EMLSAT00000002247, EMLSAT00000002247-698094 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002247
Unique NameEMLSAT00000002247-698094
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s14277supercontigLSalAtl2s14277:190..839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002247 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002247EMLSAG00000002247-685013Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000009947EMLSAE00000009947-718875Lepeophtheirus salmonisexon
EMLSAE00000009948EMLSAE00000009948-718876Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767796auto767796Lepeophtheirus salmonispolypeptide
polypeptide-auto767798auto767798Lepeophtheirus salmonispolypeptide
EMLSAP00000002247EMLSAP00000002247Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002247

>EMLSAP00000002247 ID=EMLSAP00000002247|Name=EMLSAP00000002247|organism=Lepeophtheirus salmonis|type=polypeptide|length=105bp
MDYYCGGDLLTLLSKFEDRLPEDMAKFYISEMVLAIDSIHNLRYVHRDIK
PDNVLLDADGHIRLADFGSCLRLCADGTVQSNVAVGTPDYISPEILRLCS
LKPFS
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mRNA from alignment at LSalAtl2s14277:190..839+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002247-698094 ID=EMLSAT00000002247-698094|Name=EMLSAT00000002247|organism=Lepeophtheirus salmonis|type=mRNA|length=650bp|location=Sequence derived from alignment at LSalAtl2s14277:190..839+ (Lepeophtheirus salmonis)
TATTTGGTTATGGACTACTACTGTGGTGGGGATCTCCTCACACTCCTCAG
TAAATTTGAAGATCGTTTGCCTGAGGATATGGCTAAATTTTATATATCAG
AAATGGTGCTCGCCATCGACTCAATTCACAACCTCCGCTATGTGCACAGG
GACATCAAACCCGATAACGTACTCTTGGATGCTGACGGKCATATACGATT
GGCTGATTTTGGATCCTGCCTTCGCTTGTGTGCGGATGGAACTGTTCAGA
GTAATGTTGCTGTGGGAACCCCGGACTACATTTCACCCGAAATATTAAGG
GTAAGTTTACCTTATACTTTGCTTTTCAAGTACTTAGTGAAAACGTCGAT
GCCAAGTTCCACTTGAAATAGTTTAACTATTAAGAGTTAACAACTAACAA
TATAAATAAAAATAATATATTGATGGGGAGAAGGCTTCGGCAGTAGAGGC
GTCACCATAGACTAGAAACTCTCTCAACCTTTTACTCCGTCTTTCTTTCT
CTTCCCCCTTCTTTTCTGTAGTTTTATATTAAAATTACCTACTTCTACGC
CAAGAGAAGGAAACGCACTCGCCCTCCCTACTAATCACACTTTGAGAGCA
CTTAAATTTTTCTTTATTTCTAGCTTTGTTCTTTGAAGCCTTTCTCGTAA
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