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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1361 | supercontig | LSalAtl2s1361:43077..48755 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002016 >EMLSAP00000002016 ID=EMLSAP00000002016|Name=EMLSAP00000002016|organism=Lepeophtheirus salmonis|type=polypeptide|length=1892bp
MSEEEPPIDESLTLCLSQIQRFYYYSILLKEETEKKYSNCVLEFTQISTN
TLFCYIVTMIQVYLMISNSSKNSARSANGSGGICFGLEGINNGPIHARYV
SHHFISAIYIFQFIVALFSAVEVVCFWSKTNIFMAXSFVDSFLFIVSIIA
SGAYFVSVEKRHLRYSIPLFLHYGANTLIQGFCLLENSDFRYIRTWCAFL
LSTSYGLQFIFGFIGIIQRLYLRLVSNMDGPVYSKRPVIPQSHVYLYNEA
SSFSRLTFWWLNPILTQGYRAPLEIDDLHKLPKEERTKKYFQKLKTLLSR
DKSSILWECITMNWSFVILGGLFRLFADILGYACALSINIIVNSIAAENE
NASLHLISNVTINPLKDTRYYDSFFVSELFFDPRVVSIVIFLAALGQGAL
SQTSNHLLTVSGIRAKNALHVLLYEKSLKLPVGSSNPMQIHRKINLKPLN
DEGKGCMGGSCSLDEDYSNEGNIDIGFITNLASEDIINIRELIWNVHYIW
ALPLKILVLLFLLYDQLGISGVSGAILGTCVILPLQVLTGKLMSENNKLI
LCSQDNRLFKSTETLASMKTVKLATMEEWALKRIRCARTKELIFLRRDSF
LWSFMAFLASISTTLVTTLTLGLFVLLEDHNFTAADLFTSMALLSQLTVC
LSVVPVTVPIFIKGKVSTQRLAEFLNRAEVSIYKQNNKLNKHCTYFDDRK
DDDEEEEEEEEESEIFIQRAKRLPETCFTVENGTFAWPKCETNVLQSINL
EIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNVPDTVALLGQR
PWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGER
GVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKI
LLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQGTIQDVTRLCPELLS
TKLSKNRLSRISDDNKGLVEGKTAQERWKLLRNVTKLGIKVKNKNTPKKK
SQLQLNKSDDNFPLEISPVNSLLIRRHRSHSGGTSSGSSGGSFLFGKSLS
QLPSSASSCKLYRSHLRIDSRSQSNXTHDLLLPSDEYIDYSLTEEEPSFC
RVKKLSKINNGNNLFARTLSWNTNSNELSVSTSSSMNRSVVRRAKTPPNR
PSNHAGEFQRMRSFIVNTNKNINLTSNRNAGGRSSLHRDSMVLSNLMPMH
SNSEPEGFITDTVAPLKRRSIVLEPPHNRVMRLTSNSSQISSISGFSDDF
FDEEEDEEGLVYKSQGGQSHENREYGSIDIGVLTVYFKAGGIFLAGFFVI
LSFVLQSVKVYMDFLLRDWSMEEKNSDKLIAYFSFYGSLSVIVILISCVA
NLIGQLIGARARTKLHNDMIQNIMYCPLELFEAFPIGRIINRISHDIFIV
DQKIPPCIQRLIMLSFVCIAALAXNSIQSPVFLIFALPMISIYWWLXHFY
RRSSRELQRLDSITRAPVLSHFSDTLSGLITVRAFGEQTRFINELCEKVD
TNTSAFLILQSGCRWLGVYLDAAGAIFVFLSILVNLFFPRKGREVTSSAS
IGLSVNYSLLVPIYLAWVVKFAANIENYMNAVERVLEYTHFPSEEEDFSE
FQAVHASSMNSSRRSFLLRGRGKHDEIEEDVRVSGDFLQNDSEGLIIRFN
SVCLAPSFEYRRLPGIQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRL
SRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNLDPEND
FSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKA
LLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVE
YERVLVMGEGRILEDGNPKELLKKPMGFFSALWRAAGEKPLS back to topmRNA from alignment at LSalAtl2s1361:43077..48755- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002016-697863 ID=EMLSAT00000002016-697863|Name=EMLSAT00000002016|organism=Lepeophtheirus salmonis|type=mRNA|length=5679bp|location=Sequence derived from alignment at LSalAtl2s1361:43077..48755- (Lepeophtheirus salmonis)
ATGTCTGAGGAAGAGCCACCCATTGATGAATCCCTGACACTATGTTTGAG
CCAAATACAACGATTTTATTATTACTCTATTCTCCTCAAAGAGGAGACGG
AGAAAAAGTACTCCAATTGTGTCCTGGAGTTTACTCAAATATCCACCAAT
ACCCTTTTTTGCTATATTGTCACAATGATACAAGTATATCTCATGATCAG
CAACTCCTCCAAGAACTCTGCTCGAAGTGCAAACGGCTCCGGAGGAATCT
GTTTTGGTCTTGAAGGAATCAACAACGGCCCAATTCATGCTCGCTATGTA
TCCCATCATTTTATTTCTGCCATTTATATTTTTCAGTTCATTGTGGCTCT
CTTTTCCGCAGTGGAAGTTGTTTGTTTCTGGTCGAAAACAAATATTTTTA
TGGCGGMCTCATTTGTTGACTCATTTTTATTCATTGTGTCTATCATAGCA
AGTGGAGCTTATTTTGTATCCGTTGAGAAAAGGCATCTTCGCTATTCTAT
TCCTTTATTTTTGCATTATGGCGCAAATACCTTGATCCAAGGGTTCTGCC
TACTTGAAAATAGTGATTTTCGATACATTCGTACTTGGTGTGCCTTCCTT
CTCTCAACGTCTTATGGACTTCAGTTCATCTTTGGGTTCATTGGAATCAT
ACAAAGACTATACTTGAGATTAGTTTCAAACATGGACGGACCAGTCTACT
CGAAAAGACCAGTTATTCCCCAAAGCCACGTCTATTTATATAATGAAGCT
TCTTCATTCAGTAGGCTCACTTTTTGGTGGCTTAATCCCATACTTACCCA
AGGATATAGAGCTCCGCTTGAGATTGATGACCTTCACAAATTACCCAAGG
AAGAGCGAACCAAAAAGTATTTTCAAAAGTTAAAAACTCTATTGAGCAGA
GATAAATCCTCTATTTTGTGGGAATGTATTACAATGAATTGGTCATTTGT
TATCCTTGGAGGATTATTTCGTCTATTTGCAGATATTTTGGGATATGCCT
GTGCTCTAAGCATAAATATCATAGTCAATTCAATTGCTGCAGAGAATGAA
AATGCAAGTCTACATTTAATCAGCAATGTCACAATCAACCCTTTAAAAGA
TACTCGATATTATGATTCCTTTTTTGTCTCTGAGCTATTTTTTGATCCAC
GCGTAGTGTCCATTGTTATATTCCTTGCTGCTCTGGGCCAAGGTGCCCTT
TCACAGACTTCAAATCACCTTTTAACAGTTTCAGGGATTAGGGCAAAGAA
TGCTCTTCATGTGCTTTTATATGAAAAATCTCTTAAACTCCCTGTTGGCT
CCTCCAATCCCATGCAAATCCATCGTAAAATAAATTTGAAACCTCTCAAT
GATGAAGGTAAGGGCTGCATGGGTGGTAGTTGCTCTCTGGATGAGGACTA
CAGCAACGAGGGAAATATTGACATTGGCTTCATTACAAATTTAGCATCAG
AGGATATCATTAATATTAGAGAGCTTATTTGGAATGTTCATTATATTTGG
GCATTGCCTCTCAAGATACTTGTTCTTCTTTTCCTACTATATGATCAGTT
AGGTATATCCGGAGTTAGTGGAGCTATACTGGGAACATGCGTTATTTTAC
CACTCCAAGTTCTCACTGGAAAACTCATGTCAGAGAATAATAAGCTTATA
CTTTGCAGCCAAGACAATAGACTATTCAAGTCAACTGAAACTCTGGCTTC
AATGAAAACGGTTAAACTAGCTACGATGGAGGAATGGGCTTTGAAACGTA
TTCGTTGTGCTAGAACAAAGGAACTAATTTTTTTGAGAAGAGATTCCTTT
CTATGGTCATTTATGGCATTTCTTGCGTCCATTTCAACCACACTCGTCAC
GACTCTCACCCTAGGACTCTTTGTTCTATTAGAGGACCATAACTTCACGG
CAGCAGACCTCTTTACATCTATGGCTCTATTGAGTCAATTAACCGTATGC
CTCTCGGTAGTACCAGTTACAGTTCCAATATTTATTAAGGGAAAAGTCTC
AACTCAGAGACTCGCCGAGTTTTTGAACCGAGCTGAGGTTTCTATCTACA
AGCAAAATAACAAATTGAATAAACATTGTACATATTTTGATGACCGGAAG
GATGATGATGAAGAAGAGGAAGAGGAAGAAGAAGAGAGTGAGATCTTTAT
CCAGAGAGCGAAAAGGCTTCCAGAAACATGTTTCACAGTTGAAAATGGAA
CATTTGCATGGCCCAAATGTGAAACAAATGTTTTGCAATCCATTAATCTT
GAGATAAAGACGGGTTCCTTAACTATTGTCATAGGACCGTCCGGCTCTGG
GAAGACAGCACTAATATCCTCCCTTATTGAAGAAATGGATAGAATCACTG
GTTCTGTAAAGTGGAATGTTCCAGACACTGTTGCTCTTCTTGGACAAAGA
CCTTGGCTTTTGAACACGACCATAAAGGATAACATTTTATTGGGGAGACC
TTTCAAAGAAAAAAGATACAAAAAGGTCATTGCTGCCTGTGATCTTCAAA
CTGATATTGATTTACTTCCTCATGGTGATGATACAGAGATAGGTGAAAGA
GGTGTTCTTCTCTCTGGTGGACAACGGCAGAGACTGGCCATAGCAAGATG
TCTATATTCTAAATCTTACTGTACATTTATGGATGCTCCTTTCAGCTCCC
TTGATTCTAAAATAACATCTCATGTCTTCGAAGAAGGAGTCTTGAAAATT
CTACTCAAAAGACGTAGAACTGTATTTTTAACGACAGAAAGACTAGATTT
TCTTCATCGAGCAGATCATATTGTTGCTCTAAAGGATGGAATGATAAAGG
CTCAAGGAACTATTCAAGATGTCACTCGTTTATGTCCAGAGCTTTTGAGT
ACAAAGTTGTCGAAAAATAGACTATCTCGAATTAGTGATGACAATAAGGG
TCTTGTTGAAGGGAAAACAGCTCAGGAGAGATGGAAATTACTTCGCAATG
TCACAAAACTAGGGATCAAGGTAAAGAACAAAAACACACCTAAAAAAAAG
AGTCAACTGCAATTGAATAAATCCGATGACAATTTCCCTCTTGAAATATC
TCCAGTCAATAGTCTTCTCATACGAAGACATCGATCTCATTCCGGTGGTA
CATCATCCGGATCAAGTGGAGGTTCCTTCCTTTTTGGAAAGTCATTGTCT
CAACTKCCTTCCTCAGCTTCTTCGTGTAAACTCTATAGAAGCCATTTACG
AATTGATAGTCGATCTCAATCCAATCMAACTCACGATCTATTACTCCCAT
CTGATGAATACATCGACTATTCTTTAACAGAGGAAGAGCCCTCATTTTGT
AGAGTAAAGAAATTATCAAAAATAAATAATGGAAATAATTTATTTGCTCG
TACTTTATCATGGAATACCAACTCAAACGAACTCTCAGTATCTACCTCTT
CATCTATGAATCGATCTGTAGTTCGGAGAGCTAAAACACCTCCAAATCGT
CCATCCAATCATGCTGGAGAATTTCAAAGAATGAGAAGCTTCATTGTGAA
TACTAATAAAAATATTAATTTGACTAGCAATCGTAATGCTGGAGGAAGGT
CCTCGTTGCATCGGGACTCTATGGTGTTAAGCAATTTGATGCCTATGCAC
AGTAATTCGGAACCTGAAGGATTTATTACTGATACAGTGGCACCTCTTAA
AAGGAGAAGTATAGTCCTCGAGCCCCCACATAATCGAGTCATGAGACTTA
CCTCCAATTCTTCCCAAATTTCATCCATTTCAGGATTTTCAGATGACTTC
TTCGATGAGGAAGAGGATGAGGAGGGTCTGGTGTACAAGTCACAGGGGGG
TCAGTCCCATGAAAACAGAGAATATGGATCAATTGATATTGGTGTTCTTA
CCGTTTACTTCAAAGCAGGAGGGATTTTTTTGGCAGGATTTTTTGTGATT
TTGTCTTTTGTTCTGCAGTCAGTTAAAGTGTACATGGATTTCCTTCTCAG
AGATTGGTCCATGGAAGAAAAAAATTCTGACAAGCTCATTGCCTACTTTT
CCTTCTATGGCTCTCTCTCCGTGATTGTTATTCTCATATCTTGCGTTGCT
AACCTGATTGGTCAGCTAATAGGAGCACGAGCACGAACAAAGTTGCATAA
TGATATGATACAAAACATTATGTACTGCCCTCTTGAGCTGTTTGAGGCTT
TTCCCATTGGAAGGATCATTAATCGTATTTCTCATGATATTTTCATAGTG
GATCAAAAAATCCCTCCCTGCATTCAAAGATTGATTATGCTGAGTTTTGT
ATGCATCGCTGCACTGGCTGMCAATTCTATTCAAAGCCCTGTGTTTCTTA
TATTTGCCTTGCCCATGATATCCATCTATTGGTGGCTTRAGCACTTTTAT
AGACGCTCATCCAGAGAACTTCAAAGATTGGATAGTATTACTCGAGCACC
AGTTCTGTCCCACTTTTCAGACACACTAAGTGGGCTCATCACTGTTAGGG
CCTTTGGTGAACAAACCCGTTTTATCAACGAACTATGCGAAAAAGTTGAT
ACGAATACTTCAGCGTTTCTCATACTTCAAAGTGGTTGTAGATGGCTAGG
AGTTTATTTGGATGCAGCTGGAGCAATTTTCGTGTTTCTCTCCATTCTTG
TAAACCTATTCTTTCCACGCAAGGGAAGAGAAGTAACTTCATCTGCCTCA
ATTGGATTGAGTGTCAATTATAGTCTCCTAGTTCCAATTTATTTAGCTTG
GGTTGTGAAATTTGCTGCAAACATTGAGAATTACATGAATGCAGTAGAAA
GGGTTCTTGAGTACACACACTTTCCATCTGAGGAAGAAGACTTTTCCGAA
TTCCAGGCAGTTCATGCATCCTCAATGAATTCATCCAGACGAAGTTTCTT
ATTAAGAGGACGAGGAAAACATGACGAAATTGAAGAGGATGTTCGCGTTT
CTGGAGACTTTTTACAAAATGACTCAGAGGGGTTGATCATACGGTTTAAT
TCAGTGTGTCTAGCTCCATCATTTGAATATAGAAGACTACCTGGGATACA
GCAGGGTTTTTCTTTAGAGATACCCTATCGTCAAAAGGTTGGGATATGTG
GACGTTCTGGAAGTGGGAAATCTACACTTCTCATGGGAATTGTTCGTCTC
TCTCGGGTTTTGCAAGGTTCGATCACGATAAATGGTATTAACATTAATGC
CATACCCCTCTCAAGGCTTCGAAAATTTGTAATCACGATCCCTCAGGATG
CTGTTCTCTTTTCAGGAACAATTCGAAGCAATCTTGATCCTGAAAATGAC
TTCTCCGATGAGTTAATATGGTCTACTCTTGATAAGGCGGACTGTGGTAA
AACCGTGCGAAACTTTCCAGACGGACTCGATACATGTGTCACAGAAAATG
GCGACAACTTTAGTTTGGGTCAGCGTCAAGAGTTGAACATTGTTAAAGCA
CTTCTAAGACGACCAAGGGTTGTCATACTGGATGAATCCACCTCAGCTTT
AGATCCCAATAGAGAAGTAGCGCTTCATAATACCCTCTTAGAAGCATTTG
AGGACTCTACATTGATCTCTGTTGCTCATCGCCTCTCTAATATCGTAGAA
TATGAACGAGTCTTAGTCATGGGTGAGGGTAGAATATTGGAGGATGGAAA
TCCTAAAGAACTTTTAAAAAAACCCATGGGGTTTTTCTCAGCACTCTGGA
GAGCTGCTGGAGAAAAACCTCTTTCTTGA back to top
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