EMLSAT00000002031, EMLSAT00000002031-697878 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002031
Unique NameEMLSAT00000002031-697878
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s136supercontigLSalAtl2s136:1234006..1236103 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002031 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002031EMLSAG00000002031-684797Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000008961EMLSAE00000008961-717889Lepeophtheirus salmonisexon
EMLSAE00000008962EMLSAE00000008962-717890Lepeophtheirus salmonisexon
EMLSAE00000008963EMLSAE00000008963-717891Lepeophtheirus salmonisexon
EMLSAE00000008964EMLSAE00000008964-717892Lepeophtheirus salmonisexon
EMLSAE00000008965EMLSAE00000008965-717893Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780548auto780548Lepeophtheirus salmonispolypeptide
EMLSAP00000002031EMLSAP00000002031Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002031

>EMLSAP00000002031 ID=EMLSAP00000002031|Name=EMLSAP00000002031|organism=Lepeophtheirus salmonis|type=polypeptide|length=178bp
MNMIKNQLNKYRYFLKSVATYSVLYPSANFVQQKYFRKTGEVDLAETKRF
WIYGTFASAPLVYGWQXILNAYFPLVTRPYVILKVCLDQFVFAPVVIFLF
YVGINALESKSAAEIKEELIEKYRMTYMSGMFYWSFVQAFNFRFVEFRYR
TIYTSVMSFFWTIGLSYMKSLSLKVQPT
back to top

mRNA from alignment at LSalAtl2s136:1234006..1236103+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002031-697878 ID=EMLSAT00000002031-697878|Name=EMLSAT00000002031|organism=Lepeophtheirus salmonis|type=mRNA|length=2098bp|location=Sequence derived from alignment at LSalAtl2s136:1234006..1236103+ (Lepeophtheirus salmonis)
TGTATCTCGCAACCTCTCATTTGAACATAATATAAATAAAAAAGCATGCA GGGTACAAAATCAGTTGATAAGTTATAGACAACTTTAGAGCTATTCTACA TTTTATATACCACCAACATTCATAGCTTAACTAAAGCTAATTGAGTTCAA CCAATCAACGTTCGGAACACTAATAAGGCGAAGAGTAGAAATGAGTTGAA AAATCGTCAGCTAATAAATATACTATGTACATTTTTATGTTAATAATAAT GGAATAACACTGTTAGAAATTTTTTATATTATTTAATTGTTTTGTCATTT GTACAACCGAGCGCTATGTAAGTATAAATAAGATCTTATCTTCTGATCGC TCGATCATCAGGACCTAACTCATTGTAATGGAAACTTGAACTGTTTAATT ATTTATGGACTTTGATAAAATTATTAATATTAATCATTATATACATACGG ATTTTCATGTAACACAGGTAATATTTTGTATTAGATATAAAAGACGGATG GGTCAATAATATAATATTAATACGTTATGTAAATTGTAAAGACTACATAA TAAACGAATACATATTTTTTTGTTCTAGGTATTTAATATAAAACCTGGTT TTTCTGTGATAGTTGATCGATAGTTATTTTCATAGACGCATCCAAAAAAG TAAGTGACTTAGACGATTATATTGTCTGTACTGTGGATTTTTTATAATAT TTTCTTGCAGTATTTATAGCCACAAATGAATATGATTAAAAATCAGCTCA ATAAGTACAGATACTTTTTGAAAAGTGTTGCCACTTACTCCGTACTCTAC CCTTCTGCCAATTTCGTTCAACAAAAGTACTTCAGAAAAACTGGCGAGGT TGATCTCGCTGAAACGAAGAGATTCTGGATTTATGGTACTTTTGCTTCAG CTCCATTAGTATATGGATGGCAGAGNATTTTAAATGCTTATTTTCCTCTA GTCACTAGGCCATACGTTATATTGAAAGTGAGATCATCGCTTTAATTCAA CATTTTGGTTTAATTAGTTTGTATTTATTTAATTAGGTCTGTCTTGATCA ATTCGTATTTGCTCCTGTCGTTATTTTTTTGTTTTATGTGGGCATAAATG CCTTAGAAAGTAAAAGTGCTGCCGAAATTAAGGAGGAGCTCATTGAAAAG TATCGTATGACTTATATGGTAATTATAATTTGCTTACTTTTAATCTTTAT ATTTTTGTATTTATATTTTATTTTTTTCAGTCTGGAATGTTCTACTGGTC GTTTGTTCAAGCATTCAATTTTAGATTCGTAGAATTCAGATATAGGACAA TTTATACCTCAGTAATGAGCTTTTTTTGGACTATAGGTCTCTCATACATG AAATCTCTGTCTTTGAAGGTTCAACCAACGTAGCATCGTTTCACGCAATT TTAAATTGTCTTCCAGTTTTCTTATTTGATGGATTCTTTCAAATAAGCTC GAGCTAACGTTCATTTTCCTAAATATGCATGTTATGAGATTAATTGGAAC TTCCAGAAACAATATCTACTTCATTTTTTCAAATATTATTTTACAATGTG CTAATACAAAACACATTTTTTAATAATTGAAAATTGTAAATCTTATTAAA GGGATTTGTAGGAATTCCACATTTTATTAATTTAATATTTTTATAATTAA GGAATTAATAGGTCTAATAATTAATTATATCTCATTAATTTTATATATTA ATTATCTCCTCTTGAACTTGTAGCTAAGCCAATTTTCTTATTTTCAACGT CATACACGCTATAAAATGCACTTAAGAAATTAGATCCAAGATACCATTGT GGTTTTTTTTCTTTTGCAAGGCCTACAAATCCGGAGAGGCAAACTTTCAT ACCAAGAATTCTTGTCTACAGGGTAACATAATTTAAATAAAGAATATGAA GAGACATAAAATTATTTACTTCAATAATGTAGTCTTGTGGTTTTAATTTA AAAATTTGGTCATCAAAAACGAATTCAATGGTMGGAAGACTAAGAATTGC GTTACAATATACTTTATAATATCCATATGTAGGGGCCATTTGCGTTGCTN CCGAGCCATTTATTAATTATTTTAGTTTCCCAATATGGTCCATAAATG
back to top
Add to Basket