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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1424 | supercontig | LSalAtl2s1424:34971..40621 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002237 >EMLSAP00000002237 ID=EMLSAP00000002237|Name=EMLSAP00000002237|organism=Lepeophtheirus salmonis|type=polypeptide|length=662bp
MQAAAPSGPSSQTGNGAAPQGASAVSQSAQQTNYPMASLYVGDLASDVSE
AMLFEKFSSAGPVLSIRVCRDMXTRRXLGYAYVNFQQPADAERALDTMNF
DVLKGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKSIDNKAMYDTFSAFGN
ILSCKVAQDPTGDSKGYGFVHFETEEXATQSIAKVNGMLLNGKKVFVGRF
IPRKEREVELGEKAKKFTNVYIKNISEDVNEEVLRELFSKYGKISSLTIM
KGEDGKSKGFGFVSFETPEAAESACDCLNGTEFHTKTIYVGRAQKKAERQ
MELKKKFEQMKIERMSRFQGVNLYVKNLDDSIDDEKLRQEFSLYGTITSA
KVMTEEGSGRSKGFGFVCFSSADEATKAVTEMNGRIIVAKPLYVALAQRK
EERKAQLASQYIHRVTGMRMPPMGPMSFPQQGGFFMPAMAAQPQRFFSPG
QTPIRGAGQPRWPQQPRGVPGXAGVVQHQYRSARPGGAPRMQHGXQRPMG
GQQMIPMITTRPGMAPGNAVAAAAAAVQQMPAAGSTARPQGFKYASNVRN
SPQVAPVAQPMPIQHQQQEQAVLIQGQEPLTVNMLTTATLEEQKQMLGER
LYPLIMRIYPDLVGKITGMLLEMDNSELIHLLECQESLKSKADEAITVLR
LHQAQESQPEEP back to topmRNA from alignment at LSalAtl2s1424:34971..40621+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002237-698084 ID=EMLSAT00000002237-698084|Name=EMLSAT00000002237|organism=Lepeophtheirus salmonis|type=mRNA|length=5651bp|location=Sequence derived from alignment at LSalAtl2s1424:34971..40621+ (Lepeophtheirus salmonis)
GAAAAAAGGTAGCATCTCTATTGTAGATGGCGACAAACTTTGGGCAGAAC
CGGAAATGATCATATCAAACTGCGCAATTGTATAAATTAATGGAACAAAA
CGTGATAAAATGTAGTAATGCTAAAGTTTATATAGGAAAATAAATGAGAA
ATTTAATTAAAAAGGGCTCAGAATGAGAAATTGTCGTCAAAAATACTAAA
AAACTGTAGAAAAAACGAGGAAAAGAAAAGAGGGGAAGAAGAAGGAAGCG
GGCTGTTGGGCAGAGCGTATATAAAAAGAGGAGTCACATCCCATTTCCTT
TCACCTCCTTCTGTCGCGTTGCTCAGTGAACGTCTCTCTAAAAAACCAAA
AAAACCAAAAAAATACAAAAACTTATAAAATTCATAAAAAAAAAATTAGA
AAAGGTTTATTTTCTATCCCCTTGTTTCTTTCGTCCCCTCGTATTTCCAT
CAACTTAACTGAGATCCTCATCATCCGACACTCATAATGCAAGCAGCAGC
CCCAAGTGGACCATCTAGCCAGACAGGAAATGGAGCAGCTCCTCAGGGAG
CCAGCGCTGTGTCTCAATCCGCTCAGCAGACCAACTATCCCATGGCCTCC
TTATATGTTGGAGACTTGGCCTCTGATGTGAGCGAGGCGATGCTGTTTGA
AAAGGTAAGGTGCTGCCCCATGGCGGAACCCATTTCTAGTTTGCTGTTTC
TCGCTTAACTGAAGGAAAGATTTTGTCTCGTTTAGTTTTCATCAGCGGGC
CCCGTGCTCTCGATCCGAGTCTGCAGGGACATGGKGACGAGAAGGKCTCT
GGGATACGCATACGTCAACTTTCAACAGCCAGCAGATGCTGAGCGAGCCC
TGGATACTATGAACTTCGACGTTCTCAAGGGCCGCCCTATTCGTATCATG
TGGAGTCAAAGAGATCCCAGTCTTCGACGTTCTGGTGTAGGCAATGTCTT
CATCAAGAACCTGGATAAAAGCATTGATAACAAGGCCATGTACGACACAT
TCTCCGCTTTTGGAAACATTCTCTCCTGCAAAGTGGCTCAAGATCCCACG
GGAGACTCCAAGGGATACGGATTCGTACACTTTGAAACGGAAGAASCTGC
CACTCAGTCCATTGCTAAGGTTAATGGTATGTTACTCAACGGAAAAAAAG
TGTTTGTGGGTCGTTTCATTCCTCGCAAGGAACGTGAAGTGGAACTTGGA
GAAAAGGCCAAAAAGTTTACCAATGTTTATATCAAGAATATCTCAGAAGA
TGTGAATGAAGAAGTTCTCCGTGAACTCTTCTCCAAATATGGCAAAATTT
CCTCTCTTACGGTAATATTTTATTTATTATTGACTTGGGCTATATGTATG
TATGCCTTTGTCTCATCTTGTGACTTGATGCACTCGCTCATAATCTTACT
TGTCGTCTTTGTTCATTTTTGAGTGCATTGACATTGGTTCTTACCTTTGT
TCTTCTCTCGAGTTGCCATTGCTGCGCCTTTTATGGCAACGCCTATTGCG
ACGACCTTGATAAGAGAGAAGGCGCGAGTGTTTTTTTTTTGTGGCATGAT
AAAATTACTTCTTCAACTCGCACTTCAAATGAATTCACTGCTCTTTGAGC
AGTCCTCTTCTATCCATATATAAGAAGTTAGCTGATATGATGATTAAAAC
TTATCCGTGTTTCACCTGAAAATACTTGATTAAACTTTATTCTGAATCAT
GCTGCTTCTATATACTAGTGCCCGTGCCTCATAAAAAAAAAAAGATGAAA
TAACTTACAATCAATACAATGAACCTCATTTATCTTTAGATTATGAAAGG
AGAAGATGGAAAGAGTAAGGGATTTGGATTTGTTTCTTTCGAGACTCCTG
AAGCAGCAGAGTCAGCCTGTGATTGTCTTAATGGCACCGAATTTCACACA
AAAACTATTTACGTTGGAAGAGCTCAAAAGAAGGCTGAACGTCAAATGGA
GTTGAAAAAGAAATTTGAGCAGATGAAGATCGAAAGAATGAGCAGATTCC
AAGGTGTCAATCTATACGTCAAGAACTTAGACGATTCAATTGATGATGAG
AAGCTCAGACAAGAGTTTTCATTGTATGGAACTATCACCTCTGCCAAAGT
CATGACGGAAGAAGGAAGTGGAAGAAGTAAAGGGTTCGGATTTGTCTGTT
TTTCCTCTGCTGATGAAGCAACCAAAGCTGTAACTGAAATGAATGGAAGA
ATCATAGTGGCCAAACCGTTATATGTTGCTCTAGCCCAGAGAAAAGAAGA
ACGGAAAGCTCAATTGGCATCTCAGTATATTCACAGAGTTACTGGAATGA
GAATGCCTCCTATGGGACCGGTAAGTGAAATTTTGTTGTTATACATACGG
TTAGTAGATATGATGATCAAAACTTTATCCGTGTTTCACCTGAAATTACT
TGATTAAACTTTAATCTGAATCATGTAGTTTCGGATTAGTATGCTAATTT
TTAAGTTCATTGTGTTACAATTGTTTCCTTTACTTATAGATGAGTTTCCC
TCAACAAGGAGGATTCTTCATGCCCGCGATGGCAGCACAACCACAAAGAT
TCTTTAGTCCTGGACAAACGCCTATTAGAGGAGCAGGTCAACCACGTTGG
CCTCAACAACCCAGAGGAGTTCCTGGAMAAGCCGGTGTCGTACAACATCA
ATACCGTTCTGCTCGTCCAGGAGGTGCTCCGAGAATGCAACATGGTGWCC
AAAGACCAATGGGTGGACAACAAATGATTCCCATGATAACTACAAGACCT
GGAATGGCTCCTGGCAATGCAGTAGCAGCAGCCGCCGCTGCCGTTCAACA
AATGCCAGCYGCAGGATCGACAGCTCGCCCTCAAGGCTTCAAATATGCTT
CTAATGTTAGAAATTCCCCACAAGTTGCACCTGTTGCACAACCTATGCCA
ATTCAGCATCAACAACAAGAACAAGCTGTGCTCATCCAAGGTCAAGAGCC
CCTTACAGTAAATATGTTAACAACGGCAACCCTTGAAGAGCAAAAGCAAA
TGCTTGGTGAAAGATTATACCCCTTGATCATGAGAATTTACCCAGATCTT
GTCGGTAAAATTACTGGAATGTTGCTTGAAATGGATAATTCTGAACTTAT
CCATCTTCTTGAGTGTCAAGAGTCACTCAAGTCAAAGGCTGATGAAGCTA
TAACTGTTCTTCGTTTACACCAGGCTCAAGAGTCCCAGCCAGAGGAACCA
TGAAATACTAATTTTTAAAAAATCAAAAAAAAATCGAAAAATTTATTATA
AAAAATAACCAAAAAAAATAAAAGAAGTTGCTTGTTTCTCTCCCCCATTT
TTTTTGCAAGGAGATTTTAGTAAACATAAAGACAGAATGAGGTGAAAAAA
ATTATTAAAGTCCAGCATCTTTTTTTTCTTTTCTTTTTACATCATTTATA
TATTAGTTCAAACCTTGAGGTGCGTTTGTTAAAAAACATAAAAAACTATG
AAAAAAAAATCGAAAAATCTACTATAAAAATAAATGAAACTTTTTTTTTA
TTTACTTTTGTTAAACCTTACTGAAAGAGGTGTATACATATGCATATATC
ATTATTTGATTTTATTGATATATATATATCCATACATCTTTCGATTTTTC
GCTCTCTGTACTCCTATTCAAAAACCATCAAAAATATTTTTTAAAAAAAT
AAGAAAGTATAATGTATATTTTCCTTATATTCGTCTTTTTCGTATTGTTG
AATTTAGTGAAAATATCATCCATCAAAATATTCAAAAAAATTATAAAACT
TATTTTTTCTGTGTGCATCTTGAGTCATATCTTGAATGTTTGATGTCGCA
GAAAAAAGTGAAAAATTTTTTTATAACATGAACACCAAATTAAAAAATTA
TCAGGAATAAAAAAATAAACACAATCCAAAATTTATATGTATCCCGTCTT
TTTATTGGTTTATTATGATAAAATTTATGATGAGCCGTGCTAATTTATTT
CTGGAATGATGACTAGGTTCAATTCGCGGCCTACCAACACACAGACCTTC
GTTGTTGGGTGCAATTATATCACTTATCCTTTTTCTTCATTATAGTGCTA
CCTGAAATGGTAAAATGGAAAAGAAGAGTTAATTGATATGAACGAACATG
TTCATGTAACATAGGCGATCGCCTTATTAGAATTTTGATCTGTAATACTA
ATGTGAGAAGGCACTGACTGACCATTCGAACTTCAATTTTATTTTTACCT
CTAAATCTGTAAAATAAAAATACGCATGTTATTTCGTTAAATGTAAGTAG
GAATTAATAATACGTACAGTTCCATCGAGGGGAATGTTGACTTAATACAT
ATTTCTTCAGCTTTTTCATGACAACGCTTATGACAAATCTTTCCACAGTC
CCGACAAACATATCCTTGCTTTCCTAGTCTCATTATTATCCTTTTTTTAC
AGACGGAACAAATTGTACCCCTAAAAATAATATGGTTTTTCTCAAACATT
ATGAAGACATGATATGTACATGTTATTGAATACCCTTTAATATGCTTAGC
GATAAATAAATGGTTATTGAAAACGTGAATTTTAGAGCCTTGTCTTTTAC
CAAGCCGAGTTCCTCCCTTTTTGTGAGGGATAAGGTAATGTCTCAAAAGA
CCATATTCCCTAGTCTCGAAAATTAAAAGGGACCTCCCACCTTTTTTAAT
AGCGTTTCCATTACTTCCAGTTGCAAATGAAGCTGCACTAATGCCCGAAA
CGTCACTCATAGATGATCCATCGCCTTCTCCAGGAAGYAAGAGGTAGGAC
GCACCTAAAAAGAGGATAACAATATAATGTTGGAATCAATTAAATGTATA
TTTAAAATATTTAGTTAAAAAAACGAACCAGAGTCCCAAGATTCCCAACT
TAGTGATCGTGGTCCTTTCCAAACCGATTTCAGTTCTAGACTAAATTCAC
TATCACTATGACTCGAATAGCCATTATCACTGCTATTATTCCCATGATTG
TACCTTAGATCAAATTTTGAATTGGTAACATCACGATTCAATGATTTTAA
TGACTGAGATGAAGATGATATGAGTATTTTCTTCCCTAAACGTGATGGAC
TTGAATATAATCTTCCCCTTGGTCTAAAATTAGAATATTAAATAATAATA
AAAAATGAAAAGAGCACTTTACATAATAAATCAAGTACCTTGGGGAGTAC
ACATCGAGAGAGTATAAACTAGGTCCTGAGATAATACGTTTAAGGGATGA
AATGAAATTTTCCTTGGATTTTTTAATTGGACTAGGTATTGTAAAAAGAT
TGGAGTGGTTGCTCTTTGAAGAACTTGGTTTGACCCTCTTTTTCTTCTCT
GAAACAGGCGATGAAGAAATAGATTCAATAGACAACTCCGTTTCACTAGG
AGGCTCTTCGTCATTTTCCTTCTCTGAATATTTAGTTTCTAAATAATTAA
TTGAAGTTAGATAATTATATTTCATAAAAATTAAGAGTCGAAATATTTTT
TAAAACACTAACTAGATGCATCTTCTTCAAAACCATTCAAGTTGGAATTT
TGTGGTGAAACTGTAGGTATTTGGCTCGGAATATCAGGGATTTCAGTGAC
TCTATTTGATGGAAACTGTTGAAGAAAAAATAAAAACATGTTAGACGTTG
GATGACGAGTGACCAATGTGCTGTACTTTTTGCACTGAAGTTATAAGCAT
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