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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s1314 | supercontig | LSalAtl2s1314:111717..117623 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
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| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
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| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001823 >EMLSAP00000001823 ID=EMLSAP00000001823|Name=EMLSAP00000001823|organism=Lepeophtheirus salmonis|type=polypeptide|length=530bp
MMTQQRRGLSIHSLPFCLSLFLFLTLSPTTSSSGKISYVESITDHKAFKK
LLRTKNNVLIHFSSEKENSVNDLLDRSSVGIKGIGTIGSVDCSAHGKLCK
KLKISFDGAESSSILKHYQNGKYHLDYNRSLKLESLVYFIKXPTGDIPWH
EDPHAYHVHHLTDPSSFKKFIKSSENQKILVMFYAPWCGFCKRLKPIYQK
AAETVMTDIQGAAMAAMDVNRPENAPIRKKFNITAFPTILYFEGNEMRYQ
YPGENDADSFVNFLKNPSPEDEIIPKKAIQLGWKDEDTSTVVHLDNGSFD
EVISKETSINVMFYAPWCGHCKKMKPHFSAAANRLHDEGVDGKLGAVDCT
SEDALCKRLGVKGYPTVKYFKNGKFEFDSGHAREEKTIVEFMKNPNEPPP
PPPPEKKWSEEISEVVHLTTGSFKSFLKRKKHVVVMFYAPWCGHCKKAKS
EFGSAAELFRDNPRTEFAAIDCIDEKTICSDYNVSGYPTFKYFSYFNKNG
TPLEYNGGRSRKDFIKFMEDKIKALKKDEL back to topmRNA from alignment at LSalAtl2s1314:111717..117623+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001823-697670 ID=EMLSAT00000001823-697670|Name=EMLSAT00000001823|organism=Lepeophtheirus salmonis|type=mRNA|length=5907bp|location=Sequence derived from alignment at LSalAtl2s1314:111717..117623+ (Lepeophtheirus salmonis)
AAAATCTAAAACATCAAATAAGAACAATCATAATAATATAAATTTATTCA
TTATAGGAATCTAAATTTTAATTATAAAATCAATATCAGAATATGACGAT
AATAAATTAAGTAAACACGAAAATATCTTAATAAGACATTTGTGAACATT
TTCCGAGGAAGGAATTATTGAAATTTGGATAGGGGGGGGGGGGAGGGGGA
GCACAAGAGATTTTAAGYCCAATAGAATAACAAATGGCAGATACGATTAA
TGCATCAATTCTGTTTAACTTCTCAAAATTGATGATTTTTTTCCTATAAA
AATTTATATCAAGTGAATAAAGAAAAAATATCCTATGTAATATACAAATT
TACGCATTCATGCCTGGTGATACTCCCCCTACAGCCCCAGGAGGATCATC
ACTATCATTCTGATCTGAATAAACGTTAAGTGAACCTCCTACTACATTAA
GTGCTCCAAATGCAGCTCCTCTGATGACAGGATTTCCTCCCGCGTCCAAA
TGGTCAATAGAAGGATCCGCGGTTGCTTCTGCTAAATTTGTGACTGACTT
GGATTTTACACATTGAAAATCAACGTGACGGGACTTATTCTCTTCTTTTT
CCCAAGACATATGAATGAAAGGCCTTTGTACATAGTTGTAGATGACCTCA
GCCTTGCCTTTGGGTCTTCTTTTCACCTTTTCTTTGTGTGTTGGATGTCC
TTCGATACCTAATTTCACTTTTTTAAGACCTCTCTTTCGAAGTACATGCT
TTGCAACATCTCTATTTTCAACATATCTAAAAAATCTATACATAGGACTA
GAGACAATAGTCTGAGTGTATTCTTCTCCCATTTGAGGAGGAAAGGCCTC
ATCCCAATCAATTTGATCTTCATCTACGAGTATAACAATGTGGCATTCTC
GATCTCCCCTGGTTGCACATATAACCATCTGAGGAAGAATATATTCTTGA
AGAAAGCTTTCAAATCTATTCTGAGCTCCTTCATTGCTTAATTCGTGAAG
GAGACCCCTCAAATCTCTACATCGCACGGTGGAAGAGGAGAAAGGAATAA
GAAAGTAGTCACAAGCTTCTCTGAGCTCAGCTACAGAGACATGGCTTGGA
CAATGGACGACTCCTGTCTCGTAAAATCCCAGGATGGCTTGAAAGACGGA
CGCCGAGATTCCTTCTCCCATTTCATACTCCCCATGGGAATTGGGGTGAA
ACTCGAAGTGAGAAGTCGGAGAAAACATACGGCCTAACATGGTGTCAGGG
TGCGTTAAAGCAAAGACTTTGGGGTTCACCACAAAGCGTGTCTCATCCAA
AACAAGTGTGATCCGCTCTTCAGATGTTGATCCAGATTTGGAAGCATTTC
CAGCTCCTCCACTTCGAGGGGAAGGACCACCCCCTTTCCCAACAAACAGC
CTTTTCCGCTCGAACTCTTCATCCTCCGAAGAAGAACCGTTATCTGAGAA
TGCATCCGCAGACATTCCTTAAGTCCAACAACGGAATTGGATTCGCCCTA
TACTAGTATAAACTAAAGTGATTCCTTATTTAGAAGTGATGCGTGATTAC
TGATCAGTGATTAGTGATTTCCGTGGATGCAGGATGGCTCAGAAAATAAC
AATAGTTCAAACTCATAGATCAAGGCTTGCTTCTTCTTGGTGCGTGTAGC
TCACTCTTCTTCTCTCATGACGTCACTTAGGACTCCAATCACGCACTACG
CACTCAATTCACTTTCCCCTCTAGGCGCTAGCTCTCCACCAGCGCAGTAA
AACCTTAGAATACAATCTACCTCGCGCACTCACTCCGAATCTAAGTTAGT
CGCTCGCTCGCTCATTCTCACTCTTCAAATTTCACCATCATTCATCGTGC
TCTCTATCTTTACCTCCCAGCTCTTGTCTGTTAGTACGTCTTCTTCTGCC
TTTTCTGAGTTCTCCGATGACGTCACAGTCCGTGTCTCATCCAACAGCAA
GATTGAATTGTTATTGTATGAATCTACCGGAGACAGAGGCCTTAACGCCA
GGATGATGACCCAACAGAGAAGAGGTTTATCCATTCATTCGCTCCCATTT
TGTCTCTCACTCTTCTTGTTCCTCACATTAAGCCCCACGACGAGTTCCTC
CGGCAAAATCTCATATGTGGAGTCCATCACGGATCACAAAGCATTCAAAA
AGTTACTTCGTACAAAGAATAATGTTCTCATTCATTTTTCGTCAGAGAAA
GAGAACTCAGTGAATGACCTATTGGATCGCTCTTCTGTGGGAATTAAAGG
GATTGGTACGATTGGGAGCGTGGATTGCTCCGCGCATGGCAAGCTCTGTA
AGAAGCTCAAGATATCCTTTGACGGAGCGGAGTCTTCTTCCATTCTTAAG
CATTATCAAAACGGAAAATACCATTTGGACTATAATAGATCGCTTAAGTT
AGAGTCTTTGGTGTATTTCATCAAAGMCCCGACTGGAGATATTCCATGGC
ATGAGGATCCTCATGCCTACCATGTTCATCATCTCACAGATCCTTCTTCC
TTTAAAAAGTTTATTAAAAGTAGTGAAAACCAAAAAATACTTGTCATGTT
TTATGCGCCATGGTGCGGATTCTGTAAGAGACTAAAACCCATCTACCAAA
AGGCGGCAGAGACAGTGATGACTGATATTCAAGGAGCAGCTATGGCTGCA
ATGGATGTCAACAGACCTGAAAATGCCCCTATTCGTAAGAAATTCAATAT
AACGGCCTTTCCCACAATATTGTATTTCGAAGGGAATGAAATGCGCTACC
AATATCCTGGAGAAAATGATGCTGATTCATTTGTCAATTTTTTAAAGAAT
CCCTCTCCAGAAGATGAAATTATTCCGAAAAAGGCTATTCAACTAGGATG
GAAGGATGAAGATACTTCTACAGTAGTTCATTTGGACAATGGTAGCTTTG
ATGAAGTCATTTCCAAAGAGACATCCATTAATGTTATGGTAGGGAGAATG
AGACTATCCTTGTTGAATAAACATTTGTGTTTGACTTAGTTACTTATTTT
ATTTATAGTTTTATGCACCTTGGTGTGGTCATTGTAAAAAAATGAAGCCT
CATTTTTCAGCTGCTGCAAACAGACTTCACGATGAAGGAGTTGATGGTAA
ACTTGGTGCAGTGGATTGTACGTCAGAAGACGCATTATGCAAGAGGTAAG
GATTTAAACATGTTTGTATATTGATATTGATCTCATTTGGAAATTAAAGA
AAATGGGATCAATAACCTTTGTCCAATAAATATTAACTTAAATATAATTT
ATATCATAAGGCTTGGAGTAAAGGGATATCCTACCGTAAAATATTTCAAG
AATGGGAAATTTGAATTTGATTCTGGACATGCAAGAGAAGAAAAAACTAT
TGTTGAGTTTATGAAAAACCCAAATGAGCCTCCTCCGCCACCCCCTCCTG
AGAAAAAATGGTCAGAAGAAATCTCAGAAGTTGTGCATTTAACCACCGGC
TCTTTCAAATCCTTCCTAAAAAGGAAAAAACATGTTGTAGTCATGTTTTA
TGCTCCCTGGTAAGTAATAATACTAACACTAATGGTATTCGGATTATCCA
TTGTTAAAATGTTATATTTTTATTGATGAAGGTGTGGTCACTGTAAGAAA
GCCAAATCGGAATTTGGATCTGCTGCTGAGTTATTCAGGGATAATCCGAG
AACAGAATTTGCAGCTATTGACTGTATCGATGAAAAAACGATTTGCAGTG
ACTACAATGTTTCTGGGTATCCAACCTTCAAATACTTTTCATATTTCAAT
AAGAATGGGACACCCTTAGAGTATAATGGAGGGAGGTCAAGAAAGGACTT
TATTAAATTCATGGAAGACAAAATTAAAGCATTAAAAAAAGATGAATTAT
AATGACGATCCTGGTGCTAATTAGTTATACCATTAATTTATTAATACTCT
CCTGTTAATATCTTTTGTTAAAAATAATTAATCTTAATTTTTATATTTAC
GCTTGACAGACGAATTATTTATCTACATAAAAGGAAATGAAAAAGTGTCC
CTGTGTTCGTTTTTTATCTTTAGTAGGTATCTAATAACTAATAAGTAATA
TATTACTATATAGAATTGATCTCGCATAATTTACCGGCCATATACTTTTC
TTCTTAATCATTAATATTATGAATGGATGATTCAGTAATGACGTCATGTA
ATTGAAAGACAAATGAAATAAGAAAAAAGGGGTGAAATTATTATTATACG
TACTTACTATGTACAGAATAAGCCAATGGACTGAGTATTTAATATACATA
TTTATTAGTATAGAGTGCGGGAGAGGGGAAAGAGAGGGCCGAAAGAAAGA
GAAACAGTAAGAGAAGATGAAATTANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCATATTAAATAAAATAGGCAGCTGAGCATAAAAGCT
GCTGCTGCTCCAGGAAGAAGCAAAAAGAAGGAAAGGAGAAAAGWGATTGA
GCTGCTAGAAGTGGGTGCTGATCAGCGGTGGACGGGATTCTCTTCCCGGT
GGATTCTTTAGGATATTTCTTACTCATTTTCAGTGTACAKTATTCTCATT
AGAATATGTTGAATTTGTTTACCTTAAAGAAAGAGAAGCAAGAGAATGCA
TCTGGGGCGTCTGGGGATAGTTGCAGTCAAAAGAAAAGAGCCTCAGCTGC
TCAGTTGAGAATTACCAAGGACATTAACGAATTGGAGCTTCCTAAGACCT
GCAAAACGGAGTTCCCTGACCCGGATGATCTTCTACAATTTAAACTCTAC
ATTTGCCCCGATGAGGGATATTATCGGGACGGGAGATTTGTTTTTACTTT
CAAAATCGGGGCCAGTTATCCCCACGAACCACCCAAGGTTCATAACATAA
TTTATTATCCTTCATATCACCATTCCCTTCTCGCCCTCATTTGACAATTA
GTCATCCCTTTACACTTTCCATTTCATCATAATTAACCGTTTATCTGCGT
TTTCATTCCAATACATTTATTTAACAACTTCTTAGCTTCACAAATTGTTG
TTATTTAAATGGCTAGAACCAACTTTGTATGAAATGATGGCGAGGAATTC
ATTTCCTATTTCATCCCAAAAATATATTTTTTTTTTTTTCTTAGGTTAAA
TGTGAAACCAAAGTGTACCATCCGAACATTGACTTAGAAGGAAATGTATG
TCTTAATATTCTTCGTGAGGATTGGAAACCTGTACTAACAATAAACTCGA
TCGTTTATGGTTTACAATATTTATTCCTTGAGCCCAATCCTGAGGATCCA
CTTAACAAACAAGCTGCGATAGAATTGCAACGAAGTAGACGTGAATTTGA
ATTTAGTGTGAGATGTGCTATGAATGGTGATCCAATTAACGGGATTGTGT
TCGAAAAATGTCTTAGAAATTCCTTCTTTAATTAAAATTATAATTCTTAC
AAATCTGTTTTTTTTAATATAAAAATCAAATTTAAAAAAATACACACCCC
TATAACATATAATTTATTTAGGACAAAATGAGGACGCTAAATATAAACAT
GTGAATATTTTAATGTTAACGATACTCTACGAAATGAAATAACAAGGGTT
TTAGGTAGGCTCAATTATTACCATTACAGACATTGCCTTATTAATGGTTC
GAATCATAATATTTTTTTTCTTTTTTTCTATGATTTGATTACTAGAAATA
TACGTGTTTCTTACCATCACCTCAGAACTCAAACCTTCAACTAGGCTAAT
AAATTATTTTATTTCTTTAAGTGGACCACATCTAAATTCCTCGTTTTCCT
TATTAATTCTTGGACCCATTAGCTCATTGGATTTGAAGCAATCATTAATT
GATGACGACTGAACTTTTTAATTACATAATATAAATATTCGTTCGAAAAA
TATCTGACCATTTGATAAAAATTAAATTTATTTCAAAATAAATTCATCTT
TTCTTCC back to top
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