EMLSAT00000001759, EMLSAT00000001759-697606 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001759
Unique NameEMLSAT00000001759-697606
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s12supercontigLSalAtl2s12:1706395..1709674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001759 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001759EMLSAG00000001759-684525Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007766EMLSAE00000007766-716694Lepeophtheirus salmonisexon
EMLSAE00000007767EMLSAE00000007767-716695Lepeophtheirus salmonisexon
EMLSAE00000007768EMLSAE00000007768-716696Lepeophtheirus salmonisexon
EMLSAE00000007769EMLSAE00000007769-716697Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780855auto780855Lepeophtheirus salmonispolypeptide
EMLSAP00000001759EMLSAP00000001759Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001759

>EMLSAP00000001759 ID=EMLSAP00000001759|Name=EMLSAP00000001759|organism=Lepeophtheirus salmonis|type=polypeptide|length=380bp
MLLEGVDLKSLTASLLRKCDVEEIAESIFLELVDEISLGIGFEVHRSVKI
GLFPLLDSDNSEPCSPSEAKKMGLCTNTMDVFGSVVTTAVGVPTLKKXPE
XXCPNCSRNLAASRFAPHLEKCMGMGRNSSRIASRRIASSSNNSNNSSSQ
NNSNSNSNSKDSHNSHSEQGSGGNAXSASCLDEDDAEDEDWIEPGKSFNR
KKRDKNSPRRNRAPKYGNSQGRGGILEQLFDGTITPPANYDQLSKEERSH
LLNNICGVTLHSKKLCTRSTRCQIHTDSQRREVRFKWLSNLGSGYDEETH
VDIDSFTEGDTAALRESLSILSNASSPADSTISNSSNPGNSRDSSSSRRT
TNKVGHRRGKRNNKGGSKSGXRASTPPHFD
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mRNA from alignment at LSalAtl2s12:1706395..1709674+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001759-697606 ID=EMLSAT00000001759-697606|Name=EMLSAT00000001759|organism=Lepeophtheirus salmonis|type=mRNA|length=3280bp|location=Sequence derived from alignment at LSalAtl2s12:1706395..1709674+ (Lepeophtheirus salmonis)
CTTGGTTTTGTCTTCCCTACTTCTTTCGTTCCATCCCTGCTCTCAGCAAT
GTCCCCGCACGCTCTATTCCCATTTTATTTGGTTTCATTCTCTTTATTAA
TTCTGAGCGGCCGGCGCATAACTCTCTCTTACTCTCTTTGCTCATTTATG
GAAATGTATCATATTTAGACAATCACGTGACGGACCTTTTTGAACTCCTA
GTAAGTATTTTTTTGGAATCGGTCCACCTTCCTGTCAGACCAAAACAAAG
GGTCTAATCCGTGACTTGTTGAGTTATTCTGAGGATCGAAGATGCTCCTA
GAAGGAGTAGATTTAAAGTCTTTGACGGCATCTTTACTCAGGAAATGTGA
CGTAGAGGAGATTGCGGAAAGTATATTTCTAGAGTTGGTGGATGAGATTT
CTCTAGGGATCGGGTTTGAGGTTCACAGGTGGGTTGATATTTGATACAAC
TGATACATGATTATCATGTTGCTCTGCTCACATCAGTTATCATTAATTAA
TTATATATCATTGACTTTAGGTCTGTGAAAATTGGACTCTTTCCTCTCTT
AGATTCGGACAACTCTGAGCCTTGTTCTCCATCTGAGGCCAAGAAAATGG
GACTATGTACAAATACAATGGACGTTTTTGGCTCTGTGGTGACAACGGCT
GTTGGAGTTCCCACTCTGAAGAAACNGCCCGAGMGTGMCTGCCCTAATTG
CTCCAGAAACCTTGCAGCCTCTCGTTTTGCCCCACATTTGGAGAAATGTA
TGGGAATGGGTCGGAATTCGAGTCGCATCGCCTCTCGTCGAATCGCATCC
TCCTCAAATAACTCTAATAATTCATCCAGTCAAAATAACTCCAACTCAAA
TAGTAATTCTAAGGACTCTCACAACAGTCATTCAGAGCAAGGGAGTGGAG
GGAATGCGAGMTCTGCCAGCTGTCTGGATGAAGATGACGCCGAAGACGAA
GATTGGATTGAGCCTGGGAAAAGTTTTAATAGAAAAAAAAGAGACAAAAA
TTCTCCAAGGAGAAATAGAGCCCCAAAATATGGAAATTCACAGGTACATC
TCCATTCCAAATAACTGTATAGAATTATTTAAATTAACAATCGGTGGATC
AAATAGATGGAAATACTATAATTCATTATTAGGAACTAATTAGTAATTGT
TGTAGTCTCTAAAGAAAGGACAATTGAACGGACTATTTTCTTTTTTTTTT
AAATATATGTTCTGGGAATTTAGCAAATGTAAACACGATCTGGGATTTTA
TTGTTATTCATCCTCTGAGTAGTTATGATCTCAGGTGATTTTTTTTTTTT
TCATAAATAACTTATTACAATAATTTGATATCCTTTTCATTTTAGTATAA
TTTTAATCCTTGCCACTTTTTTTATTTTTTTTGCGTGTATTCATTTTGTC
TTGTATCTATATTTGTATAGCATTCAGACTGTAACTCGTGATAACATTAT
TTAAATAGAAAATTTACTCTGTAAATTCTTAAGTCAATCACCAGAATGAA
TGTGCATAATTTGTTCATATTTTTTATTTCGTGACTTTTGAACTGACATT
ATTCAAATATACATGTTTTTAACTTATTTATTACATACTTGTTTTTGTCT
CTATATATTTTCGTCTCTTAACTAAAAACTATATTTGCCAAATTAAATTA
TTATAGATTTATAATTTTTTTCACACCCAACTTCCTAAGCCCATCAACAT
TGATCATGGTCGTAGCTGTTAGAATTTTTTCTTTTTTTAGCAATAATTTA
CATCTTGAAGTTGCTTAATCCTCATAAATATACATAGGAGCTTATTATTA
TTCATTTAGACTTAAGAGAACTCAAGTCCATCATTTGCTTAATCCGTATT
TCATTTATCATATACATATATTCATTTGACTCATGTAATGTAGTGATTTA
TACCCGTGCTGGATATAGGGCCGTGGTGGTATATTGGAGCAACTTTTTGA
TGGGACTATCACACCTCCAGCAAATTATGATCAGTTGAGCAAGGAAGAAA
GGTCTCATTTGCTGAACAATATTTGTGGAGTTACCTTGCACTCTAAAAAG
CTTTGTACAAGGTCCACACGCTGTCAAATACATACTGATTCACAAAGAAG
GGAAGTCCGGTTCAAATGGTTGAGTAATCTTGGAAGTGGATATGATGAGG
AAACTCATGTGGATATTGATAGGTAAGAAAGAAAGGAGTTTTCATCATCT
AAAATTACTAACAAATATGCCAAAAAAAAAGAAAATTATTACAAGTGTCC
TTGTACGTGAGAAGTAACTCAATCAATATTTGATTGTCCTGTTATTAAAA
GATACTCATATCCATGAATAAATCATTATACTTCCAGTGTTGTAGGAATC
ACAGGGCCCGAATATCTTGTGGCCTTCCAAAATAATTTGTTATCATCATT
TACCTCATAATCGATTATTTCCAGTATTTACCTATACTACCCTAACTTGG
AAAACAGTCCTATATGACATTTTGTCAAACCTGAGATATTGAGGTAAATG
CAAATTGCAACTCTCATCCGATGGAATTAATCATTGAAAGATAGTAGATA
GGGTTTATATCATCATTGATACCTAATTTAAAATGGATAGCTATCATAAT
TTCACAAACACCTAATATGGCCATAAATGTACGTAGGGCATTGATCCACA
AATTTGTTAATTAATAATAATCAGATAGGACATTTTCAGGCGATATTTTA
CTAAACACTATGAGTTCTCTCTTCATTAAGGATTTTGTAGTGTGGAATTA
GTGAGCATATTATTTACTATGTCCGTATTGGCAAAATATAAAATTATTAA
TATTCAATTAACCTTCTATTTAGTTCAAAAGAAACTTGTTATAGACTATA
AACTAAGAATTCGCTTTCCCAATTTATATGCTAATTTCTTCCCAAAGACC
CTATTGAAGATGACTTAGAATTCAATAATGATTGTTACACCAATCTTTAT
TAATACTTTGTTTAATTTAGTTTCACTGAGGGAGACACTGCGGCGCTAAG
GGAAAGTCTTTCTATTCTGTCAAACGCTAGTTCACCAGCAGATTCAACGA
TTTCAAATAGCTCTAATCCTGGCAATTCAAGAGATTCATCATCTAGTCGG
CGGACGACGAATAAGGTTGGGCATCGAAGAGGAAAACGCAATAATAAAGG
AGGATCAAAGAGTGGAAGMCGAGCTTCTACACCTCCTCATTTTGATTGAT
CATGGAGGGAGAATATTATTATTAATTATTTTTGGATACTATATTGTTTG
AATAAATTTGCTGATGAACAAGAATTAATA
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