EMLSAT00000002147, EMLSAT00000002147-697994 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002147
Unique NameEMLSAT00000002147-697994
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s139supercontigLSalAtl2s139:1478126..1479135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002147 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002147EMLSAG00000002147-684913Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009493EMLSAE00000009493-718421Lepeophtheirus salmonisexon
EMLSAE00000009494EMLSAE00000009494-718422Lepeophtheirus salmonisexon
EMLSAE00000009495EMLSAE00000009495-718423Lepeophtheirus salmonisexon
EMLSAE00000009496EMLSAE00000009496-718424Lepeophtheirus salmonisexon
EMLSAE00000009497EMLSAE00000009497-718425Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780778auto780778Lepeophtheirus salmonispolypeptide
EMLSAP00000002147EMLSAP00000002147Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002147

>EMLSAP00000002147 ID=EMLSAP00000002147|Name=EMLSAP00000002147|organism=Lepeophtheirus salmonis|type=polypeptide|length=243bp
SATSPPFRIYEPIAVDESVRTVASKVVDQLKSYFGVREECQLIIEEIYNA
KLHVSKESIYDLTMKLTVMGPGCEPETKTCSSVKIFIPQPQYCEDPSGIC
HNLTETYEIQCTPELVVDPAVPSINEDFEDVPNAHTDPILKEIGEEATKF
LYHKFDTTNACPIHLREVVRAKRQLISDSINYEIELQVETNGADFDCEYV
HKNCDNVKLHQPPLHLCPGKKFCLIPVKLNEINCVEINQIFFR
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mRNA from alignment at LSalAtl2s139:1478126..1479135-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002147-697994 ID=EMLSAT00000002147-697994|Name=EMLSAT00000002147|organism=Lepeophtheirus salmonis|type=mRNA|length=1010bp|location=Sequence derived from alignment at LSalAtl2s139:1478126..1479135- (Lepeophtheirus salmonis)
TCAGCAACATCACCTCCATTTCGTATTTATGAGCCGATTGCAGTTGATGA
AAGTGTGCGAACGGTTGCTTCTAAAGTTGTTGATCAATTAAAGTCATATT
TTGGTGTTAGAGAAGAGTGTCAATTAATTATCGAAGAAATATACAATGCT
AAATTACACGTAAATAAATATCACCTTTAAAATAATAATAACATCATTAA
TCAATTGTTTACTATACAAATTCCTTGAATATTTATAGGTATCGAAAGAA
AGTATCTATGATTTGACCATGAAACTCACCGTAATGGGCCCAGGATGTGA
GCCAGAAACAAAAACGTGTTCATCTGTAAAGATTTTCATTCCTCAACCTC
AATATTGTGAGGATCCAAGTGGAATATGTCACAACTTGACAGAGACGTAT
GAAATTCAATGTACACCAGAATTAGTTGGTAAGATCATTAAATTTAAATA
ATGATATGTAGATTTTATATGTTTCAATCCGGTTCATAGTTGATCCCGCT
GTTCCATCAATCAACGAAGATTTTGAAGACGTTCCTAATGCTCATACCGA
TCCCATTTTAAAAGAAATTGGTGAAGAAGCAACCAAATTTTTGTATCATA
AGTTTGATACAACTAATGCATGCCCCATTCATTTAAGAGAAGTGGTTAGA
GCGAAGAGACAAGTCAGTTATTTTTTTGTTTCATCGTGAATGTCTTCAAA
TAATTAATTACCTATTTTTTTCTTTCTTATAGTTAATAAGTGATTCAATC
AATTATGAAATAGAGTTGCAGGTGGAAACAAATGGAGCTGACTTTGACTG
TGAATATGTTCATAAAAACTGTGACAACGTTAAATTGCATCAACCTCCAC
TTCATTTATGTCCTGGAAAAAAGTTTTGTCTCATCCCTGTAAAGCTTAAT
GAAATCAATTGCGTTGAAATCAATCAAAGTAAGTATATTTCAGTCTTTGA
CACATAAGAATTTTTAATTAATGAAGTTTTTATATCACTTTTCTAGTATT
TTTTCGATAA
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