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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s1352 | supercontig | LSalAtl2s1352:46169..52532 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001979 >EMLSAP00000001979 ID=EMLSAP00000001979|Name=EMLSAP00000001979|organism=Lepeophtheirus salmonis|type=polypeptide|length=1042bp
MDISLSSASGMKRKMSSSGGDSLSSGTKRRKSGRKSLNGTDSENDCYCWI
CHKEGEVICCETCPRVFHLKCIQLETAPTEDWVCPECVLIMTAENMDTRS
RAMRLLSVDQLCTLLKHALTRLRNISGVDPFIRSVDPXQFPAYRDYVTCP
MDLLTLEKNIRKKQYGSTEAFLADLKWILHNCIIFNSLGSKLTSIAKQLV
KICKHEMQEVENCPDCYMNAHTKKDSWFIAACRIPHLLVWAKLKGFPFWP
AKAMRXNSDDHVDVRFFGAHDRAWVPCTLPFDLGPIRTRARSLSFSGSER
SHSRTPTPTEDESRVTKVGGKIDEERIEGTTKIVSVISTKIXQPLKEIEA
EEDDSKLELEADDEEEVDDVEEEEVDDVEPESAEQPKIDKKTVMSSDRVA
ASPPCEVSSTTTSASDTTSNAGKQPLESQKKKSSVVEETSKPEPKLAVIA
ETSETVIIEGDEDEEEEEEEIDDDEEAVINDAEIDDVEPETVEEQNTRPS
DEKIISDAPKKDALSSKESSPPKEDSDKSTTTTSDEGKLDNTNADVEMTS
DNEFTSNVNEDSPENKGKSVSKEEEIDDVEPDAYVDAEEEEINDVEEMPE
KPSKSTEDLQLESKSDENKNDDNTEVCSDSVDTSRLLASGVSVTIKSKPI
QTTTSHSKKSQSSSLDVVSGDSKRNDGKTENEKQKNSESDDPKDGLSSEL
SLGSDISVTVVQKKKDFNAPIPPRISVKKESELLAGSSDKPRDIVHVSRT
RKTTPTQIRKSVDESEGEKNPPDPIVTISKVQALVSAVTSSKLETLKNAP
PLTSQQSRKSSNAPSATTTVNHSSRTSSSSNGPLVNMLGAPRMIPPQHHQ
HRSRAMSQNSILRGPPVSGQSGHPMGMPSLHPRPQGFFSVPPPLPSAAGP
VSEQLNRVAGKLVDYMRLSLEELFREMASSGSPXATIKALQIEIEKIQWR
HQQELAETRHNAELKFQELQHAMEAEKQKIISDLKKQAELDKQKAVTEAK
KKQWCSHCGKEAIFYCCWNTSYCDYPCQVIIIVYLFLPLLYY back to topmRNA from alignment at LSalAtl2s1352:46169..52532+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001979-697826 ID=EMLSAT00000001979-697826|Name=EMLSAT00000001979|organism=Lepeophtheirus salmonis|type=mRNA|length=6364bp|location=Sequence derived from alignment at LSalAtl2s1352:46169..52532+ (Lepeophtheirus salmonis)
AAATAAGCTCATACGGGCTTATAAAATCATGCGAAAGCCCTCTACCAATT
TGACGCCAGATCTAACGATGTGATCTGAGCTAATGGAGCATATTCCTTTT
TTTCTCCTTTAAATTCAAAATGGAGGATCTGTGATAGAAAAGAGGAAAAA
AAAGAAAAAGGAGAGAAAAGACAAAAAGCTGGCCGAATGGAAAGAAGGGG
ATGAAAGGAAGGAGCGACCTCTCTTCTAAGAAGTATCTCTAGCTAGAAAA
GATGTTTGATAGATGTCTCTAGTTGCTTTGAAGATCTCTAGCTCTTCCTA
CTTTTTTCCCCCAAAAAGCCTTGGATGCTCTGCTTGCTGCTGATCTACGT
CCATACTCTGCTCTTTCTTCTTCTTGTGATTGTTATCGTGATTCTTCTTA
CAGTTATTTGTTATGATTATTGGGAGTCTTTAAAGTTACAAGTTTCTGTT
TCTTGACTACGTTACTTTTCTCTCTTTTTTTTGTCTTTCTCTTGTGGCTC
TTGTGGGTCTTGTAGCTTTTGCCTATTTTTGATTTCCTATCTTTTGGCTT
KAGATCGTATTCCGTGAGGKAAGATAGTAGAAAGGGTTGTTGAGGATGGA
GAGCGTGCCCCGTTTCTGACGTGTGTGTAGGGCCTTGAGTGATGGATATC
AGCCTGTCCTCCGCGAGCGGAATGAAGCGCAAGATGTCCTCTAGCGGGGG
GGACTCGTTGTCCTCTGGGACGAAGAGACGGAAAAGCGGGCGGAAGAGCT
TGAACGGAACGGTAAGAGATGAAAGGTGTTTGTTGATGCCTGGCTGCTTA
TATTCCTGGCCTTGTTTCAGGACTCTGAGAACGATTGCTACTGTTGGATC
TGTCATAAGGAGGGAGAAGTGATTTGCTGCGAGACGTGTCCACGCGTGTT
CCATTTGAAATGCATTCAGCTGGAGACGGCGCCCACGGAGGATTGGGTCT
GTCCGGAATGTGTTTTGATCATGACTGCGGAAAACATGGACACCCGGTCT
CGTGCCATGCGATTGCTCTCTGTGGATCAACTCTGCACACTTTTGAAGCA
CGCCCTTACTCGCCTACGGAATATATCAGGCGTGGATCCCTTCATTCGAT
CTGTGGATCCCWTTCAATTTCCAGCCTATAGAGACTATGTAACTTGTCCC
ATGGACCTTCTTACCCTCGAGAAAAACATTCGCAAGAAGCAGTATGGATC
CACGGAAGCCTTTTTGGCGGATCTCAAATGGATACTTCACAACTGTATTA
TTTTTAATTCTCTGGGCTCAAAACTCACAAGTATCGCAAAGCAGCTTGTC
AAAATCTGTAAACATGAAATGCAAGAAGTTGAAAATTGTCCGGATTGCTA
CATGAATGCACATACGAAGAAGGATTCTTGGTTTATTGCAGCATGTGTGA
GTTTCATTTTTGTCCAAAGTGTTTGTGTAGCTTCATCCAACATTTCTAAT
ATCTATATAATTAACCCTGTTTTCTCTTTAAATAGAGAATACCTCATCTG
TTGGTGTGGGCGAAATTGAAAGGATTTCCATTTTGGCCAGCGAAAGCCAT
GAGAGKCAACTCGGACGATCATGTTGATGTTCGATTTTTTGGTGCGCATG
ATCGTGCTTGGGTTCCTGTAAGAGATGTATACATTTACTCTATGGAACCA
CCAGTGCCAATGAAAAATAAAAAGAAAGGGAATTTTGAAGGCTGTGTACA
GGAAGTTGAATTATACATTAAAAAAATTACAGATAAATTTGGCGAATTTG
AGTATGCACCCTCAAAGACTCCATTCGATTCTAAAAGAGAAGAAGAACAA
ATCAAATTATTGTATCCTAAGGTACGTATATAAATTTATGGATTTGCTTT
ATTTATAAAAAAAATAGTATACACTTACTTATAGTGTACTTTACCTTTTG
ATCTTGGACCTATTCGTACAAGGGCAAGATCTCTCAGTTTCTCTGGTAGC
GAAAGAAGTCATTCTAGAACCCCGACACCCACTGAAGATGAATCTCGTGT
TACCAAAGTTGGTGGTAAAATAGACGAAGAGCGAATAGAAGGAACCACTA
AGATTGTTTCTGTCATTTCTACTAAGATTMCTCAGCCTCTAAAAGAAATA
GAAGCTGAGGAGGATGATTCGAAGCTTGAACTTGAAGCAGACGATGAAGA
AGAGGTTGATGATGTAGAAGAAGAAGAAGTTGATGATGTTGAGCCTGAAA
GTGCGGAACAACCCAAAATTGATAAGAAAACAGTAATGTCCTCAGATAGA
GTTGCCGCAAGTCCTCCCTGTGAAGTATCAAGTACAACAACTTCAGCCTC
GGACACTACGTCCAATGCTGGCAAACAACCCTTAGAGTCTCAAAAAAAGA
AGTCGTCTGTTGTTGAGGAAACTTCGAAGCCTGAACCGAAGTTGGCTGTT
ATAGCCGAAACTTCTGAAACTGTAATAATCGAAGGGGATGAAGACGAAGA
GGAGGAAGAAGAGGAGATCGATGATGATGAAGAAGCCGTCATCAATGATG
CAGAAATCGACGACGTAGAGCCTGAAACAGTAGAGGAACAAAATACAAGG
CCCTCTGATGAAAAAATAATTTCGGACGCGCCAAAGAAAGATGCTCTATC
CTCCAAGGAGTCTTCTCCCCCTAAAGAAGACTCTGATAAATCCACCACTA
CTACTTCTGATGAAGGAAAGCTTGATAACACTAATGCAGATGTGGAGATG
ACTTCTGATAACGAGTTTACTTCTAATGTTAATGAAGATTCCCCTGAAAA
TAAAGGGAAATCTGTGTCGAAAGAAGAAGAAATTGATGATGTTGAACCAG
ATGCTTATGTCGATGCTGAAGAGGAGGAAATTAATGATGTGGAAGAAATG
CCTGAAAAACCTTCCAAATCCACTGAAGATCTTCAACTTGAATCCAAGTC
TGATGAAAATAAAAACGATGATAATACAGAAGTTTGCAGTGATAGCGTTG
ACACATCTAGGCTATTAGCATCTGGAGTTAGTGTTACCATTAAATCAAAG
CCTATTCAAACTACTACTTCTCACTCTAAAAAAAGTCAGTCCTCCTCACT
TGATGTTGTGTCTGGTGATTCGAAAAGGAATGATGGTAAAACAGAAAATG
AGAAGCAAAAAAATTCAGAATCGGATGATCCTAAGGATGGTTTGAGTTCT
GAGTTATCTCTTGGAAGTGATATTAGTGTTACTGTCGTTCAAAAGAAGAA
AGATTTCAATGCTCCTATTCCTCCTAGGATTAGTGTTAAGAAAGAAAGTG
AGCTCTTGGCTGGTTCTTCAGACAAGCCTAGAGACATTGTTCATGTTTCT
AGGACTAGAAAAACCACACCTACTCAGATTCGTAAAAGTGTAGACGAATC
CGAAGGTGAAAAAAAYCCTCCTGACCCAATAGTAACCATATCGAAAGTAC
AAGCCCTTGTTAGTGCTGTTACTTCATCAAAACTAGAAACCCTAAAAAAT
GCTCCTCCTTTGACTTCTCAACAGTCTCGTAAATCATCTAATGCTCCTTC
TGCTACAACTACCGTTAATCATTCATCGAGAACGTCTTCCTCATCTAATG
GACCTTTAGTTAATATGCTTGGAGCTCCTCGTATGATTCCCCCTCAACAT
CATCAGCATAGGAGTAGGGCAATGTCTCAAAACTCCATATTGAGAGGTCC
TCCTGTTAGTGGTCAAAGTGGACACCCAATGGGGATGCCTTCACTTCATC
CTCGACCTCAAGGTTTTTTTTCTGTTCCCCCTCCATTGCCTTCAGCTGCT
GGACCCGTCTCCGAACAGCTAAATAGAGTGGCTGGAAAATTGGTTGATTA
CATGAGACTTTCACTTGAGGAGCTTTTCAGAGAGATGGCAAGTTCTGGAT
CTCCTRAAGCCACTATTAAAGCTCTTCAAATAGAGATTGAAAAAATTCAA
TGGCGACATCAGCAAGAACTTGCGGAAACGAGGCATAATGCTGAACTCAA
GTTTCAGGAGTTACAACATGCTATGGAAGCAGAAAAACAAAAAATTATAT
CAGATTTAAAGAAACAGGCTGAACTTGACAAACAAAAGGCTGTAACTGAA
GCGAAAAAGAAACAGTGGTGTTCACATTGTGGCAAAGAAGCTATATTTTA
TTGCTGTTGGAACACATCTTACTGTGATTATCCCTGTCAGGTAATTATTA
TTGTTTATTTATTTTTGCCTCTGCTTTATTATTAAATTTGTTACTTTTGC
AATTTATGATTTCAGCAAGCTCATTGGCCAAATCACATGTCTACCTGTGC
TCAAAATCAAGCAAACAATGACGAAGATGGGTTGAATGTAAGTGGAAATA
ATTCCTCAGCTTCTGAGATATCCCAGTCTCATTCATCCGAAACTATTGAG
CATAATAGTCCTGGACATTTCTTGTCTGCACCTTCAGTATGTTTAGCTTT
CTCTAATTTTGAATACCAAATATAAGTTTGTTTTTAAGGGTCCTGGTCCA
AGTAGAGGTCCATCAAATGGAATCATGCCTCCTCATTCAAGGGGAATGCA
GGTGAGCTTATTTAATATATATGTTGGGTGCAAGTCCCGATGTATGTACA
AGTTACTCTTGTATAAGCAAATTATATAATTAGCAATTTCTTGGTCTTAC
AATGGATTATTTAAATACAACATTAATCATTCTAATTACTATTAATTGAT
GCTATTATTTCATTTTGATTTATTAAAATTACGCATTTATGATGTTTTAC
GAGCTATATTAGTGAAGGCTTTTGAACTTTATAATGTACCCCATAATACT
TATATTTCAGTCATTTGTATTTCAATAGTCAAAAATTGTCATCCATGGAA
TATTCAATCATTGCATTATCCTCATCCCAATGTACACTTAATCCTTCATT
TAAAATGCACAGTAACTTTTACAATTTGCTTATTCAATTTACAACTTTTA
TAATCAAATTGTATAAATTGAAAATGCATTCGTATTAAAATGTATTATGT
AATTACTAACTATTAATTGATACTATCATTGCATTTAGATCTATTAAAAT
TATTCATTTACTATGTATTTACGAGGTAAATATTTGAAGGCACTTGAACT
TTATTATGTGCCACACAATACGTCTATTTTAAACAGTTGTATTAAAATAG
TCAAAAATGATATCTTTGCAACCAAAAAATGAGATGAAAAATTTACAGTA
CTTAAGATGAGGATAATGGACTAATTAAATATTCCATGGATGATCGATAT
CTTGATGCACGGATTACTTAAATTCTGCATACACACATAACCTCTTTAAT
AGAGCCTTGGAAATGAAAAATAAAAATTTTAAAAGAGAAAAATTATTTTT
TGTTAAAAAGTGAAAAATCATGAACGTGCAAAGGATTTATCCTATCGTCC
ACTGAAAACTTATTTCTGATTTAAGTAATTAATTATGGACAGAGGAAAGA
TTTTGTCTTAAAATTCAATTTTTGGGGGGGTCAAACTTGAAAGAGTGATC
CAAGAGCAATTGTCATATATTCTTTAATTAGATCAAAGAAAGAGCTTTTT
TTGCTGGCTGGATCTCTTATTTAATCTCATTGTAGGAAGATATTTTTTGA
GGGAGTATCCATGAGTAGTGTTGAGTGGATCCTTATTTAGAACTGCAATC
CAGTCCAGTTTTGCATATTAGACCTAAAACTTATAAAGTTCGATCCTTGA
TGACGCCACTCAACTTTATTTCTTCTTTTTTTAAATCAGTTCTAGTACAG
ACAGTCCTATCGGCTGRTAGGGKCATTCCTAAGAMTGAACTGGRCCGAAT
AAATAATTACTGACAACGCTATCCATGAGATATAGTTATTATATTGTCAG
TTCCTTCATAGTTAATCATATTCCTCTTGTATTGGAGAAGAACGTCTCTT
CATGAACCTTTTTTATCTATAGAATACTTTACCTTAAGTAATTCCTGATC
CGCCTTAACGATAAAATAAAATAATTCGTTGAATCAAAACAGCAATGGTT
ATAATAATAGAAAGGTTGTGTAATTTTAGAAGTGAATAGTTTACCCAGAT
GTTGAGTAATCCATGATTGATTCTGTTATTTTTGAATATTTTAATACAAA
TGACTAAAATATATGTATTTTGTGACACATTATTAAGTTCAAATGCAATC
AGTAATATCACACACAGATAGATAATAACCATGTCATTTTAATAGATGAA
AAGGAAATGCTTCTATCTACGTATAGTTGGTAACTAGAATTACCAATGCT
GTAATTAAATAATGTATTTTAAGACGAAGAAACTACAACTTGCACACAAC
ACATATATATATATTTATGTAAATGTGTTATTATGATACTCAAATATTAA
TTTATAGCCTATGATGATGCCATTTGGTCCGTCTGGTATAAACCCTCGCC
TCATGAGCCAAATG back to top
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