EMLSAT00000002013, EMLSAT00000002013-697860 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002013
Unique NameEMLSAT00000002013-697860
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s135supercontigLSalAtl2s135:683680..686597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002013 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002013EMLSAG00000002013-684779Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008881EMLSAE00000008881-717809Lepeophtheirus salmonisexon
EMLSAE00000008882EMLSAE00000008882-717810Lepeophtheirus salmonisexon
EMLSAE00000008883EMLSAE00000008883-717811Lepeophtheirus salmonisexon
EMLSAE00000008884EMLSAE00000008884-717812Lepeophtheirus salmonisexon
EMLSAE00000008885EMLSAE00000008885-717813Lepeophtheirus salmonisexon
EMLSAE00000008886EMLSAE00000008886-717814Lepeophtheirus salmonisexon
EMLSAE00000008887EMLSAE00000008887-717815Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779320auto779320Lepeophtheirus salmonispolypeptide
EMLSAP00000002013EMLSAP00000002013Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002013

>EMLSAP00000002013 ID=EMLSAP00000002013|Name=EMLSAP00000002013|organism=Lepeophtheirus salmonis|type=polypeptide|length=616bp
MILFYFIISIFIICSIKADDSSKKYCTTQACNDTAKKLLLNINPSINPCE
DFYQYACGGFVNRTVIPPGRKGIDIASELTRKLNKQLKTVLEANSSSNEP
GAFITARNFYKSCVNESQIEVQGLQPLKDILSKLGGWLNSTHNESNISGI
KYDWRNDANLEQKSIADLYNKMSIKNLSNLNPCVPWLDYINIFLTKELIQ
VNGSDEIIVTEPYYVRNLYNVMKNTSLKVVNNFVRWKIVQNSIPYLNKEA
SIIREKYISKIYGTSGPIDRSLICVEEANKNLQNAVGAMYVRSFFKNGSK
EDVEEMIGNTREVFYQMIIESDWMTNGTKASALEKALAMFNHVGYPAEYL
DNDTLTERYNGLELNSLDYFGNKHRIWTFDLDFSIKSLNKRVNKTSWIYN
GESAVVNAYYSTDENSLIFPAGMLQGMFFSVDRPTYLNLGGIGWIIGHEI
SHGFDNVGSQIDKDGNLFNWWDNVTAQIYEEKIKCLKYQYGNYTVESVNV
TVDGEYTLEENIADNMGIRNAYLTFLKWKTSQTERNIEYLPGFDNYTINQ
AFWLSAANDYCIKMTSKTEKQRAETLPYAPEIYRIIGSFSNQPEFSSDFN
CLAGSKMNRTEKCKLW
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mRNA from alignment at LSalAtl2s135:683680..686597-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002013-697860 ID=EMLSAT00000002013-697860|Name=EMLSAT00000002013|organism=Lepeophtheirus salmonis|type=mRNA|length=2918bp|location=Sequence derived from alignment at LSalAtl2s135:683680..686597- (Lepeophtheirus salmonis)
ATGATACTCTTCTATTTTATCATCTCGATATTTATCATTTGTTCAATCAA
GGCAGACGATTCTTCAAAAAAGTATTGCACAACTCAAGCTTGCAATGACA
CTGCAAAAAAGCTCTTGCTTAACATTAACCCTTCCATCAATCCATGTGAA
GATTTTTACCAATATGCATGTGGAGGATTTGTAAACAGGACTGTAATTCC
TCCCGGCCGAAAAGGAATAGATATTGCTTCAGAATTAACTAGAAAGCTTA
ACAAACAGGTGATATTTATTAACGTGAAACATAATCAATCATTTCTTACA
ACTGTAAATCTTTTGTTTCATAGTTAAAAACAGTGTTAGAGGCCAACTCA
AGTTCAAATGAACCAGGGGCTTTTATAACAGCGCGAAATTTCTATAAATC
ATGTGTCAATGAAAGTCAAATTGAGGTTCAAGGGCTTCAACCTCTAAAAG
ATATCCTTTCCAAACTAGGGGGATGGTTAAATTCAACACATAATGAGAGT
AATATTAGTGGTATAAAATATGATTGGAGGAATGACGTGAAAAAGTTTCG
TAGACATGGATATTCTAGGAACCAGTTAATTGACATTTCAATTCAAAACG
ATTATAAAAATTCTTCTAGAAAAACTTTAATTCTGGATACACCCGATTTT
GAAATATATGATGATCAAGTAAAGATAGAGTTTCTTTCAGTTATTTAAAC
TATTAGGTCTATTGCAGGCATATTTTGAGTACATGAATGATTCTGCTCAT
CTTCTTGGACATAATACCTCGGAAATAGAAAATGATTTGAAAGACATTTT
AGAATTTCAAATTAAATTATCTAACTTAACAAAGGCGAATTTGGAACAAA
AAAGTATTGCGGATTTATATAACAAAATGAGTATTAAAAACCTGTCTAAT
TTGAATCCTTGTGTGCCATGGCTGGATTACATCAATATTTTTCTAACCAA
GGAATTGATTCAGGTATGATTTCCATCAAACTATATTTAATAAAGGTACT
TCTAAATTTAATATTTGCTTTAAAGTAATGGTATGAGTATTTTGAACTCA
TTATCTGATAACTTTTTAAATACTATTTGAGAAAAGGAGTTAAATAAAAA
TAATTATAAAACGCTAATTTTTAGATAACTTACAAATGAGATTACTTCGA
AATAATCGAACAACAGTTACTTACTTAGTCATTAACGTTGCACAATATTG
ATAATAGTTAATGCATTTTAGGTGAATGGATCTGATGAAATTATTGTCAC
TGAACCTTATTATGTAAGAAACCTTTATAATGTGATGAAAAATACATCTT
TAAAGGTTGTAAATAACTTTGTTAGATGGAAAATTGTACAAAACTCAATT
CCATATTTAAATAAGGAAGCGAGCATTATAAGAGAAAAGTATATCAGTAA
AATATATGGGACCTCGGGCCCTATAGATAGATCGTTAATATGTGTCGAAG
AAGCAAATAAAAATTTACAAAATGCTGTTGGAGCAATGTATGTGAGAAGT
TTTTTCAAAAATGGGTCTAAAGAAGATGTTGAAGAAATGATAGGAAATAC
TAGGGAAGTGTTTTACCAAATGATAATTGAATCTGATTGGATGACGAATG
GAACAAAAGCTTCAGCATTAGAAAAAGCTCTTGCAATGTTCAATCATGTT
GGATACCCTGCTGAATATTTAGATAATGATACTCTGACAGAAAGATATAA
CGGTCTTGAATTGAATAGTTTAGATTATTTTGGAAATAAACACCGTATTT
GGACATTTGATCTCGACTTTAGCATCAAATCACTAAATAAAAGAGTGAGT
AAATTTTGAGTTTCGTATTTTATTTGTTCTTATGCGTAAGTTTGACAGGT
TAACAAGACAAGTTGGATATACAATGGTGAATCCGCTGTTGTCAATGCTT
ATTATTCAACAGACGAAAACTCTTTGATATTTCCTGCAGGAATGTTACAA
GGAATGTTTTTCTCTGTAGACCGTCCAACTTATTTAAATTTAGGTGGCAT
AGGATGGATAATAGGGCATGAAATTTCTCATGGGTTTGATAATGTTGGGA
GTCAGATTGACAAAGATGGTGAGTTCTATTCCATGTTAAAGTTTGTATTT
GTAAATTATTTTTATAAAAAAGAAAAGTTATCCCTATTATTATGTAATGT
CAATTTGACATTATAGTTCCAATTTATGAACCAGGATCCGTTACACAATT
AGTTTCTTCCTGCACAATTATAATTTATGAATAAGTTTAGTCACGGCACT
ATTTAAATGTTTTCCTATTCATTTTTTTCATTAGGTTTAACTTTTAAAAT
GATTCTTAAGCCTTGATAATTTAAATAATAATATTATTGGTTTATCATTA
TTTGCCATCTAATTTTATAAAATGTATTCGTATGGTTTTTAAGGTAATTT
ATTCAACTGGTGGGATAACGTCACAGCACAAATATATGAAGAAAAAATTA
AATGCCTCAAATATCAGTATGGAAATTACACTGTAGAAAGTGTGAATGTA
ACAGTTGACGGCGAATATACTTTAGAAGAAAATATTGCGGATAATATGGG
AATTAGAAATGCGTATCTGACATTTCGTAAGTCATCAATCATTGTAGTAG
TTATTAGATCAATTTTATATCGATTCTCTAACAAATATATTAGTGAAATG
GAAAACGAGCCAAACTGAGAGAAATATAGAATATCTACCAGGATTTGATA
ATTATACAATTAATCAAGCATTTTGGCTGAGTGCTGCAAATGATTATTGC
ATTAAAATGACCTCGAAAACAGAAAAACAAAGAGCTGAGACATTGCCTTA
TGCCCCCGAAATTTATAGAATAATTGGATCCTTTTCAAATCAACCCGAGT
TTTCGTCCGATTTTAACTGTTTAGCAGGTAGCAAAATGAATCGAACAGAA
AAATGCAAACTTTGGTGA
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