EMLSAT00000001739, EMLSAT00000001739-697586 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001739
Unique NameEMLSAT00000001739-697586
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s12supercontigLSalAtl2s12:1191390..1192460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001739 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001739EMLSAG00000001739-684505Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007678EMLSAE00000007678-716606Lepeophtheirus salmonisexon
EMLSAE00000007679EMLSAE00000007679-716607Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780513auto780513Lepeophtheirus salmonispolypeptide
EMLSAP00000001739EMLSAP00000001739Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001739

>EMLSAP00000001739 ID=EMLSAP00000001739|Name=EMLSAP00000001739|organism=Lepeophtheirus salmonis|type=polypeptide|length=337bp
MIVRIMPWNNSRLRRYLIISKRQLLLVPFLLALGLLCFHILIVRDLTDWS
PLSNRHAESYIKPHLETVLVFPSTRILARGEEVDVLGVIHSSPNHFENRD
VIRKTWLKDLKKMNGSSFKVVFLLGTKEMDSHSKSLLSSEIDSFGDIVVE
DFMDTYNNLTLKSIFMLKFIVRYNLKIKTLFKMDDDSYFNVERFPTIIDF
DSTAIRGFKYVQTYPIRYATIFTVASKWICPSWMYVDDIYPEYIGGAGYL
IPGSEIPKLYKSSFTTLFIHLEDVFLTGIIAKLNSVPRENIPSFLDKTGS
TCPKDITMLLFHPINPSKMKVIHQLIKEGDNTHCQWH
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mRNA from alignment at LSalAtl2s12:1191390..1192460-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001739-697586 ID=EMLSAT00000001739-697586|Name=EMLSAT00000001739|organism=Lepeophtheirus salmonis|type=mRNA|length=1071bp|location=Sequence derived from alignment at LSalAtl2s12:1191390..1192460- (Lepeophtheirus salmonis)
ATGATAGTACGAATAATGCCTTGGAACAATTCGAGACTCAGAAGATATCT
CATCATCTCAAAGAGACAGCTCCTTTTAGTTCCATTTCTTTTGGCTCTAG
GACTGCTTTGCTTTCACATTTTAATTGTGAGGGATCTTACAGATTGGAGT
CCTTTGAGTAATCGCCATGCAGAATCTTATATTAAACCCCATTTAGAGAC
TGTCCTTGTATTCCCTAGTACTCGCATTTTAGCAAGAGGGGAAGAAGTGG
ACGTACTTGGAGTCATACATTCATCTCCAAATCACTTCGAAAATCGTGAT
GTTATCAGAAAAACATGGCTGAAAGACTTGAAAAAAATGAATGGATCCTC
CTTTAAAGTCGTCTTTCTGCTTGGTACTAAGGAAATGGACTCGCACTCAA
AGTCTCTTCTTAGTTCTGAAATTGACTCATTCGGAGATATCGTGGTGGAG
GACTTTATGGATACTTATAATAATCTCACATTAAAATCCATTTTTATGCT
AAAATTCATTGTCCGCTACAATCTAAAAATCAAAACTCTTTTTAAGGTTC
CTTAATATTCATACGTTAGAAATGAACATCTAAGCTTATGTCTTCTTTTC
CAGATGGACGATGATTCTTATTTCAACGTTGAAAGATTCCCAACAATTAT
CGACTTTGACTCAACAGCCATCCGAGGTTTCAAATACGTCCAGACATATC
CTATACGTTACGCTACTATATTTACCGTAGCATCTAAGTGGATATGCCCA
TCTTGGATGTACGTAGACGATATTTATCCTGAATATATAGGGGGTGCTGG
TTACCTCATTCCTGGATCGGAGATTCCTAAGCTCTATAAATCCAGTTTTA
CAACACTTTTTATACATTTAGAAGATGTATTTCTCACAGGAATAATTGCT
AAATTGAATAGCGTGCCCCGCGAGAACATTCCCTCTTTCCTAGATAAAAC
AGGGAGCACCTGTCCTAAAGATATCACAATGCTACTCTTTCATCCCATAA
ATCCAAGTAAGATGAAAGTTATTCATCAGTTGATAAAGGAAGGCGACAAC
ACTCACTGCCAATGGCACTAA
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