EMLSAT00000001859, EMLSAT00000001859-697706 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001859
Unique NameEMLSAT00000001859-697706
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s131supercontigLSalAtl2s131:789411..790752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001859 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001859EMLSAG00000001859-684625Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008179EMLSAE00000008179-717107Lepeophtheirus salmonisexon
EMLSAE00000008180EMLSAE00000008180-717108Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779725auto779725Lepeophtheirus salmonispolypeptide
EMLSAP00000001859EMLSAP00000001859Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001859

>EMLSAP00000001859 ID=EMLSAP00000001859|Name=EMLSAP00000001859|organism=Lepeophtheirus salmonis|type=polypeptide|length=329bp
MKMRQSSLLVLLHISTLWVFSCESSSIAGLRHYRRTTPCQCINLFSCLLR
GGRADRSCSFLGFCCEFEETPRVSSVLPFRHYGFHPPAGIKSAGHCTTYC
GDDLNDPDVTGFLGXCXNEXPQELLTYKVLLGVYDQLGDQEYPYDSYHAR
LIIRHPEYRNVIRVLDNGFIESEPRYDIALLYLDREVASRPNVAPICLPT
SASLPYPADHNLATVVGWGRTGSSEESPHSRVLQAVTVPMFESQDCGRLT
GLFTFPDQLCAGGANSTSSACPGDSGGGLQQQNEKGRWVLVGIVSXGPST
CGIQPVVYHKVGHTLSWIKSVVEDLRFTP
back to top

mRNA from alignment at LSalAtl2s131:789411..790752-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001859-697706 ID=EMLSAT00000001859-697706|Name=EMLSAT00000001859|organism=Lepeophtheirus salmonis|type=mRNA|length=1342bp|location=Sequence derived from alignment at LSalAtl2s131:789411..790752- (Lepeophtheirus salmonis)
ATGAAAATGAGGCAAAGCTCTCTTCTCGTATTACTTCACATTTCCACTCT
TTGGGTCTTTTCCTGTGAGTCATCATCCATAGCTGGACTTCGTCACTATC
GACGTACTACTCCATGTCAATGTATAAATCTCTTTTCCTGTCTCCTGAGA
GGTGGAAGAGCGGATAGATCCTGTTCTTTCCTAGGATTCTGTTGTGAATT
TGAAGAGACTCCTCGTGTATCTTCTGTCTTACCCTTTCGACACTACGGAT
TTCACCCACCTGCTGGCATTAAATCAGGTAGATCCCTTTTTCAGAARCCT
CCKCCCTCTTTCAACKCCATTGCTTCCACTTCGTTTGAGCCTCCACAATG
CGGTCTTTCACAAAATGCTCAAAGAAAAATCATGGGGCGTCTANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGAGATGGGTAGTCACAGCTGGGCATTGCACCACCTACT
GTGGTGATGACTTGAATGATCCGGATGTGACGGGCTTCCTGGGGYACTGT
AWCAATGAAATSCCACAGGAACTCCTCACCTACAAAGTCCTTCTTGGCGT
GTATGATCAACTCGGAGATCAAGAGTATCCCTATGACTCTTACCATGCAA
GGTTAATCATTCGGCATCCTGAATATCGTAATGTGATTCGAGTCCTTGAT
AATGGATTCATTGAGTCAGAGCCCCGCTATGATATAGCACTCCTGTACCT
GGATAGAGAGGTTGCATCTCGTCCAAATGTGGCTCCAATTTGTCTCCCAA
CCTCTGCGAGTCTTCCATATCCTGCAGATCATAATTTAGCAACAGTTGTG
GGATGGGGAAGAACTGGAAGTTCCGAAGAATCTCCTCATTCACGTGTCCT
TCAGGCAGTGACTGTTCCCATGTTTGAGAGTCAAGACTGTGGTAGATTAA
CTGGCCTCTTTACATTTCCAGATCAGCTATGTGCAGGAGGAGCTAATTCA
ACTTCTTCAGCATGTCCTGGAGACTCAGGAGGAGGACTCCAACAGCAAAA
TGAAAAGGGACGTTGGGTCCTTGTTGGTATTGTTTCTAAMGGKCCCTCAA
CGTGTGGAATCCAGCCTGTGGTATATCATAAAGTGGGACATACTCTGAGC
TGGATTAAAAGTGTTGTTGAGGATTTGAGATTTACTCCTTGA
back to top
Add to Basket