EMLSAT00000002138, EMLSAT00000002138-697985 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000002138
Unique Name	EMLSAT00000002138-697985
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s139	supercontig	LSalAtl2s139:1370052..1374606 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000002138 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000002138	EMLSAG00000002138-684904	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000009457	EMLSAE00000009457-718385	Lepeophtheirus salmonis	exon
EMLSAE00000009458	EMLSAE00000009458-718386	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780701	auto780701	Lepeophtheirus salmonis	polypeptide
EMLSAP00000002138	EMLSAP00000002138	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s139:1370052..1374606+

protein sequence of EMLSAP00000002138

>EMLSAP00000002138 ID=EMLSAP00000002138|Name=EMLSAP00000002138|organism=Lepeophtheirus salmonis|type=polypeptide|length=60bp
MPKESAIYPGVIPYRTDSPSSKVVFVDKKMDTSSTSGDEIKKNLINGHRG
SVVRTVHATV

mRNA from alignment at LSalAtl2s139:1370052..1374606+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000002138-697985 ID=EMLSAT00000002138-697985|Name=EMLSAT00000002138|organism=Lepeophtheirus salmonis|type=mRNA|length=4555bp|location=Sequence derived from alignment at LSalAtl2s139:1370052..1374606+ (Lepeophtheirus salmonis)
ATGCCTAAGGAAAGTGCGATATATCCTGGCGTGATTCCGTATCGAACGGA
TAGTCCTAGTTCTAAAGTCGTTTTTGTTGATAAAAAGATGGATACTTCCT
CCACTTCTGGGGATGAGATAAAGAAAAATTTGATTAATGGACGTTACTCC
GAAGATGAGATACAAGAGCAATACTTTAATTACTGGCAAAATTTGGTAAG
CCTTTAAAGTTATAATAGTAAAAACACACATATCATACAAAACACAAATT
TAAAAGTGTGAAACCATACTAATTGTACATATGAGGGTCGTTCAAAAAGT
CCGTCTAAAGTCCAAGAGATGGCACTTCTGGGACGTATCGAGGTCATGTT
TAGTTAGTAGCATCTCTTGGAAGAACACATAGCAACTTTGAGCCAGATCA
TCCTATTTCTTTCTGTTTGGTATTCGTTTGAATCCAAGAAGTGGAGTGAT
TTTCACAAAATGGACAAAAAAGAATTTCGTTTGTTCATTAAATATTACTT
TATGAAAGGCAAAACGCCTGAGGAGACTACAAAGAAGCTTGATAAACATT
ATGGGGACTCTGCACCTTCAATTAGAACAGTTTATAAGTGGTTTCAAAAT
TTTCGGAGTATCCATATGGGCACAAGTGACGCAGAATGTTCTGGACGCCC
AGTTGAGGTTACTACTCCAGAAAACGACTATCTGAAAATGTTAAAACTAT
TATAAGTGCATACTACTCATCGTTATTGAACCATTTGAAAACTGAGCTGC
AAGAAAACCCACAAAATTGGCTCATCAAAAAGTCAAAATTGATAGAAACA
AGATTCCAACTCGATTCACATCCCCCTTTTGTCCAGACTTGGCTCCCTCG
GACTGCTATTTCTTCCTCAATTTGAAAAGATATGGCTGGGGAAAAAATAT
TTTATTCCAACGAGGATGTGATTGCACAAACGATTACCTATTTTTCAGAC
TAGGAGAAATCCTATTATTCGGAAGGGATCAACAAACTAGAGCGGCGTGT
GACAAAGTGAATAAGCCTAAAAGGAGACTATGTAGAAAAATAAAAAAAGG
TTTACCTCAAACAATTAAGTAGGTTTTATTTTTGCACGTACTTTTCAAAC
GACCCTCTTATATAAATAATAATTTGTTCAATTTTTTGCTTTATTTTTGC
CTTGAGCAGATTACCAAATAGTATTGTTTCTCAATAGAATATCTACATAA
ATATATAAAATGAGAAAAAAAATAATTTTAATATCATGAATTCTTAATTA
TGTTGTACATGTATTTTAAAGATAAAAGAGATGTACATACTATATACTTA
GAACCATGTAAAAATTACAAATCATATGTTTATTTTGAAGGATTTCTGTT
ACTTATTACAAGAGTATTACAAAATCCAGTGTATCTGGATTCTGTAATTG
CTGGGTGTATATTTCATTGAGATAAAATAAATAGAGTGAGCAAGGGAAAT
TTTCTGAAGCAGAAAGTTAGTTGACCAAAAGACTGGGAAATATAGTTTTT
TATACATTAATTACTATATGACTGTTTTATCTACAAGAATAGCCACTGGG
GCGCCCTCAATTTAGTAAACACCTGAGAGTACCTCAAATTTTATACACTA
AGAGGAATTCGGAGTTATGTCGAAAAATTCAAATTACTCCGTGCCATCAT
TTTCTTGTGATTTAAACTTTCCTTTCAAGTTAAATTTTTCAGATTTCATA
ATGTTTTCGTTGAAAACCGATTGAGTTTTGCAGCACTGTTCATCTTCAGT
AAAGTCGTGCCTAACGTTGAACAGTTCCTATAGATATTTTATGGAATGAT
CCACTACTTTGATTAACCCTGAATAATTTAATAAAGATCGAATATGAAAA
TATTTGAAGCGCCCTCTATGTTGTTGCTATATCTATTTAATACTACTAGA
GTTTAAGTGTTTTGGTCAACTACGACGGTATCAATTTTTTCTTGTATATT
ATGTAAATATGTAGTGATGGAACGGTTCAAAAAAATAAAAAAATCCCAGA
GCTGATTCTCACGCGATTCTAGTTAAAATTTGCGATGCATATTCCAAATC
TTTAATATTTTAAAAATTAGGTAAAAAATACCATTTTGCTATAAATATCT
CAAACTTACAATTGTTATATTAAATCACCTTCCTTTACCCGGCTAGCTTT
TTCTGAGACGAATTTTCCCAGGGTGAGTAATCCCACAACATACTTTCCAA
AGTATAATTTTTTTTTAAAGTTGAGCTTTCCTAGATCCCTATACACAAAT
TATTCGCCTAAAATATCAATACCTGCAACCACTGTATTTGCTTTGAACCC
TTTTTTGTTCGCGTTCAGTTTGTGTTTAATTTGRTTCTTCTACCTTTTCG
AGCATTTTTTATCATAAATTATTTTATTACAATATTTATAAAATTATAAG
ACTCAAGTCACAAATCACATGATCGGTTTTTATATCTTATCGGATATATT
TAATATTTTTTTCCTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACTCTGAGGTATCAC
ATAATTAGGCTGGAAATTCGATCAAGTCGACCCTTTCCCAGGCCACACAT
TGAATTTTACATACATTTTCAAATATATATACACAAAATNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGAAACACAATGTGAAATAATTAAGTTTCATGTTTTTCAGTCCAGT
TTTTATAGTCGTCAAATCTAATAAAAATTAAGGACCGTCCGTAGGGCGTA
AAGGGTCCGAAAGGGTTGTATTCCCCAAAATAAGGTTTTTTGCTTTTTAA
TTGTAATTTTTTTCGTCATTCAGGCAAATTATGCAGAAGAGAAAAAAATT
TAATATTTGAAATTTTTGTGAATAGCTATAAATTTGTAATTTTTTTTCTT
CCAAGAAATATAATTTTCTGTAAAGTGGTATGGATTTTTGAATTTTTTTT
CCAAATAAATTAATTTTTCAAATTTTTTCCCCAAAAATTTAATTTTTCAA
ATTTTTTTCCTAAAAATTTAATTTTCTGTAAATTAATATGGATTTTTCAA
ATTTTTTCAAAATAATTGAATATTTGAAATTTCCTTTTTGAAATTTTTTT
CCAAAAAAATCCAAAAATCATACCTCCACCCACAAAAAAATATAACCCTG
CGGACGACCCTGAAAAGGTTATGTATGTGCAAATACCCCCNNNNNNNNAT
ACGGTACATACAATAGCATGATGTACTTGTATGTTAGGAAAGTACTTTTC
CTTATGTAATTAGTTAAGAATCCGTAGGTTTAAAACGGAATTACATACTT
TACCAACGAATAAAATAAAATGAATTGCTCCTTGTGAAATAAAGAAGAAA
AAACAAGGAAGCAATGAAATTACATCACATATTCTATACTTTAATATATA
ATAAACATATTCAGACAGGGGCAGTGTGGTACGGACGGTTCACGCTACAG
TATAG

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