EMLSAT00000002030, EMLSAT00000002030-697877 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002030
Unique NameEMLSAT00000002030-697877
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s136supercontigLSalAtl2s136:1233167..1233839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002030 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002030EMLSAG00000002030-684796Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008959EMLSAE00000008959-717887Lepeophtheirus salmonisexon
EMLSAE00000008960EMLSAE00000008960-717888Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780546auto780546Lepeophtheirus salmonispolypeptide
EMLSAP00000002030EMLSAP00000002030Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002030

>EMLSAP00000002030 ID=EMLSAP00000002030|Name=EMLSAP00000002030|organism=Lepeophtheirus salmonis|type=polypeptide|length=206bp
MVKAKFRLGIFFICVLSTASLILIYYQMSAMQNEKEDNKVTENRLRKWNE
PFSWVSSLDDSETSSSPIPHRLTCRHTIQGSSAIADDKGYLCPRKSVLQS
GCCDTNATESYQYSCTHCHLDMGCCQAYEDCVSCCMSPDKKTFLMSVLNE
ARILSNILILSVSDQYELCLAKCRTSSKSVHHENTYKNPEYKFCYKRIQD
IKNPKG
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mRNA from alignment at LSalAtl2s136:1233167..1233839-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002030-697877 ID=EMLSAT00000002030-697877|Name=EMLSAT00000002030|organism=Lepeophtheirus salmonis|type=mRNA|length=673bp|location=Sequence derived from alignment at LSalAtl2s136:1233167..1233839- (Lepeophtheirus salmonis)
ATGGTTAAAGCCAAATTTAGACTTGGAATATTCTTCATATGCGTATTATC
TACTGCATCTTTAATCTTAATTTATTACCAGGTATTCAATTAATTATAAT
TAATATGATTAATAAATCTGTTGATTTGTATAGATGTCTGCAATGCAGAA
TGAAAAGGAAGATAATAAAGTGACCGAAAATCGTCTTCGTAAATGGAATG
AACCCTTTTCATGGGTCTCATCATTAGATGACTCAGAAACATCCTCATCT
CCAATTCCGCATCGATTGACTTGTCGTCATACTATACAAGGATCATCTGC
AATAGCTGATGATAAGGGATATCTTTGCCCTCGAAAATCCGTTCTCCAAA
GTGGTTGCTGTGATACAAACGCGACAGAATCATATCAGTATTCCTGTACT
CATTGCCATTTAGACATGGGTTGCTGTCAAGCCTATGAGGACTGCGTTTC
CTGTTGCATGAGTCCTGATAAAAAGACTTTTTTGATGTCTGTCCTTAATG
AAGCAAGAATTCTTAGTAATATTCTAATACTGAGTGTTTCGGATCAGTAT
GAGCTTTGTTTAGCTAAATGTCGAACGAGTTCAAAGTCTGTTCATCATGA
AAACACTTATAAGAACCCAGAATATAAATTTTGTTACAAAAGGATTCAAG
ACATAAAAAATCCTAAAGGTTAA
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