EMLSAT00000002140, EMLSAT00000002140-697987 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002140
Unique NameEMLSAT00000002140-697987
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s139supercontigLSalAtl2s139:1420806..1421852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002140 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002140EMLSAG00000002140-684906Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009466EMLSAE00000009466-718394Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780736auto780736Lepeophtheirus salmonispolypeptide
EMLSAP00000002140EMLSAP00000002140Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002140

>EMLSAP00000002140 ID=EMLSAP00000002140|Name=EMLSAP00000002140|organism=Lepeophtheirus salmonis|type=polypeptide|length=348bp
MESNKEDAFKCVKIAETAMLQGDAEKAERFLKKAIRLYPLPRAQELLDLI
VIKKTGSKIPSKSKMESPVHTESSPIDYTPEQVEAVRKILSCKDYYKILG
LSRDVDGSDIKKAYRKLALQFHPDKNKAPRAAEAFKAIGNAFNTLSSPED
RKYYDHVGSRPTTNTTTQSSNIFEGQGRVFEFDMSHDEMFTRLFGGRGFY
RGSYPFQGHQTRTPXPEPREANGYTVFMQFIPLIIIGVSLFSSLLVSDPM
YSLQSSNKYNVKRVTSNLRINYFVKENFHQEFSGSLWQFEASIEEDYIKV
LRNSCFKEKNHKESLLWQXRYSGNSALLTRAHKYNTPSCDQLEKIYGF
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mRNA from alignment at LSalAtl2s139:1420806..1421852-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002140-697987 ID=EMLSAT00000002140-697987|Name=EMLSAT00000002140|organism=Lepeophtheirus salmonis|type=mRNA|length=1047bp|location=Sequence derived from alignment at LSalAtl2s139:1420806..1421852- (Lepeophtheirus salmonis)
ATGGAGAGTAACAAAGAAGATGCGTTTAAATGTGTGAAGATTGCTGAGAC
AGCAATGCTTCAAGGAGACGCTGAGAAGGCGGAACGTTTTTTGAAGAAGG
CCATACGTTTGTATCCTCTTCCAAGAGCACAAGAGCTTTTGGATTTGATT
GTAATCAAAAAGACAGGATCCAAGATTCCATCCAAGAGTAAAATGGAGAG
CCCTGTCCATACTGAGAGTTCTCCCATTGACTACACACCTGAACAAGTTG
AGGCTGTTCGGAAAATCCTGTCCTGTAAGGACTACTACAAGATCCTTGGA
CTATCTCGAGATGTGGACGGATCGGATATCAAGAAAGCCTATCGCAAATT
GGCTCTACAGTTTCATCCTGATAAAAACAAGGCTCCGAGAGCCGCAGAGG
CTTTTAAAGCTATAGGGAATGCGTTTAACACTCTTTCTAGCCCAGAGGAT
CGAAAATATTATGATCATGTTGGAAGTCGGCCTACAACTAATACTACGAC
TCAGTCCAGCAACATATTTGAGGGACAAGGAAGAGTGTTTGAATTTGATA
TGTCCCATGATGAAATGTTTACTCGATTATTCGGGGGAAGAGGTTTTTAT
AGAGGATCTTACCCGTTCCAGGGTCATCAAACACGAACMCCTCMCCCTGA
ACCCCGTGAAGCCAATGGATACACTGTTTTCATGCAATTTATACCACTTA
TCATTATTGGAGTGTCATTGTTTAGTTCCCTCCTCGTTTCTGATCCTATG
TATAGTCTACAGTCAAGTAACAAATATAATGTCAAGAGAGTCACCTCTAA
TCTAAGAATCAACTACTTTGTCAAGGAAAATTTTCATCAGGAGTTCAGTG
GATCATTATGGCAGTTTGAGGCTTCTATTGAAGAAGATTATATCAAAGTC
CTTCGAAATAGTTGCTTTAAAGAGAAAAACCATAAGGAGAGTTTGTTATG
GCAGGSACGKTACTCAGGGAACAGTGCTCTCCTCACTCGAGCTCATAAAT
ATAATACTCCTTCATGTGATCAATTGGAAAAAATATATGGATTTTAA
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