EMLSAT00000001663, EMLSAT00000001663-697510 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001663
Unique Name	EMLSAT00000001663-697510
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s128	supercontig	LSalAtl2s128:228134..234664 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001663 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001663	EMLSAG00000001663-684429	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000007322	EMLSAE00000007322-716250	Lepeophtheirus salmonis	exon
EMLSAE00000007323	EMLSAE00000007323-716251	Lepeophtheirus salmonis	exon
EMLSAE00000007324	EMLSAE00000007324-716252	Lepeophtheirus salmonis	exon
EMLSAE00000007325	EMLSAE00000007325-716253	Lepeophtheirus salmonis	exon
EMLSAE00000007326	EMLSAE00000007326-716254	Lepeophtheirus salmonis	exon
EMLSAE00000007327	EMLSAE00000007327-716255	Lepeophtheirus salmonis	exon
EMLSAE00000007328	EMLSAE00000007328-716256	Lepeophtheirus salmonis	exon
EMLSAE00000007329	EMLSAE00000007329-716257	Lepeophtheirus salmonis	exon
EMLSAE00000007330	EMLSAE00000007330-716258	Lepeophtheirus salmonis	exon
EMLSAE00000007331	EMLSAE00000007331-716259	Lepeophtheirus salmonis	exon
EMLSAE00000007332	EMLSAE00000007332-716260	Lepeophtheirus salmonis	exon
EMLSAE00000007333	EMLSAE00000007333-716261	Lepeophtheirus salmonis	exon
EMLSAE00000007334	EMLSAE00000007334-716262	Lepeophtheirus salmonis	exon
EMLSAE00000007335	EMLSAE00000007335-716263	Lepeophtheirus salmonis	exon
EMLSAE00000007336	EMLSAE00000007336-716264	Lepeophtheirus salmonis	exon
EMLSAE00000007337	EMLSAE00000007337-716265	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774894	auto774894	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001663	EMLSAP00000001663	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s128:228134..234664-

protein sequence of EMLSAP00000001663

>EMLSAP00000001663 ID=EMLSAP00000001663|Name=EMLSAP00000001663|organism=Lepeophtheirus salmonis|type=polypeptide|length=1771bp
MDSKMDEDHKWVYYDDSVHLTDFWNGLINSGHPDNPLEEWKCFSRSSSPE
KDLHLLSNPFFDYWRIQVPRLLSPNRGKNCLNQTFDEEEIAKLLIQPLEA
FIADSYDNSKEFFEELSQYDCPPSACGHTFLRTEPTYSCRDCGYDQTCVL
CNSCFENSIHKNHRYRVNTSNGEGYCDCGDEEAFKEGAICDIHLKYKEKE
ISHKEVLEKIPIDFRNRTKELFRQIFFYIFKAAQCRVKDNDFSVGVKEKQ
TWPELEYVFKYSNYCVVLLNDNAHSYNYVTKAIRENLGPGXSNKMASDIT
AYVDKHGRGILKVGNYRECVALCSRFDSKFNALSEFEQNVRCRVLPTCMI
AHQNFITRLLHWLNETLIPKCIVFRAILSEVIFYTDKPLNLILSKGRKCD
SICNAILVSDTDVWKEIRALWKNLISSGIMMDFESKKTLAKIYSKNYSEI
MESFVADNQEIEHSITTLSIQIYAVPSLVQQLLEEDNIFYKIIQCFYDQM
KNYIDIGSNGKDELNLQFWQGDDMSAFERSQNIPTDLSLILGLLPPKISE
KTRQNFLAGMEILTECLGLNPLTRQVHSHTEFENLDLERPYKITAFFTEI
MDHISKWCKQDKGILVGVVNILLEKCFRNEDGDNYIVKSVSLPFQEKTYE
IMDYNVSSMPVSVHLPIHRFLSKVIVGFGHFLSPGLVSKVKQRIENKGTL
IHLINPVLNSIVMLSQIHAGMWKRNGSAAEALTYIYLLPRALQCPKKDDL
IIVQLAASLASDPGLIIMSLMQRFRAVSWANGDLDKIEKKCPDFYEKNND
LIDEFLSFXXXILAIVCERQIISSTIESDELKFRIIQLMCIGPMKHSSII
NLIGCDKDIDSIIKNVADIKKDGSKMLYHIKEEFLSSYNPFYXFYSKEQR
SKAMENISKLHKKNNKYSFCPPPVLPPFPPLFEGLRYVLRSLPIINMLKV
NFERGSGNLNLNCKHIHKLLFLIDVGVQDDVREGIPRFVEMVEKINLITL
LRDKMKEWNELKDIFNFIIDNLSKARRDLLGVKEEESSAMDVSSSPIEND
KKRGEKMAAMRKAKLMAQMNQMQKRFALENARDLVEMDISNENDVDMEDT
RDVEYKNCIAVGVNRGVPRTVDKMYTCILCQENQKLFSQSTGSADALIMA
SYIQKSSVLSGDLNTHKFXPSKCFQDXLPSDLSIGPAIVSCGHTMHAHCY
QKFFSTLICKERERRIRRMINYDVSHNEYLCPICERLSNSVLPVVPPIST
FIPLLKSSSENLHTWVKRMKNILSNKQFDNNDEQKEESESLSAAHSSLND
AILSLKLKCTSSEHSTPNMEMPLMPTPLNDMCNAFAMAVFIKSLGSDPHE
GDHRVLQMLFQGLAYSIQLMDARSEMHLDISEREIETLRSLVRLCVSFPM
TTSSPSSQRRPMHKFFRSNVILLFSFILEPNDKTHTYNKSFLDIDAIEML
VFIIVGYSSFIFGEEDNQYHLGAQDFNILHLIFLVHLSQIATSIASLPRE
SFEENEEDDDDHVAQQFIERFGNGHKLPQTRGAATFLKKKSLRFLRCATL
FFHLYTDIPRGNSLYSYKELTRYMGLPGTLSELLHHSDRNEVLDNLVLAA
KHKTNIISYPSQPRQLIKLPKNYSTLLNDVIHYKCPSSANGEWKLPVLCL
ICGAIVCQFSHCCESVLDGRTVGGCTSHARKCSADVGIFLNIGECLITLI
VDGERGAFLSAPYVDEYGEYDDELRRGAPLFLDKEKYADLNKMWLNNSTS
DKICRCYDQEVLTINSDWHTL

mRNA from alignment at LSalAtl2s128:228134..234664-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001663-697510 ID=EMLSAT00000001663-697510|Name=EMLSAT00000001663|organism=Lepeophtheirus salmonis|type=mRNA|length=6531bp|location=Sequence derived from alignment at LSalAtl2s128:228134..234664- (Lepeophtheirus salmonis)
ATGGACAGCAAAATGGACGAAGACCATAAATGGGTCTATTATGATGATTC
TGTTCATTTAACCGATTTTTGGAATGGATTAATCAACTCTGGACATCCGG
ATAATCCATTAGAGGAATGGAAATGTTTTTCTCGTTCCTCAAGCCCTGAA
AAAGACTTGCATTTGCTCTCGAATCCCTTTTTTGACTATTGGCGAATACA
AGTCCCTCGTCTTCTCTCCCCAAATCGCGGTAAAAACTGCTTGAATCAAA
CCTTTGACGAAGAAGAAATTGCCAAACTACTGATTCAGCCCCTAGAAGCT
TTTATAGCCGACTCTTACGATAACTCGAAAGAGTTTTTCGAGGTAGTTTT
TTGATTCCTCAAAGTTATAATGAATTATAATTTTACGTGAGTGTTTTTGT
ATTGATTATAGGAGCTCTCACAGTACGACTGTCCTCCATCCGCATGTGGT
CACACTTTCCTTCGAACGGAGCCTACGTATTCTTGCAGAGATTGTGGCTA
TGATCAAACATGTAAGAGTACTGCATGATGCTGTCTACTACTTTGCCACG
AATTAATATTATTTTCCCCTTTATGCTTCTCATTTAAAAAAAACCAACAA
TCTTATTTTTAGGTGTACTCTGTAATAGCTGTTTCGAAAATAGTATACAT
AAAAATCATCGCTATCGAGTCAACACTTCCAATGGAGAAGGCTACTGCGA
TTGCGGAGACGAAGAGGCCTTTAAAGAAGGCGCCATCTGCGATATTCATC
TCAAATATAAAGAAAAGGAAATCTCTCACAAGGAAGTCCTTGAAAAGATC
CCTATTGATTTTCGAAATCGGACAAAAGAGCTTTTTCGTCAGATATTCTT
CTATATATTTAAAGCAGCTCAGTGCAGGGTTAAAGACAATGACTTTTCGG
TGGGAGTTAAAGAGAAACAAACCTGGCCTGAGCTTGAATACGTCTTTAAA
TACAGCAATTATTGTGTGGTCCTTCTTAATGATAACGCTCATTCTTACAA
CTATGTGACTAAAGCTATTCGGGAAAATTTAGGCCCTGGCTYCTCTAATA
AAATGGCCTCTGATATTACAGCCTATGTTGACAAGCATGGTAGAGGCATA
CTCAAGGTCGGAAATTACAGGGTAATTATTATCATCTTCATTTCTTTTAA
ATGTAGATGTTTATTTATTTCACGCAATTTTATACATTTTTAAAGGAATG
TGTTGCCCTTTGCTCAAGATTTGATTCAAAGTTCAATGCCCTCTCAGAAT
TTGAACAAAATGTAAGATGTCGTGTGCTCCCTACTTGCATGATTGCTCAT
CAAAATTTTATAACGCGGCTTCTTCATTGGCTCAATGAGACCCTCATTCC
TAAGTGTATCGTATTTAGAGCGATACTCTCCGAAGTTATATTCTATACAG
ATAAACCACTTAACCTCATATTATCTAAGGGGAGGAAATGTGACTCAATT
TGTAATGCAATTTTAGTAAGTGATACTGATGTGTGGAAAGAAATTAGGGC
TCTTTGGAAGAATTTGATTTCATCAGGTATCATGATGGATTTTGAGTCCA
AAAAGACTCTTGCAAAGGTCTGGAAATATGCTGAGATCCTCATTTACAAC
TTACGTATCTATTTTTCTTGATTTAGATTTACTCTAAAAATTATTCCGAA
ATCATGGAATCTTTTGTTGCGGATAATCAAGAAATTGAGCATAGTATAAC
AACGCTCAGCATCCAAATATATGCAGTTCCTTCCCTTGTTCAACAGCTCC
TGGAAGAAGACAATATATTCTATAAAATAATCCAATGTTTTTATGATCAG
ATGAAAAATTATATCGATATTGGAAGCAATGGGAAAGATGAACTGAATTT
ACAATTTTGGCAAGGAGATGACATGTCTGCATTTGAAAGATCTCAAAACA
TACCAACGGATCTGTCCCTTATTCTTGGTTTATTGCCACCTAAGATATCA
GAGAAGACAAGACAAAATTTTCTCGCAGGGATGGAAATTCTCACTGAATG
TTTGGTTCATATTCAGGCAAGTCTTAATTGGATTTAGAAAATAACTATAT
ATATATATATAGTTATTACTTAATATTATTTAAGTTATTANATATATATA
TATAGTTATTCTTAATATATTTAAGTTATGTTATTTGATTGATGTATCTT
TATAATATTTTGTATTGATACCTACAGGGATTAAATCCACTCACTCGTCA
AGTACATAGTCACACAGAATTTGAAAATTTAGATTTGGAACGACCTTACA
AAATAACAGCTTTTTTTACTGAGATAATGGATCATATAAGTAAATGGTGT
AAGCAAGACAAGGGCATTCTTGTAGGCGTAGTCAAGTACATATTTTGAGA
TTAAGTCATATATAATATATTAATCGATTTTTACAATTTTCATTTAAAAG
TATACTCCTTGAAAAATGCTTCCGAAATGAAGATGGAGACAATTACATTG
TAAAAAGTGTGTCTCTCCCTTTTCAAGAGAAAACATATGAAATCATGGAT
TACAATGTTTCCTCTATGCCTGTCTCCGTACATTTACCCATCCACAGATT
CCTTTCCAAAGTAATTGTAGGTTTTGGCCATTTTCTCTCCCCCGGTAATT
ATGATAATACAATTATATTTAAAAAAAATCAAGAATTAAAGCCAATGTAT
GCAAATTTTATACATTACAAGTTTAGTTTCCAAACTAAAAATTAAAGGCA
ATGTATATTTTATACATTACAGGTTTAGTTTCCAAAGTGAAACAAAGGAT
AGAAAATAAAGGAACTTTGATTCATCTTATAAATCCGGTTTTGAATTCGA
TTGTTATGCTATCCCAGATCCATGCCGGAATGTGGAAGAGAAATGGATCT
GCAGCGGAAGCATTAACCTATATCTACTTGCTTCCACGGGCACTTCAATG
CCCTAAAAAGGATGATCTTATAATTGTGCAATTGGCTGCTTCCCTAGCGT
CTGATCCAGGACTGATCATTATGTCACTCATGCAACGGTTTCGTGCTGTA
TCGTGGGCCAACGGTGATTTGGATAAAATTGAAAAGAAGTGCCCGGACTT
TTATGAGAAGAATAATGATTTAATCGACGAATTTTTGTCCTTTNNNNNNN
NNATTTTGGCTATAGTTTGTGAAAGGCAAATAATAAGCTCTACTATTGAG
TCGGATGAGCTAAAGTTCCGTATTATTCAATTGATGTGCATTGGGCCCAT
GAAACATTCATCAATTATCAATCTTATTGGATGTGATAAGGATATTGACT
CTATCATTAAAAACGTTGCGGACATCAAGAAAGATGGCTCCAAAATGCTT
TATCATATCAAAGAGGAATTTTTATCTAGTTACAATCCATTTTACTTWTT
CTACTCTAAGGAACAAAGATCAAAAGCCATGGAAAATATATCCAAGCTAC
ATAAGAAAAATAATAAATATTCATTTTGTCCACCTCCTGTTCTTCCTCCT
TTTCCACCTCTATTCGAAGGACTCCGCTATGTTCTTAGATCTCTTCCAAT
TATCAATATGTTAAAGGTTAATTTTGAAAGAGGCTCTGGAAATTTGAATT
TGAATTGCAAACACATCCACAAGTTACTTTTCTTGATAGATGTTGGAGTT
CAAGATGATGTTCGTGAAGGAATCCCTCGTTTTGTAGAAATGGTTGAGAA
AATCAATCTCATCACTTTGTTAAGAGATAAAATGAAGGAATGGAATGAAC
TTAAGGATATATTTAATTTCATAATTGATAATTTAAGCAAAGCACGAAGA
GACTTACTAGGCGTCAAAGAAGAAGAAAGTTCTGCCATGGATGTATCTTC
TTCACCCATAGAAAATGACAAGAAAAGGGGTGAGAAAATGGCTGCCATGA
GAAAGGCTAAACTCATGGCTCAAATGAATCAAATGCAGAAAAGGTTTGCT
CTAGAGAACGCAAGAGACTTGGTTGAAATGGATATATCGAATGAAAATGA
CGTTGATATGGAAGATACCAGAGATGTAGAGTATAAAAATTGTATTGCTG
TTGGTGTTAATCGGGGAGTTCCACGGACCGTCGATAAAATGTGAGTTTCT
CCTATTCTTTTTATAATTGAATGATTAAATCCTTGTTTCCTCTACATTAT
TTTGATTTCTTATTTTGCAGGTATACTTGCATATTATGTCAAGAGAATCA
AAAATTATTTAGTCAGTCTACTGGAAGTGCTGATGCCCTTATTATGGCCT
CGTATATTCAAAAAAGCTCAGTGTTATCTGGTGATCTTAATACTCATAAG
TTTKCTCCGAGTAAATGTTTCCAAGATTKCCTCCCATCTGATTTGAGTAT
AGGGCCTGCCATTGTGTCTTGTGGACACACAATGCATGCTCACTGTTATC
AAAAGTTTTTCTCTACTCTTATTTGCAAAGAACGAGAAAGGTATGTAAGG
TTGTTGTTCATGTGTATAAATTATTTGATGCTCCAATTCACGTATTTTAA
GACGAATTCGAAGAATGATAAACTATGACGTAAGTCATAATGAATATCTG
TGTCCTATTTGCGAACGTTTATCCAACTCTGTTTTACCCGTCGTCCCTCC
CATCTCCACATTTATTCCTCTTTTAAAGTCATCTTCAGAGAATTTGCACA
CATGGGTAAAGAGGATGAAGAATATTCTAAGTAACAAAGTGAGTGAGGAT
TACAATATCTATGATCAAGTGTAATGAAGTACCTAATCGATTTTCCTTTT
TTCAAATCTAGCAATTTGATAATAATGATGAGCAGAAAGAAGAATCAGAA
TCATTAAGTGCCGCCCATTCCTCTCTTAATGATGCTATTTTAAGTCTGAA
ATTAAAATGTACTTCGAGTGAACATTCCACACCGAATATGGAAATGCCAC
TGATGCCCACACCTCTGAATGATATGTGTAATGCTTTTGCTATGGCAGTA
TTTATTGTAATTTATTATTTTCAAAGTTTGTCAAGTTATTCATTTATGTA
CTTTGTTTCTTGAGTTTAGAAATCTCTTGGCTCAGATCCTCATGAAGGAG
ATCATCGGGTTCTACAAATGCTTTTCCAAGGTTTAGCTTATTCGATTCAA
TTGATGGATGCACGATCAGAAATGCATTTAGATATATCTGAAAGGGAAAT
TGAAACTCTTAGGTCTCTAGTACGACTATGTGTTTCTTTTCCAATGACAG
TAAGTTCATTTAGAAGCACTTATGTTTGTACTTAATTTCCCCCCTTCTAT
TTTACTATTTAGACATCTTCCCCATCATCTCAGAGGCGTCCTATGCACAA
ATTCTTTAGAAGCAACGTTATTCTGTTATTTTCCTTCATTTTAGAACCAA
ATGATAAAACGCATACCTACAATAAATCATTTCTCGACATTGACGCTATT
GAAATGCTGGTTTTTATTATTGTTGGCTATTCTAGTTTCATTTTTGGAGA
AGAGGATAATCAGTATCATCTAGGTGCACAAGTAAGAGAGAATATTTTTT
AAATTGCTATACTGTCTATGAATTAATAAATGCATCCTTCTTTCAAAATT
TCAGGATTTTAACATTCTTCATCTTATATTTTTGGTACACTTATCGCAAA
TAGCTACCTCCATTGCATCTCTTCCTAGAGAGTCTTTTGAGGAAAATGAA
GAAGATGATGATGATCATGTAGCACAGCAATTTATTGAACGCTTTGGGAA
TGGTCATAAATTACCTCAAACAAGAGGTGCAGCAACGTTTTTGAAAAAGA
AGTCACTACGTTTTCTCCGTTGTGCTACATTATTCTTTCATCTTTATACG
GATATCCCCAGGGGGAATTCTTTGTATTCATACAAAGAACTAACAAGATA
TATGGGCCTTCCTGGGACTCTTTCAGAGTTACTTCATCATTCTGATCGGA
ATGAAGTCTTGGATAATTTAGTTTTAGCGGCAAAACACAAGACCAACATT
ATTTCTTATCCCTCTCAACCTCGCCAACTCATTAAACTTCCTAAAAACTA
TTCAACCCTTCTTAATGACGTTATACATTATAAATGCCCTTCTTCGGCTA
ATGGAGAATGGAAATTACCTGTTCTTTGTCTTATATGTGGTGCTATTGTT
TGTCAATTCGTAAGAATTAGAATATTCTTGTTTCATTATTTATTAGCTGA
CACTGGATTTTTTTTAGAGTCATTGTTGTGAATCTGTATTAGACGGTCGC
ACTGTTGGAGGCTGCACTAGTCATGCCCGCAAATGTAGCGCAGATGTGGG
AATATTCCTTAATATTGGAGAATGTCTTATCACTCTTATAGTGGACGGTG
AAAGAGGTAATGAAATAATGTCTTTACAACTTGTGCGTGTCTCGATAAAA
TGAGCCAATCTTTTATTTTCTTCATTTTCAGGAGCATTTTTGTCCGCTCC
TTATGTAGATGAATACGGTGAATATGATGATGAACTCCGGAGAGGAGCCC
CCTTATTTTTAGATAAAGAAAAATACGCAGATCTTAATAAAATGTGGTTG
AATAATTCAACTTCAGATAAAATTTGCCGTTGCTATGATCAAGAAGTCCT
TACCATTAACTCCGACTGGCACACCTTGTAA

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