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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s12 | supercontig | LSalAtl2s12:1854308..1859172 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001762 >EMLSAP00000001762 ID=EMLSAP00000001762|Name=EMLSAP00000001762|organism=Lepeophtheirus salmonis|type=polypeptide|length=1528bp
MPGGPLAPKKSCVEGKEPEMCDSGADCSMRDVEKTEDRSVFSSQVLDSAL
CDKDLRTSYVVPQSAAAQCISEKTTGMPLPQDEILPTDVGLNLGLGIKRK
MEMSEQHDDLNMPGAKRSKKPKTLSEKRVKLEEDIRKYXHAAVEKMYPRP
DRPPTSSVKRKRGPKSGIKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXKP
KPYGLDFKEIDAQLILRPFSHDKYIQQPEYNSVVYINRRKGMVPLSSLGK
DCQSVLSSDAKLLSGRNVSYGKPSLFVKEHGRVIAIGGSRNKENDSLKVI
PVPDIKSRLARSQSSLDFIPFYMDEEFTSFAVGAIYSPKKKPKIDIRTWK
KMKKNESDKVDLKEVLRKKSIVDHVYDKMLQSVPKKTEEENDPTTTTSED
GSKSQQYNDLDESEDRLFLSDDEEENERENTTTKSANESCKIFNKLLDST
SSFVNPLPDPEGCPVTSAEFRTALKERNSKTLTGYEICDIEDCFCRNAYT
LMEXSTPATDGTRTPESNIPTPIENKDQHVVKNLKKVKRALKTLGVNLVE
FDVTNGIRKDCDKDFCRLGCICETLSGSPVVPNHCCKIECMFRCHCSEET
LKKLSSSRKVAISPSAYTNFQDKSPPNVVTTDALTLESASQDFMSKSEDV
FNLDTILVPGKENPNIVKMISNGIRDGVSRKCTVLVPKINLSNLDISVKP
WCMYHCRHSCPCFKFENPLDYAPDLSKSRNVARRXSKLVSLICLDDEEKD
NDDNVEKETNNKNYKVRKDQCARTEGMCINPSYKLKMPHKFVTVKESAEA
EIKGDVISFKLPHDDKKTVIDLTLKPSKAVQYINWYILHYVFTHNIVRIW
YFTRNGKFVFFISRFSSPPYMKNSNNVKDLIKHTTDLSNLPIFARELMST
KKCESNSQKFAILTSSGIAWEITGILQKKGDKTTTPLNNKSIKEPSVVNL
ELSNQRLDPGQNXXXXTVVQADIAVMQIKLPQTSSNQYWCTLRVPIGEES
VPCPETSISLKTIIIKQAADLANSENTTVRIPIEATSVGSSSFGIYAVPC
LKKHVFIGPYIVKEVKEFETSSEIDCGLKEEEEDITIIPTIQTPTSNSGC
RRKQKLTTKYDEIDRINNEKIITSLVELVADTAVVFGERRKKRRRFSHRP
IMGSVPSVVSKEKTIEEISVIEEEKNGSKLQSDILKETSTNNEIPNYRNL
PNSDYGIIVTGQIDAKFKCVIDIDIPNQENLKVFKNSIGSDRVQFYHPSF
PKHIVMCKDVINARKWMEEYITLAERHSSPLLQPSILKSRLMRCRRKVKK
EALTEEQRQEYIQLFYKLRRSMLPEHDASLMYNRVQVIDYATILIQDLKK
KVQDQEKVKKELLTLRSGLFDEFTSKLKGLPIDLKKKFVYDLKTGLKKGK
PSPEXQQPASLXPPPVAIIQRSFTNKKVSNAMPDLIPIHGDIEGPSKSAX
TTKTLPPPEEKKNRKPLNAFMLWAKKQRPKFVSSGLSTGELSRMLVDKWH
QLSQKERQQYQIEAARLKKLNSNMESSD back to topmRNA from alignment at LSalAtl2s12:1854308..1859172- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001762-697609 ID=EMLSAT00000001762-697609|Name=EMLSAT00000001762|organism=Lepeophtheirus salmonis|type=mRNA|length=4865bp|location=Sequence derived from alignment at LSalAtl2s12:1854308..1859172- (Lepeophtheirus salmonis)
ATGCCGGGTGGTCCACTTGCACCAAAGAAGAGTTGCGTTGAAGGGAAAGA
GCCTGAAATGTGTGACTCTGGGGCGGATTGCAGCATGAGGGATGTGGAGA
AGACAGAGGATCGATCCGTCTTTTCTAGTCAAGTCCTGGACTCGGCTCTG
TGTGACAAAGATCTGAGAACTTCATATGTTGTGCCGCAAAGTGCTGCGGC
ACAGTGCATTTCTGAAAAAACGACAGGGATGCCCTTGCCCCAAGATGAGG
TGAGGAAGCCGCCGCCCGGACTCAAGCTCCCATTCAATAACAAACTTCAA
ATTCTATTTCAGATCCTGCCTACAGACGTGGGCTTGAACTTAGGCCTAGG
AATCAAACGGAAAATGGAAATGAGCGAGCAGCATGATGACTTGAACATGC
CTGGGGCTAAAAGAAGTAAAAAACCCAAGACTCTGAGTGAGAAAAGGGTG
AAACTGGAAGAGGATATTCGGAAGTATGMTCATGCTGCCGTTGAAAAAAT
GTATCCAAGACCAGACAGGCCGCCCACTTCAAGTGTAAAAAGAAAGCGGG
GCCCCAAGTCGGGAATTAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAACCTAAACCTTATGGTATGTCAGAATTATGTACTTTTTACT
TTTTTATCATGATTAGGATTGATATATACATATATGACATCCTTTCTTTC
AGGTTTGGATTTCAAAGAGATTGATGCTCAACTCATACTTCGTCCGTTTT
CACATGATAAGTACATTCAACAACCGGAATATAATAGTGTAGTGTATATC
AACAGACGAAAAGGAATGGTTCCTCTCTCTAGTCTAGGTAAAGACTGTCA
AAGTGTTCTTTCTAGTGATGCTAAGTTACTGTCCGGAAGAAATGTTTCTT
ATGGAAAACCAAGTCTTTTCGTCAAAGAACATGGACGAGTCATAGCCATT
GGAGGAAGCAGAAACAAGGAAAATGATTCGCTCAAAGTTATTCCAGTTCC
AGATATCAAATCTAGACTTGCAAGGTCACAATCCTCCTTGGATTTTATAC
CATTTTATATGGATGAAGAGTTCACTTCCTTTGCAGTGGGTGCTATCTAT
TCTCCAAAAAAGAAACCAAAAATAGATATACGCACATGGAAGAAAATGAA
GAAAAATGAATCGGATAAGGTTGATCTTAAGGAAGTTTTGAGAAAGAAAT
CCATCGTAGATCATGTTTACGATAAAATGCTACAATCTGTCCCTAAGAAA
ACAGAGGAGGAGAACGATCCTACAACAACAACCTCTGAAGATGGTTCTAA
AAGTCAACAATATAATGACTTGGATGAATCCGAAGATCGACTTTTTTTAA
GTGACGATGAAGAAGAAAATGAGAGAGAAAATACTACTACTAAGAGTGCC
AATGAGTCATGCAAAATATTTAATAAGCTTTTAGACTCTACTTCTTCCTT
CGTCAACCCCTTACCAGATCCAGAAGGTTGCCCTGTGACATCTGCTGAAT
TTAGAACTGCTCTAAAAGAAAGGAATAGTAAGACATTGACAGGCTACGAA
ATTTGTGATATTGAAGATTGTTTTTGTCGAAATGCATATACTCTAATGGA
GGKTTCAACTCCAGCAACAGACGGAACTCGCACTCCTGAAAGTAATATTC
CTACACCCATTGAGAACAAAGATCAGCATGTTGTCAAAAATCTGAAAAAG
GTTAAAAGAGCTTTAAAGACCCTTGGTGTTAATTTAGTGGAATTTGACGT
TACGAATGGAATTCGAAAGGATTGTGATAAAGACTTTTGCCGACTTGGAT
GTATTTGTGAAACTTTATCGGGAAGTCCTGTCGTGCCCAATCATTGTTGT
AAGATCGAGTGTATGTTTCGGTGTCATTGTAGTGAGGAAACTCTAAAGAA
ACTATCATCCTCTCGTAAAGTTGCAATATCACCATCAGCTTACACAAATT
TCCAGGATAAGTCCCCACCCAATGTTGTGACAACAGGTGGGAGAGATCTT
ATTATGATTGCAGGTCGACAAAAAGAGAACGTAAGATGCCCACGAGGTAT
CAGGATACAGACGCTTTGACACTTGAGTCTGCTTCTCAAGATTTCATGAG
TAAATCAGAAGATGTTTTTAATCTTGATACTATATTGGTTCCCGGAAAGG
AGAACCCAAATATTGTCAAGATGATCTCGAATGGAATTCGAGATGGAGTT
TCCCGTAAATGTACTGTCCTTGTACCTAAAATTAACCTATCAAACCTCGA
CATCTCTGTTAAACCCTGGTGTATGTATCATTGTCGTCATTCCTGTCCCT
GCTTCAAGTTTGAAAATCCTTTAGACTATGCGCCCGACTTAAGCAAATCT
AGAAACGTGGCTCGAAGGKCTTCTAAATTAGTGTCATTAATATGTTTAGA
CGATGAGGAAAAGGATAACGATGATAATGTTGAGAAAGAAACAAATAATA
AAAATTACAAAGTACGTAAGGATCAATGTGCTAGAACGGAGGGCATGTGC
ATCAATCCATCTTATAAGCTTAAAATGCCGCACAAGTTTGTTACAGTCAA
AGAGTCAGCAGAAGCTGAGATTAAGGGTGACGTGATATCTTTTAAATTAC
CTCATGATGACAAAAAGACTGTCATTGACCTTACACTCAAGCCTAGTAAA
GCTGTTCAATATATTAATTGGTATATACTTCATTATGTATTCACTCACAA
TATTGTAAGGATTTGGTACTTCACTCGTAATGGCAAATTTGTATTTTTTA
TCTCAAGATTCTCAAGTCCTCCATATATGAAAAACTCTAATAATGTCAAG
GACTTGATAAAACATACTACGGATCTTTCAAATTTACCTATTTTCGCCCG
GGAATTAATGTCTACAAAGAAGTGTGAAAGTAATTCTCAGAAATTTGCTA
TTCTTACCAGTAGTGGAATAGCGTGGGAAATCACTGGAATACTACAGAAA
AAAGGTGACAAGACAACAACTCCTTTGAATAACAAATCCATAAAAGAGCC
ATCAGTTGTTAATTTAGAATTGTCTAACCAAAGACTCGATCCAGGTCAAA
ATTNNNNNNNNNTGACAGTGGTACAAGCTGATATAGCTGTTATGCAGATT
AAGTTACCACAAACGTCTTCAAATCAGTATTGGTGTACTTTACGAGTCCC
TATCGGGGAGGAATCTGTTCCTTGTCCTGAAACTTCCATATCACTTAAGA
CAATTATAATTAAGCAAGCTGCAGATTTAGCTAACTCTGAGAATACAACT
GTAAGAATTCCTATCGAAGCAACTTCCGTTGGTTCGTCTTCATTTGGGAT
TTATGCTGTCCCTTGCCTTAAAAAACACGTTTTTATCGGTCCCTATATAG
TAAAGGAAGTCAAGGAATTTGAAACATCGTCTGAAATCGATTGTGGGTTA
AAGGAGGAGGAAGAGGATATCACAATTATTCCTACGATCCAAACTCCTAC
CTCAAACTCAGGCTGTAGAAGGAAGCAAAAACTGACAACAAAATACGATG
AAATTGATCGAATTAATAATGAAAAAATTATAACTTCTTTAGTTGAATTA
GTTGCAGATACAGCAGTTGTATTTGGGGAACGTCGTAAGAAACGAAGACG
TTTTTCTCATAGACCCATCATGGGATCGGTCCCCTCAGTTGTTTCCAAAG
AAAAAACTATTGAAGAAATCTCAGTAATTGAAGAAGAGAAGAATGGTAGC
AAGTTACAATCAGATATTTTAAAGGAAACTTCTACAAATAATGAAATACC
AAATTATAGGAACTTACCTAACTCAGACTATGGCATAATTGTAACAGGAC
AAATTGATGCTAAATTCAAATGTGTAATTGATATTGATATTCCTAATCAA
GAAAATCTTAAAGTGTTTAAAAACTCCATTGGTAGTGATAGAGTTCAGTT
CTACCATCCATCTTTTCCTAAGCATATTGTCATGTGCAAAGACGTGATTA
ATGCCAGAAAATGGATGGAGGAATATATTACACTAGCTGAAAGACATTCT
TCACCTCTATTGCAGCCAAGTATTTTGAAGTCTAGACTTATGAGATGCAG
AAGAAAAGTTAAGAAAGAGGCTCTGACTGAAGAACAGCGCCAAGAGTATA
TACAATTATTCTATAAGCTTAGGAGAAGTATGCTGCCGGAGCATGATGCT
TCCCTCATGTATAATCGAGTTCAAGTTATTGATTATGCAACCATTTTAAT
ACAGGATTTAAAGAAAAAGGTACAAGATCAGGAAAAAGTTAAAAAAGAGT
TGTTAACTCTGAGATCTGGTCTTTTTGATGAATTTACATCTAAATTAAAG
GGTTTACCCATTGACTTGAAAAAGAAGTTTGTCTATGATTTAAAAACTGG
GTTAAAAAAAGGCAAACCAAGYCCCGAAYCGCAGCAGCCCGCTTCACTGA
AMCCTCCGCCAGTGGCAATTATTCAGAGGAGTTTTACAAATAAGAAGGTG
TCTAATGCTATGCCAGATCTTATTCCCATTCACGGGGATATTGAAGGGCC
TTCTAAATCTGCASCTACCACTAAAACACTGCCGCCGCCCGAAGAAAAGA
AAAATCGCAAGCCATTAAATGCATTTATGCTATGGGCAAAAAAGCAGAGA
CCAAAATTTGTATCATCTGGGTAATTAGAAAAAAATATATATATAGTTAA
TTATAAACTAAAATGTGTTATCTTTTTCTTTCAAGACTTTCGACGGGCGA
ATTATCCAGAATGCTTGTTGACAAGTGGCATCAACTTAGTCAAAAGGAGA
GACAACAATATCAGATTGAAGCCGCACGCTTAAAAAAATTGAACTCCAAT
ATGGAGTCTAGTGAT back to top
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