTATTGACCCATGGGATTTGATCCACATTTACTT
ATTTGACATTTTTTTATCCCATGATTCCAGGGGTTAGAAACTCTTCGAAA
TCATCCGGATCTCATAGTTATTCGAATGCAAGGACTCGTGGAAGCTACGG
TGAAGGATCTTCTTGCCTCTCTACATCCAAAAACACATCAAAACCTGAGG
TACTATTTCCAGGAAATCAATCCATTGATATATTTGCGTAATTAACACGT
ATCCGTTTCTCCTCTCTTTCTAGACTATTGGATGTTAGTCAATCCGCATT
CTCCTATCCCKCTGGTAAAGGAATCGTCGAACCCCTTCCCTTTGATCGCC
TCAAATCCCTCGTCTATCTCAACGTGTCAGGCACTGAGTTCAAGAAATTC
TCTCTTGAATTAGTTGCGAGTGACATTCCTACCCTCAAATATCTCGACAT
TTCTTCTACCAAAGTATCAGATATAAGTCCATTAAAAGCCTATGGAGACA
AACTTCAGAGTCTATCCATGTACGGTCTTAAATTTCATGCTGATGTCTCT
GAGAATGTCGTAGATACGCTGATTGAGCTCAAAGGTCTTGTTCATTTGGA
TATTTCAGAAGAAAGGGATGAGCATCCCTTTGATATATTTCCTAATTTGA
GTGGACTTCACATAGAAAGGCTTCTCGAGGATCCAGAGGCTCTTCCAAAC
ATTGTGTCTTTAGATATATCTGGTAAGTCAATATCTCACTTTCTCTATAA
ATATTATGCTTATTAAATTATTGAATAACCTTTTAATTTNACATAGTAGT
AGGGGCTARGAAAATATTTGTTTYCTTCTTAAAAATAATTCCCCTTGTCA
ATTTAAGAACAATGTATATTAAATAATTATTTATACAACTTTTATGTACG
TGCATATAGTACGAAAATATGTTTGATATGATTAACAATTCAATGATTAA
TTTTTCATTGTTGTTTACCATTTACATCTATATTTTATTAAAAATATGGA
TGTATTGAAACTATTATTACGTGAAATTTAAATTTATGAATATTAGTTGA
CTGGATAAAATTTGTCGTATATTCCTTGTTGCATAATAATCAATATTTTT
TTGTTTTTATTATGCCAACAATCGTCAAAAAATATAGGGATTTATTTTAT
TAATCCAAGTATTATTTCTTTTTCTTTTTAATCAGGCAAAGATGAGGTTA
CGATGAACAAATTATTGAGTTTTATATCTCGTCGTCCCAAGTTAAAATTT
CTAGGATTATTATTGACTCAATTCGGAAGGCCGCACTCTTATAATTGTAT
AGAAGGAAAGGATAAGGAGAACTCAGGAATGGTGATCGCTGGGAGTGAGA
ATGAGGATCAAATATTAGAATCTCTGCGGCGCTACGCAAACCGACCCCAG
TATGTGCAAAAGTCGCTGTACCATTTATTTCGCATTACGCAGGAAACAAC
TACGTCTCGAACGGATATAATAGAACTTGTTCTTCAGGCAGCTAGAAAGT
ATCAAAGAACATTTTCTATTCAAATGGCGGSTACAGCTTGTTTWTTYAAT
CTCTGTAAATATGGATTGAGTCTTAAGCTACATCCTCGAATATTGAGTGA
GATTGTTCGCGTGGATTTAGATGCAATGGAAGCGTTTCCTCAGCACAAGC
AATTGCAGAAAAATGTGCTTTTAACCATTTGCTGCGATCGTATTCTAACA
GAAGTCAACTTTGATAAATATAGGTGTGCAAGATTAGCCATGGACTGTTT
GTGTGAGTGGGATGATMCCTCTATGAATAGGATGAGTGTAGCCATATGCT
CAATCTTAGGTAAACGCTCAATAATAATATTCTCTCAACAAAATATAATT
ATCATCACTCATCAATATTCTTTTTCTCTTTCTTAATAGCTGCAAAAATA
ACGACTACTCAAACATCTGAGCTTGGATCTCAACCCAATTACATGAAAAA
ATTACTTTCAATTGTCAGCAATCGTATGGAGGAGAGAACCATCGACATCA
CTTTAAAATTCACTCTGTCTGCTCTATGGAATTTAACCGACGAAAGTCCT
GAAACATCCAAGATGTTTTTAATTCATGATGGAATGCCTCTCTTTGTTGA
TTTACTTGAAACATTCCCTGGAGAGGCTTCCATTGAAACAAAGATTCTAG
GTTTATTGAATAATATTGCAGAAGTGCATCATTTAAGAAGTTATCTCATG
AATGATTCATTTTTAATCATACTGAGGTATGTAAATACAATCGGACTTGT
ATTCAAGCTTCTTTGTACATACTTAAACTTATTTTTTTCACAGAAAACTT
CTTCATGCCTCGAATATTGATGTAAGTTATTTTGCTGCTGGCATCGTCGC
ACACTTGGCAAGTACAGCTCCCATATGTTGGTTTAGTGAACTCCGAGTTG
ATGAAATGACGGATGATTTATGGAAAGTCGTCATGAGTTGGAAGATACCT
AAAGAAGAAATGGTCGCCTACAGATCATTTAGACCCTTTCTTCCTCTAAT
GGCTGTGGATCAAAAACATGCTGTACAGCTATGGGCCMTTTGGGCAATTC
ATCATGTCTGCATTAAAAAAGGTATGAATTTTACTCACGAAAAAACCCTT
ATCCTTCGTTTTATTATTTATAGCTCCTCGCTATTGCACCATGTTAAAAC
GGCAGGGAGGAGACGTTGCAATCCTAAAGTTACTCAACGCCGATAAGGAT
AGGCCCCATTCAGCTGTGAGAAAGTTGTGTGAAAGTGTCATGGAGGTCAT
GTACAAGGAAGGTCTTTGCCCCGACTCTCCTTTTCCTGCATCTTCGTCAT
CGTTAAATGAGGATGATGATGCCTCTTCCTCCGTCTATATGGAGTTACAG
TCTTAGTAAAAGTGATTTACATTTATATATATATTAATTATTATTATTAT
CATCAATTATCATATATATCTATGTATGTACTTCATTTTCTTAATTGATT
GTGATCTTTTCTTTTTCCATTGCCGCCTTCCCCTAATTTCTTCGTTCTTC
CCTTCCTATTTTTTCTATTCTCTTTCTTGATATTAACGTTATATTTTTAA
AGTAATCATCATTAATACAAGCTACTTTCCTTTTTCTTCCTCCCCGAATA
TCCACCAACATTCTAAGAAACACTCCATGTGCTTGCAACTTTTAATTTTC
ATCAAATTCTAAATTTACTTATTCAATCCTCATCNTAAGCTACAATAAGA
ATTCGTGTCTTCTAATTCTCCTAATTTCTTTAGGCATTTAATTACAATTA
GTTTTTATTATAATTATTATGGCTCTGATCATTATTTTATGATTATAATA
ATAATTATTATTATTAGGGTTTCATGAAAGAAAGGCAGATCCAAAAATTT
ACAATCTAAAGCAAACAAATCAATTACTAGAAAATAGTCTAATATTAATA
TTATTTTTAATTAAAGAGAGTTTTATTATTATTTAGTAAAAAATTTATGT
ATATATATATCTGGATATTGATCTTATCTAACTCTAATATGAAAATGAAG
AAAATTCACATACGCACACGGCACGTGTTGAATGTTTAATAATATAATAT
TCTTTAATTTGTTGTATATGTATATATATATACCTCAATCATTTCTTATG
TAAAAAAATGCACAATAGAAAAATACAGAACATTTATTATAATTTGAAAT
TGATTTCCTCTCTCCCATTACATAATTTTGTACACACCAATTGCCCCTTT
TCCTTATTTTGCCCTCTTGTAGTCAGACTCTGAAAGGACTCTCTTTTGCT
ATATATATATATATATACAATTATTTNTATACAATATTTAATAAATTTTT
TTTGTTAATAAGTTATCATAACGTATTCAAATCATTTATATATATATATA
AATATATATATATAATCTTTTCTTCTATTTTTTGAGCCAGCACCTAGTCA
GACAACCAACCTTACTTATTATAATTACTATTTTCGTTATGTCATGATGA
TTATGATGAAAGCAACAATAACAATATTGGGACTTCATTTCACAAATTAC
ATATATATATTTATATATAAGATCTTTTGTTACTTACTTCTAATTTGTTC
TTTGTTTGTTTATTTCGTTTTCGTTCTGAAAGGAGAGACCATTTATAAAT
AAATATATATAGAAACAATTATTATTCTTATTCGGACTTTATACATATAA
TAACAATATACTTATAATATACATTTAGTATGATATAATCATTTTTATGT
CTGTTAAATATTGTCTAAAATAACACAACTAAATATCATATGTTTATTTA
GTTAATTTTTTGTCATTAACAATGAAAATCGGTGTAGCTCTAACTGTATA
ATATGATATCCTTT

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