EMLSAT00000002131, EMLSAT00000002131-697978 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002131
Unique NameEMLSAT00000002131-697978
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s139supercontigLSalAtl2s139:1331129..1333497 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002131 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002131EMLSAG00000002131-684897Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009422EMLSAE00000009422-718350Lepeophtheirus salmonisexon
EMLSAE00000009423EMLSAE00000009423-718351Lepeophtheirus salmonisexon
EMLSAE00000009424EMLSAE00000009424-718352Lepeophtheirus salmonisexon
EMLSAE00000009425EMLSAE00000009425-718353Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780656auto780656Lepeophtheirus salmonispolypeptide
EMLSAP00000002131EMLSAP00000002131Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002131

>EMLSAP00000002131 ID=EMLSAP00000002131|Name=EMLSAP00000002131|organism=Lepeophtheirus salmonis|type=polypeptide|length=620bp
MPKRAATSPPSLRGCLYKSHFSEKDFISKDPKEMAKIYQKTLDKLKKGLE
KDCRKCFDMVRLVTRGEFSLPKEVQYVCLHTPDAVDVRLRCKDHKAADGL
GAHQLLLAXXSPNFLKNIFLSNQDDMICVHLPNYNAEDVSAVVSLLYYGE
LIFYDIVTLDICQQIMRDLGICVSVTYDYEDNLYKLINSIPLSEKSSINF
STVRVVKHEMETTHECDRCSFVTTDYNAFTHHVNFCPCMTSEFKVETNPM
TDNEALINLNENNSSYVLKAFHCSYPSCQFSTDSLSDYQVHIIVHNRKET
LRSCPVCFIPTSSPSKLRQHFLALHSNIKSCTECKWRPTEDNDFESLLNH
IQTHRSGTSLSLHCEYCDYSCTSSSHLSRHLKVHNNEKEFTCSDCPAKFR
VRHQLNLHQNSIHLKKRLHNCHSCSKSYSTSKQLKSHFRTKSCEFFQCKM
CNKHFKKSQSLAGHVKSAHPEIRHPKTQICEACGKSFSKKSGLRNHKCGF
NDSSKVEEEKRCDICDKMVSISSYKSHTQYHLSGKKTCHHCKKVFANKSS
LERHKLIHFNIKSFQCDTCLKEFSQNSALLTHKRVHTGERSTCSNCGKRF
ISKSLLNHHYRVTKCSKTDD
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mRNA from alignment at LSalAtl2s139:1331129..1333497-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002131-697978 ID=EMLSAT00000002131-697978|Name=EMLSAT00000002131|organism=Lepeophtheirus salmonis|type=mRNA|length=2369bp|location=Sequence derived from alignment at LSalAtl2s139:1331129..1333497- (Lepeophtheirus salmonis)
ATGCCAAAACGTGCAGCAACATCTCCTCCAAGTTTGAGAGGATGTCTCTA
CAAATCGCACTTTTCCGAAAAAGACTTCATCTCCAAGGATCCTAAAGAAA
TGGCCAAGATCTATCAAAAGACTCTAGATAAGCTGAAAAAAGGGCTCGAA
AAAGATTGTAGAAAATGCTTGTGTGTCATGTTGCTTAGGGAAAAAGGGGG
ATACCAAAGTATGCTCTTCATGCAAGGGCCCAACTTGCTCCAGTTGTTTG
GCCATTTGTGGAATGTGTGATATCAGGGATATCTGTGGGAATTGCTCCAT
TTCGACTCACCAAACCCTCTGTTTGGGCTGCTATAATAGTTTATAATTAC
ATGAAAAATAACTAAATTATTTAATTTATATATGTATTTAAATGTTCCTT
AATCGATACACTATTATTTTATTCATAAAATATGACTGCATCCAAGTACT
TAACTTAACGACTCTAATGTGATCCCAATACATTTTCTAAATATTTCTAT
TTCAGTGATATGGTACGTTTGGTTACTCGGGGAGAATTTAGTTTACCTAA
GGAGGTTCAATATGTTTGTCTCCATACACCTGATGCTGTTGACGTTCGAC
TCAGGTGTAAGGATCATAAAGCTGCAGATGGTCTTGGGGCACATCAACTT
TTACTGGCTTYTKCCAGTCCCAATTTTCTTAAAAACATCTTCCTTTCTAA
CCAAGATGATATGATTTGTGTTCATCTTCCTAACTACAATGCAGAAGACG
TATCCGCTGTTGTATCTCTTCTTTACTATGGAGAGCTCATTTTTTATGAT
ATTGTAACGCTTGACATTTGTCAGCAGATCATGCGTGACCTGGGTATTTG
TGTTTCAGTCACTTATGATTATGAAGATAATTTGTATAAACTTATAAATT
CGATTCCCTTATCGGAGAAATCGTCTATAAACTTTAGTACAGTTAGAGTC
GTAAAACATGAAATGGAAACAACTCATGAATGTGATCGTTGTAGCTTTGT
AACGACCGGTAACGAAATTAATTCTTTAATTACATTATTTTTCATCTGTT
TGTTTTTTAGATTATAATGCATTCACACATCATGTCAATTTTTGCCCTTG
CATGACATCTGAGTTCAAGGTTGAAACCAATCCTATGACTGATAATGAAG
CTTTAATTAATTTGAATGAAAATAACTCCAGCTATGTACTTAAAGCATTT
CATTGCTCTTATCCTAGCTGTCAATTTTCTACCGACAGTCTTAGTGACTA
TCAGGTTCACATTATCGTCCATAATCGAAAAGAAACACTGAGAAGTTGCC
CAGTTTGTTTTATACCAACAAGTTCCCCTTCTAAACTTCGACAACACTTT
CTTGCTCTCCACTCGAACATTAAAAGTTGTACTGAATGTAAATGGAGACC
CACTGAGGACAATGATTTTGAGTCCTTATTAAATCATATTCAAACACATC
GTTCTGGTACTTCCTTGAGTCTACACTGTGAATATTGTGATTATTCCTGC
ACATCCTCTTCGCATCTTTCAAGACATTTAAAAGTTCATAATAATGAGAA
AGAGTTTACATGTTCCGATTGTCCTGCTAAATTTAGAGTTCGTCATCAGC
TTAACCTTCATCAAAACTCAATTCATTTAAAGAGTAACATTTTAAACCTT
GTAGTCCATGTATTTCTTTGTTTCAAATTAATCAAATTGTCTGTTTTTCA
AAATATGTAATTGATTGTATCAAGTTTTAAAATGTTATTCCTTAACCCTA
AGAGCGATTACACAACTGTCATTCCTGTTCAAAGTCTTATTCAACGAGTA
AACAACTAAAAAGTCATTTTAGAACTAAATCTTGTGAGTTCTTTCAATGT
AAAATGTGCAATAAGCACTTCAAAAAAAGTCAAAGCTTGGCGGGKCACGT
CAAATCTGCACATCCAGAAATCCGTCATCCCAAAACTCAAATTTGTGAAG
CTTGCGGGAAAAGCTTCAGTAAAAAATCTGGACTAAGGAATCATAAGTGT
GGATTCAATGATAGTTCTAAAGTAGAAGAGGAAAAACGCTGTGATATTTG
TGATAAGATGGTTTCAATCAGTTCCTACAAGTCTCATACTCAATACCACT
TAAGTGGTAAGAAAACTTGCCATCACTGTAAAAAAGTGTTTGCAAACAAA
TCATCACTAGAGAGACATAAACTCATTCACTTTAATATCAAATCCTTTCA
GTGTGATACTTGTCTTAAGGAATTTAGTCAAAACAGTGCATTGCTCACCC
ATAAAAGAGTTCATACTGGCGAAAGAAGCACGTGTTCTAATTGTGGAAAG
CGATTTATTTCAAAAAGCTTACTTAATCATCACTATCGAGTCACGAAGTG
CTCGAAAACTGATGACTAA
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