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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s139 | supercontig | LSalAtl2s139:22566..31405 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002149 >EMLSAP00000002149 ID=EMLSAP00000002149|Name=EMLSAP00000002149|organism=Lepeophtheirus salmonis|type=polypeptide|length=497bp
MFIFNIQCKDVLWVFLLSSILTKSSEGTHRIQKRGSSQRRIDEGGSLFSF
ALPFLKSLGLPKTSVFNNLLSENKTEKYLLPRAAMPGKGVSSLEKGFKLI
RDALFTVEFNGAKLSIKSEAEANARNEDVSGRITTAPRCTTPNKGNGKCL
DIQYCPILLADFATLRKSICFKTGFVPGVCCPDQGYKNLIFRNEFRSWTL
ELLILKKKNDKFEENEVINDHSNDSIKGDSTNATSINQNESPQCGISQKP
QSRIVGGKATYEGEYPWMAAIYLHGGGRTEFWCGGALVSERHVITAAHCT
KDAKKKQFKARQFTIRLGEWDLDDKETYSREYEIVDVIAHPDFKANGFYS
DVAILKTIEPVEFSEYIQPICLPTGSMKNDNFLGTLPVALGWGATHYRGK
EVNKLRGVALPVWNNKDCDGAYFQPITEVFLCAGYASGGRDACQGDSGGP
LMLYSQKRKAWVLIGVVSFGNRCAEAGYPGVYTRLTHFLDWILINLN back to topmRNA from alignment at LSalAtl2s139:22566..31405+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002149-697996 ID=EMLSAT00000002149-697996|Name=EMLSAT00000002149|organism=Lepeophtheirus salmonis|type=mRNA|length=8840bp|location=Sequence derived from alignment at LSalAtl2s139:22566..31405+ (Lepeophtheirus salmonis)
TGCAGTTTAGTTTAGTTAAGGTTTTGAGATCGGTGTGGAGTGAGAGACGA
CAGTGCAATACTACCTAAAAAGTTATTCTTTAGATATTATTTATTTTTTT
AAATTATTTTCATTATGTTTATATTCAATATTCAATGTAAAGGTAAGATC
GGCTCAAAGAATTAGTAATGAATCACTATTACATATAATATCTGCTGTAT
TTTCTCTATTTAACAAAAAATGTAATGCCAACGTTATTTTACCATTTGTA
TTTATAATTTAAAGTTTAGATACATAATTGATTTCGTGATAAGCATTTTA
TTTGTTTTTTGAATGTTCATTTGTATCCCATTTGTTCTCAGATGTCCCCA
AATTAATAATCATTGAAATGTCGTTATTGCTGAACTTACGACGCCTTTTT
GGTTCACTCTTATCAACAAAATAAATGCAACAACAATACGGATATAGGCA
TTTCCTTTAGAATGTAATTTTTTGTAAAATCTTAGGCCTAATATATTATA
TTATGAAAGAAGATACTTCCGTATCCTTTTGGAGTATGTTTTAGCTTTTG
GGTAATCCCTCGCTTGTTTCAAGGGTTTACTTCATTGGAAATAAGTGTAT
TCCTTTAGAAATACACAGAAATCGACATACATATGTAAATGAGTCAACCC
GGATACGGTTATATAAAAACCATTTTATAAACATCATTGTTGGCTAGTTA
TTTTTGCGTCATTTACCTCTCATTTTCTAGCTTTTCATACACCTACTTAC
AAATATAACAATAATTATTTTAAGGACAAAGATAAAGACTGGAATGTGAC
TGTCCTTTTGTTGTACTTGTACATTGTGATAAGTAGTGTTGAGCCTCGGT
CCGTGAACGATTTTTTATCCAGTTCGGTTTAAAGTGATTTTATCGAAATT
ACCAACTGTTTTGATCATTTTTTTTTTTTTTAATTTCTTGAAAAGTTGTG
TGATGTGATAAAAGTACCGACGTGAGACCAATCTGTACCAATATTTCGAT
CCAGGCCGCGGTTAAAAACAGTAAATTGAAATTTACTTCTTTTTTTTATT
TTTATAGTGTCATTTTTTAAGACTGATTCTTTTGTAGAGATAATTTTATT
ACGATACCCGATCAAGACCGAAATTGGACCGAATTAGTTTCCAGTCTCAC
AAAAGCTATAAAAAAGTATCGTATCGGATTTCCAGACCGAAACCCAACCC
TAAAGATAAGATATCTTTTATCAATGTACATAAATAATTCATTTGAAAAT
GATTATCATTCAAAAGGGAATCATGAAGGGATTTACCTAAATATCTTGGA
AATTATAAATAATAAGAAAAATATATAATTTTTCAGATGTCCTTTGGGTC
TTTCTACTATCTTCGATCCTCACAAAATCCTCAGAAGGAACGCATCGTAT
ACAAAAACGGGGTAATTATATTGCATAATATAAATAAATATATGTTCATC
CATAAATTTGGGGATTGCATCAAACATAATAGATAATAATTATATGTAGT
TCAATTATACGAAGGTTCTGATTTCAAGCGTTCCTTAAAATATAAATCAT
AGGCGTCCTTGTCCATGAATTTAACACAGAATACAATCTGCCAAAGGGGT
CATTTGGAGCCTTATACATTTCCCCCTTCCCCTCCGTTAAAATATAAGTG
TTAAAATATTATTTTAAATATTTTCGGAAATGGCATATTGCATAATAAAT
CAATTACTCTAAAAGTTCAAAATTAAACCCCCTATGGCGGKTCTATTTGT
GTTAATAATAATGTCAATAGATTTGGAAATTACTACAAAATGTAATTTGA
TCATCTTTATAAATGTCAATTATATATTTAATTAACTTATATTTGTCATA
TACAGGATCATCACAACGTCGAATAGATGAGGGTGGAAGTTTATTTTCGT
TTGCACTCCCATTTTTAAAAAGTCTTGGACTACCTAAGACAAGTGGTAAG
TTGATTTACTAAACTAATTGGTCCTTGATTGACAATCCTACCTTAGACAT
TTTTGCTTTTCTATCAATATAAAAACCAATTTCCTGACTTCTACTAACTT
TTAAACTCAGACAATAAGCACTCCCGCTTATACGACATTTTGACCAAGTC
CAGCTCTGATTTTTCCAACTCTCTAACAATTATCCTCAAAAAAAACGCTT
CCATATTCCCTTTTTGATCAAAAGACAAAGCTAAAAACCAATACTGATGA
CAATACGTACGGCAGTGGTCCTAATTACACGGTCTATTCATGACATTAAA
AATACCGCGATTACAGTCTTTAACAATCTTCTTAGCGAAAATAAGACGGA
GAAATACTTACTTCCAAGAGCAGCAATGCCTGGGAAAGGAGTAAGTTCTC
TTGAAAAGGGCTTTAAATTAATCCGTGATGCTTTATTCACAGTGGAATTC
AATGGTGCTAAGCTTAGTATTAAAAGTGAGGCTGAAGCCAATGCCAGAAA
CGAGGATGTTAGTGGAAGAATTACCACTGCTCCACGATGTACAACACCAA
ATAAGGGAAATGGAAAATGCTTAGACATTCAATATTGTCCTATACTTCTA
GCAGACTTTGCAACACTCAGGAAATCCATTTGTTTTAAAACAGGATTCGT
ACCGGGCGTGTGCTGTCCAGATCAAGGGTATAAAAATTTAATTTTCAGGA
ACGGTGCCACGAAATTGAAACTGAAAATTATTAACAAGCCCCTTCTCATT
TCCCCCCTTTATCATATCTAAAAGCCATCACACCTCCATTTTTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAC
GGAAACGAAATAACATAATAGGCAAATCTAATTTCTAGAGTTTCGCTCTT
GGACTTTGGAACTACTGATACTAAAGAAGAAAAATGATAAATTCGAAGAA
AACGAAGTTATTAACGACCATTCTAACGACTCCATAAAAGGAGATTCAAC
CAATGCTACTTCAATTAATCAAAATGAATCACCCCGTAAGATGAACTTTA
ATCGATTGAAGATTTAATTTATTATCATGCTTCTTTTAAGAATGTGGAAT
TTCCCAAAAACCTCAATCGCGAATTGTGGGCGGCAAAGCTACTTATGAAG
GTGAGTATCCATGGATGGCAGCAATCTATCTACATGGAGGAGGCCGAACT
GAGTTTTGGTGTGGAGGAGCACTTGTTAGTGAAAGACATGTAATTACAGC
TGCTCATTGTACTAAAGATGCCAAGAAAAAACAGTGAGTCTGAGAACCTT
TTAATTCGACTTAACTTTCTTTAAATTCAATTTCAGATTTAAAGCACGTC
AATTTACGATTCGATTAGGCGAATGGGATCTTGACGATAAGGAAACTTAT
AGTCGAGAATACGAAATTGTAGATGTGATCGCACATCCAGATTTTAAAGC
AAATGGATTCTACAGTGATGTTGCGATACTCAAAACTATAGAACCAGTGG
AGTTTTCTGAATACATTCAACCAATATGTCTACCCACGGGCTCAATGAAG
AATGATAACTTTCTTGGAACTCTTCCGGTTGCCCTAGGATGGGGAGCAAC
ACATTACCGTGGAAAGGAAGTGAACAAACTTAGAGGAGTTGCCCTTCCAG
TTTGGAACAATAAGGACTGTGATGGTGCATACTTCCAACCCATCACAGAA
GTTTTTCTTTGTGCTGGATACGCAAGTGGAGGAAGAGACGCATGTCAAGG
AGACTCAGGAGGMCCCTTAATGCTTTACAGTCAAAAGAGAAAAGCTTGGG
TATTAATAGGAGTGGTATCATTTGGAAATAGGTAAGATGATTATTTTATT
TGAAATAGTATTAAAGAACATGAGATCAAAAATGAAGAAACCCCAAATAA
TAAGATATTTTTTTAAATACATATCTGACTTGTTCAAAGCCAATGTCTAT
AATTAGTGATTTGAAAATCACTTCAAAAATTAAAAAAAAATAGGAAATCA
AGAACTACGAGTAGTGCTTTGTAATGTATGCGTTGATATAGCGTTGATAT
TAATTTTCATCACGGAATCTAGAGTTAGAGCGCGATCTGGACTTGGAACG
AGACCTAGATCTCCTTTTGTCACTGGGAGAGCGACTTCGAGAACGTGATC
GAGACCTAGAATTTGATCGAGACCTGGATCTGGAGCGTGATCTGTTACGC
CCATAAGATCCTGAACGAGATCTTCTATGTTCTTCAAAGACTTTGAGACG
TCGACCATCCAACTCGAGTTCATCTTGGTGATCAATAGCATAGTCAAGTC
CTAAATATATAAAATAACAATAAGTTGATCTAGTATGACTAAGTATTATA
TCATTTGCACCTCTTGAGCTAGCAAATTCAACCACTCCTTCTCCTTGACG
TGGGGTATGTGCATTGGTGTAAGTAATTTCACCTGCAGCTCTAAAATAAT
CTTTCAAATCCTGAAAAAAATGAATATAATATATAATAAATTTTCAAAAG
CAATTATGTATTGCAATTATGTACCTGCCAAGATGTTCGTGAAGAGAGAT
TCTGAACAGTTATTCTGTAGTTGGTTCTAGGTCCAGGAGGATTTCCTCTA
CGTCCTCGATCCCCCCTAGTATCTCTACGGTCATAACCTCCTCCTCCCCC
TCCTCTTCTTTCATACCCTCGGTCTCTGTCTCTTCCTCTACGTTCACGTG
GATCCCTAGCCATCTCCACACGAACTCTRCCTCCTTGAAATTCTTTTCCA
TCCATATCATTGACTACATCATCCGCGTCCCTTCAAGGAAATATAGAAAG
ATGAAAAAAAAACTATTTCATAAAGTTGGTCTTATTAATTTGTATGCTAT
AACATGTGTATCTCTGCCTTGAATCTGTATAATGTGTGGAGTGACTGACT
CTGATGTGGCCAAAATTAAAGTCTTAGGTGAACTCAAAATATTGCATAGT
GTAAAAACTGTACTCCACTTCACATTAAAAAAATGAAATTTGGACAAATT
GAAATCACATTTAATCTTTTTTAAGTGCGTGTGTGGTTTTCTGACTCGAT
ATACTTACTCATAATTAAATCGGGTGATTGCCAAGAATTTTTAAGCGGTA
GTAAAATGAACTTTTTCAATGAACATGATAAACCAAATAAGATATTTAAT
AGTTTACTCTAATTTCTGATAAAATATGAGAAGATGAAGTAGAAACGTAA
TGATCCCACAGACAAATAAAGCCCTCGTCAAAACTACAACCTCTTATCCA
CATATTCTCGCTCGCTTGCTTATTTATCGTTTTGTTTTTGATTAAATAAT
AAAGTACGGAGACGACGAGGATTATCTTCATTTGAATGCATCACCGATTT
CAAAACATAATAACATTTAAGATAAAGATTTTAATATATTTCCTGGGCCA
CATCAATGCGATTCCATACACCTTTAACACATTATACGAGAAGCCTGATA
TGAAATAATCTAACGATCCGCGATGCGATCGTTCGATTACAACCTTCAAA
ACCACGCAACCAAGACGATCAAGTGGTCCTGTATATACATTCAAATAAAA
GGTTTTGTCAGTAGTTACATTATAAACAAACTCATAAAAACAATAAATAT
AGTCTACACATAACATAAGTCAATAATCATATGTTACTTTTTACACTGTT
TGTGAGGTTAAATACTTGATGAGTAGTTATTGCCTTGCTTTACAGGAGTT
TGCAATTAGTTTTTCTAGATCTAGTTATATTTTTTGCAATTTTTAGTAGT
TTGAAAATGATGAAATTGAGGAATTCATGGGTAAAATTATTTTCTGTAGG
ATATAACATTGGCATATTTGTTTTTTAAATGTCATTACAAATTTAGGCTC
ATAAAATATGTAGAAGATAAAAATTAATAAGAGGCCAGTACTCATAGAAT
CAGGATTGGAACCTCACATCCTTTGTTTAACATTGACTTGTCTCATTCAT
TTGATCATGAGTAACCCATAATGGACATAAAACAGTTTTTAATAGACGAA
GAATGTTTGTATGATCCATGGGTATGGTTTACAAGTTTGCCCACTCGTCA
TATTTTCTCTTTCCGTCTCGAAATTGTAGACAGTTTGAGCGACAAGCTGA
AATTCAATTCTTGCAACTTTTCCATAAGCAAAGTGAATAATATATCAGTA
TTGCCATTGAAGTAGAAGAAGAGGAATTTAGACCCTTTTGAGTAATTTGG
ACAAGTAGTATTTTGTAGGATCTTGAAAGTAGATGAGAGGTCTCATTATG
TGGAGGAGTAATGAGTTCGTCTCTTATTGATTATTATTAGGGAGGGGGTT
TGTTCTCGGACTCGAACTGTGTAATAAGGGATGAGGAGATCACATTTCAC
TATGTAAGTCACTACAACTTTTCCTGTAGCGACTATGATCCATCATAACA
CCTTGTCATCTCTTCCACCCTCAGTCCTAAGTGCACAAACCCCTCCCGTG
ATACTCAATAAGAGATGAACTCACAATCTCCTTCACACATTCAGACCTTT
CATCAACTTTCAAGATCCACTTATCAATGAATTTTGTCTCCAATTTCGAC
ATAGAGAGAGAAAATATGAGGATCGGACAAACTGGTAAAGCGAACTCTGC
TCCATTATGGGTCATACATGAGAAATGCAAGTGAAAAGGAAGGAGTCAGA
GAGAGAGACTCAGAAGAAGTGGTACTCAATTCAAACCTCGGATCATCAAA
CTCCACAAATCCATAACCGGACTTGATCACAACCTCCCGAATACGACCGT
ACTCCTTAAATAACTTTTCCACATCTCGCTCTCGTACATTCTCGGGTAAA
TTACCCACGTAAACCCGTGATCCGTTAGGCATATTTTGAATTCCAAAATG
GCGAGTCTTCTGTTGTCTGAAATTGTTGTCTTATTTTTCTTGGTGTTTTT
TTTTTATTTTACAACTTTATATTATTATTTTCCCTTTCTAGCTTATTTCT
ACCTCAACTGTTTGAGTGAGTACTCATACTATCTGGAGGGTCACCGGCGA
CAATCACGCAACCTGTTCTGACTAAAAAAAACTATCTTTTTTGGTGAGAA
ATAAATACATATTGTGAAATATGCAGAGCTCAGATATAATTATTATAAAT
CTTACCTAACCTCTAGAAAATATACGAATAATAATAAGTCAACATTAAAA
TTTTTCTTAAAGCTACACACAAACAACAATTCATTTTTCTTAATTAATAA
TCTGAATTATGCGATGCGAATCCATTCGACTCTCTTTGCAAATACACTCT
ACTAAATAAATTAATATAATCAGTATTGAAAGATAGAACGAGCAATCATA
TATAATATTAATTAGTTATTTGAATAAAATTTATTGAATATTAATCCTAT
GCAAACACGAACAGAGGCTGATACTTTATTTTTGAAGATCAAATTTACTT
TAGAAAACCTTTTGACATATATCATATCTTCTTACAATTTTCGTTGTATA
CATTCAGTAAGTCCATCATTTTTGCTTCATGAACAATTTTTTAGGGAATT
GACATATTACACTTAAATGAAATAGTTGGTTAAAATACCAAGTGATACTG
ATATAAAATTACAACTACTTTAAATATTTTAGTTGTATAATTGTACTAGG
TTAATATTAGTTTACCAAGAGGAATTATTGATTAAATATGAAGCTTTTTT
CACCAAAACAGGTTGCGTGATTGGAGATTGCACTCTTCCATATAGTATTA
AAACTCATGGGTTCTTTTCCCCCCCTTCTCTGAGCAGCTCAAAGCATCAA
GCGCTGCGCAGCTAGTAACAAACAATAACGTACCTAAATGAAATAATATG
TGTAAGGGGGCCGGGAAATGATGTAGTGAACGTGTGGCGAAGAACTTTTA
GCTATTTTAAACTATAATTTTTTTCACTTTATCTTCCAGGTGTGCGGAAG
CGGGCTATCCAGGGGTTTATACACGACTTACTCATTTTTTGGACTGGATC
CTTATTAATTTGAACTAATTTATGAGATGAACCATTATTCATTAGTATTT
ATTGTCCAAACCATTGATGCAATTACAGTTTGTTATATATTACATGTTCA
TATATATTTATTTATATCTACGGTTTTTTTTAAAATTATTTGTTAAATAT
AATTATATTTACAAAATAATATACTCTTCAATAATTATTAACTTGTTTCT
TTATTGGGTTACAATCAGTTAAATGCAATAGTTTTAAAGATGGGTTAATT
AATAAACTTATTATAATTATTCAACAACATCGATGAAGACTTTTCATAGG
ACAAGCACCGGTTTTATCATGATCCACTAATTTATCTAAATCATACCAAT
CATCAACAACAATTTCCTCACCGTAATATTTCTGTGATTTGATCAATTTT
CCATCTCCCCAAATCTCCAAATCCCTCTTTCCAGGCATGGGAGTATCCTT
ACCATGAGTATACACAACTTTACCCTCCCAAACTCCGTTCTTTTTAACTC
CTTCGCGAAAAGACCCATTGGCCCAAGTCATTTTTGTAGGGCCATTTTGA
TTTCCCTCCTTGTCAAAGAGCCCGACCTCTTTAGAACCATCCTTCCATGT
ATAGGTAAAATTGCCATTTTTTATACCTTTCTTATAGTTAAATTTGAATA
TATCTCCATTTAATCCTGTAAGAATGGCTGGGCCTTCTAAAAAGCCTTCC
TCATAGCTCCTTTCCTCTTTATCCCCATTTCCATTCGTTTCAATGGAAGG
GCCGTGTTTGATTCCATTTTGATAATGAGATTCATCCACAAGTTTGTCCG
CTTTGTAAATTGCTTTTCCTATAATAAAAAAGTGATAATAATGGGAGAGA
TGGATTGTGCATTGAAGTATTCAAAATCGTAGTATTAATA back to top
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