EMLSAT00000002171, EMLSAT00000002171-698018 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002171
Unique NameEMLSAT00000002171-698018
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s13supercontigLSalAtl2s13:1011691..1012373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002171 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002171EMLSAG00000002171-684937Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009584EMLSAE00000009584-718512Lepeophtheirus salmonisexon
EMLSAE00000009585EMLSAE00000009585-718513Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780257auto780257Lepeophtheirus salmonispolypeptide
EMLSAP00000002171EMLSAP00000002171Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002171

>EMLSAP00000002171 ID=EMLSAP00000002171|Name=EMLSAP00000002171|organism=Lepeophtheirus salmonis|type=polypeptide|length=200bp
MMDVDRVLHCGGFKIKRWYSSALSSKESSIAQICDPLGIVTPVLIELRIA
FQSQARGINWDSVIEEEALIERPEINGFADGGELTYGAGVLFRWRVGDGS
FEVRFIAAKSYVTPIRIKSIPRIELNGLLIMTRLMKSIINALHWETKKVY
MWSDSMTALNWIRNNKDSCVRDSRHFFARIFSFRSSNAKPGGCSHKTYNR
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mRNA from alignment at LSalAtl2s13:1011691..1012373-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002171-698018 ID=EMLSAT00000002171-698018|Name=EMLSAT00000002171|organism=Lepeophtheirus salmonis|type=mRNA|length=683bp|location=Sequence derived from alignment at LSalAtl2s13:1011691..1012373- (Lepeophtheirus salmonis)
ATGATGGATGTAGATCGTGTTCTGCATTGTGGAGGTTTTAAAATAAAAAG
ATGGTATTCCAGTGCGTTAAGCTCAAAAGAATCATCTATTGCTCAAATAT
GTGATCCCTTAGGAATAGTTACGCCTGTTTTGATTGAGTTGAGAATAGCT
TTTCAATCACAAGCACGAGGAATAAATTGGGACTCAGTTATAGAAGAAGA
AGCTTTAAGTATGCAAGACAAAATTTCAAATCACTGGAACTGTTGAAGGA
AGTACAAATAATAAGATCATTACGTCCAAAAAATGTAGTAGAAAGACCTG
AAATTAATGGATTTGCTGATGGAGGAGAATTAACTTATGGAGCGGGTGTA
CTTTTTCGATGGAGAGTGGGGGACGGAAGCTTTGAAGTCAGGTTTATAGC
GGCGAAGTCTTACGTAACTCCTATTCGAATCAAAAGCATACCTAGAATTG
AACTAAATGGATTATTGATCATGACAAGACTGATGAAGTCTATTATAAAC
GCGTTACACTGGGAAACAAAAAAGGTTTATATGTGGAGTGATTCAATGAC
GGCATTAAACTGGATTCGAAATAATAAAGACTCTTGTGTCAGAGATTCAA
GACACTTTTTCGCCAGAATTTTTTCGTTTCGTTCCAGCAATGCAAAACCC
GGCGGATGCTCTCACAAAACATATAACCGTTAA
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