EMLSAT00000002186, EMLSAT00000002186-698033 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002186
Unique NameEMLSAT00000002186-698033
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1400supercontigLSalAtl2s1400:29785..30148 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002186 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002186EMLSAG00000002186-684952Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009647EMLSAE00000009647-718575Lepeophtheirus salmonisexon
EMLSAE00000009648EMLSAE00000009648-718576Lepeophtheirus salmonisexon
EMLSAE00000009649EMLSAE00000009649-718577Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769866auto769866Lepeophtheirus salmonispolypeptide
EMLSAP00000002186EMLSAP00000002186Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002186

>EMLSAP00000002186 ID=EMLSAP00000002186|Name=EMLSAP00000002186|organism=Lepeophtheirus salmonis|type=polypeptide|length=79bp
MCPEQCGVCQASCRDTGASCLEHSESCLQKSIEKQCPKSCASCDDCEDLI
NSDLCSGYTHRCEEDTSVQYACRKTCELC
back to top

mRNA from alignment at LSalAtl2s1400:29785..30148-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002186-698033 ID=EMLSAT00000002186-698033|Name=EMLSAT00000002186|organism=Lepeophtheirus salmonis|type=mRNA|length=364bp|location=Sequence derived from alignment at LSalAtl2s1400:29785..30148- (Lepeophtheirus salmonis)
ATGTGCCCAGAACAATGTGGTGTTTGTCAAGGTTCGGCAAAAATCATAAT
ATTATTATAATAATGAAGCAAAATGATCCATTCATTAAATTATTTTTAGC
AAGTTGCAGAGACACAGGTGCTTCGTGCCTTGAACACTCAGAGTCTTGTC
TACAAAAAAGTATAGAAAAGCAATGTCCAAAAAGTTGTGCTTCTTGTGAT
GGTTTGAATTAAGATATTAATACATGATTAATATATATAAGTAAATTGTG
TTTTTTTTAGATTGTGAGGATTTGATTAATTCAGACTTATGCAGTGGTTA
CACACATCGGTGTGAGGAAGATACAAGTGTTCAATATGCGTGTAGAAAAA
CATGTGAACTTTGT
back to top
Add to Basket