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Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s142 | supercontig | LSalAtl2s142:1083548..1092339 - |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002254 >EMLSAP00000002254 ID=EMLSAP00000002254|Name=EMLSAP00000002254|organism=Lepeophtheirus salmonis|type=polypeptide|length=1918bp
MPLLSEMMGGEVVSYELRPRKNSASLRQSRSRTLYNLRSRFSASHNSNSL NWSDAEGSKEYEIEVDSISEDAEGDSEEDMIKEELDSQTSEPQWNLESRS NSSTHEEKAQELPYDDSLVKSEDLYILNQTQTDSDQILNSTWNHKFGMPS VILEDLFQTLTPRYKSQIRQKTVFNIIENEELVVISFFIHLNSKLHMEKI EVLRNKKNETGIAIGEVFSREKCFNLLQDVTQMNENDHPKSISYSPPIYD SSHPTGEIQSQNKTIISNPEQEYSLNSYPCFHLIDHNYAQDILYKNKLSD HNYSLNILQNSNSCLNSIEVIKTKTNCTQNNSVTDLVVANDTSVQSKSSF IFDVHTLNKFKQIHKRSKGLCTSQLSVSSCGDEKVPHDVELSDFKRTKSN LLYVKSRFNSKENALAKRNINTLSLQKYNNYCNVDKSGDRFSNTENDSFS HIILSKRVTKCGILSNELLKSLRSHYHLTLPKKNPKEDXSSSSESSLSDS DCPDEFTSAKKNTLGTKMYSSSSNKSLPPSKSKKLSQRKKVSSSESSSDD EGNISPTLRKNLKHKVTTSSNSKXDDEGNISPTLRKNLKNKVTTSSNSKL SPSKSQEKPKEDHSSSSESSMSDSDXEKIIKLSKDTNSSTIISSSKKNTS PLKSKELSKENKISSSESGLDGEEDISVAQLKKSPPKIILPLKSQKSCRE FQNSSSESSWSDSNSEKIIKPSKHMNSATRKLVSKKNISPIKSKKLSDIN KINFINLISSDSEYEEYISIATKKSLKEKKSTLKSQNKSQSMQCSSNESS LWDLENITKSKNGKKICSIASNKNVSLSKSQKKPKENYTRYGESSLSDSD SEDKFTFSKNNASGTKTSSSSTKKNVHLSKSNKISERKQISSDELSSDEN IGVAQQKNSQKKGFESSKKKEVLTSNPPKSSKENQSSESSLSDLDSEKRI KSSQHISPVIKISSSKKSVIPIKSLKISERKQISSSEFSTSGSDGEGDPS VTLLGTTSKKEPLMSKNKSKKYISSSSELSLSDSDRNDNLVSSESNKSAT QISPSKKSVVAIKSKKISERKQISSSESSLSDTDSPDCISIIENKNQKKK ILPSNSISAHIKNKNGNNELSYSSSGGLKRTMSTKKNNSLLKLSDASSKE KLLLAGKSCKNIKDTSNPIFNPLKRKFIDGFVSSCKKKINVPISKVISKA IITTSDSSNSDIDNSKSEVSQTSINISSAKNKSKIEKEIIYLGSKISKSK CRSRKNIPVLKETSSIGIISHKSKKRKRELDSTPYLVFKRTKSIQNEILR THAESMNLSSFKSKSVSNLNILNSSNVHQMSETDRTIQDDSQDNPLGYSE LVMGVSKKARKVVKSSKNPVFLRCDNGKDLDHYFDHIPPPQEEVATVSNF LPFESSVNQDDIDLNVGGQKNWELLLQGKSIPGNDFWEDILNDDECQINN DNFSFVEPSSNSSLYKVYGELKFLGDMDVSKRVIGWILEEYKLLRISPLN VFCPINLRLSPQAMQLVTLRFPLLRTGRLDKEEMFIVRQNLKKLMINLKL SPEDVRKLMKELMIGNSRNVKARYYLACFAGQGILDRRLSYEIFRWIASF TVASSKRLTETELELLKTNVNKLKGILRYKRAIDICKFQDVITGGQLRSL MNSKNVKESNYMWSTSDVLSLLRYVFKNYPIKNAIEAEKTKFDFPQIAKE TGFKIHTLRNQLLSLLTLLVNHEKGIYNLDDVIVLIQVAXVVVIMTGILL SIFIICTCIVYFQKRESGLLYLEEKNISIPANSLDCRQGPRAKNSNPHKN QNVWTATSSSKHQSKSNIPILPLAPRSEDSYLPPPTIHITSDNFHHQPFN DNHFLDVCNDGISLNRSLSMFEETPSTFYDRRRSSFDFTQVIPRNNNMKK RIFSGSELSITNHIIPHS back to topmRNA from alignment at LSalAtl2s142:1083548..1092339- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002254-698101 ID=EMLSAT00000002254-698101|Name=EMLSAT00000002254|organism=Lepeophtheirus salmonis|type=mRNA|length=8792bp|location=Sequence derived from alignment at LSalAtl2s142:1083548..1092339- (Lepeophtheirus salmonis) GGATGCCCCTGTTGAGTGAAGTAAGTGTAACTCCAAGGAAGAAGTTTGAA
TGTCGCATATCTGCTCCGGCCAAGTATTTTAGACTTTAGTCTCTGTTATT
ATTACATATTCTAGCACAAGTGTCAGCCGTGGCTTACTCCTAGGTTCGTA
AAATTCTAAGAATCTTTTGAATAGATATTAATATAATATAATGCTATCAA
GTATAATCTCTAAGAGGAAGACTATATTGAATCTAAATAGATGGAGGATT
TATGACTCATGACAAGTTTATTGGTTCTTGCGTTCCTGAATGAATGAATA
CTTCCTAATCTAAGTGATAGCGAATGTTGTGTTCTAAAGTGTTTCTAAGA
GATGATGGGTGGTGAAGTAGTCTCTTATGAGCTTCGACCTCGTAAAAACT
CTGCATCTTTGAGACAAAGTCGCTCCAGGACACTCTACAATTTAAGATCT
CGCTTCTCAGCGTCGCACAACTCCAACTCCTTGAATTGGAGCGATGCAGA
GGGTTCCAAAGAATATGAGATTGAGGTGGATTCCATTTCAGAGGATGCAG
AGGGCGACTCAGAAGAGGACATGATTAAAGAGGAGTTGGATTCCCAAACG
TCTGAGCCACAATGGAATCTTGAAAGCAGAAGCAACTCTTCCACTCATGA
AGAAAAAGCTCAAGAACTTCCTTACGACGACTCCCTTGTAAAATCAGAAG
ATTTATATATATTGAATCAGACTCAAACTGATTCAGATCAAATTTTGAAT
TCTACTTGGAACCACAAGTTTGGAATGCCTTCAGTGATCCTAGAGGATCT
ATTTCAGACTTTGACACCAAGGTATAAATCTCAAATAAGACAAAAAACTG
TATTTAACATCATAGAAAACGAAGAACTAGTTGTGATTTCGTTTTTCATC
CATCTGAATTCTAAATTACACATGGAGAAAATAGAAGTACTTAGAAACAA
AAAGAATGAAACCGGTATTGCCATTGGAGAAGTTTTTAGTCGTGAAAAGT
GCTTCAATTTATTACAAGATGTGACTCAAATGAATGAAAACGATCATCCG
AAAAGTATTTCTTACTCTCCTCCAATCTATGATTCTAGTCATCCCACTGG
AGAAATTCAATCCCAAAATAAAACTATTATTTCTAATCCAGAACAAGAAT
ATAGTCTAAACAGCTACCCTTGCTTTCACTTAATTGATCACAATTATGCT
CAAGATATTCTATATAAAAATAAATTAAGTGATCATAATTATTCATTGAA
TATACTTCAAAACAGTAATTCATGTCTCAATTCAATTGAAGTCATCAAAA
CGAAAACAAATTGTACACAAAATAACTCTGTAACAGATTTGGTCGTAGCT
AACGATACATCTGTTCAATCAAAGAGCTCCTTCATTTTTGACGTGCATAC
TTTAAATAAGTTTAAGCAAATTCATAAACGATCCAAAGGCCTCTGTACTT
CTCAACTATCTGTGTCAAGCTGTGGTGATGAAAAAGTACCTCATGATGTT
GAATTATCAGATTTTAAAAGAACGAAAAGTAATTTATTATATGTCAAATC
AAGATTCAATTCCAAAGAAAATGCACTTGCAAAAAGGAATATTAATACAC
TATCTTTACAGAAGTACAATAATTATTGTAATGTTGATAAATCAGGAGAT
AGGTTTTCAAATACAGAAAATGACTCATTTTCTCATATAATATTGTCCAA
AAGAGTGACCAAATGTGGTATTTTGTCGAATGAACTTTTAAAATCGTTAA
GAAGTCATGTAAGTTTACCATATTCATCTCTATTCCTCCTATCACCTTAT
CTTGAACTTAAACTTCCATATATAGTTTCAATTCGTCGAAACTTACTGAC
AGACAAAACCAATATGGAAAATATTTCAAAGTTTATTGAAAATATTTTCA
TAAATGAAAAAGCCAAGGAAATATTTAATTTGCATCAAAAAAATATTTTC
AAAACAATTGATGTATATTACAACAAGAAATACGAGTCTATTAATAATAT
ATGTTCCTTTCAGAAAGAAGAAGAAGAAATTGGGGAAAATAAGAATAAAG
ACTCCTATTCAAATTATAAGACTAGAAAATATGATGAAGTATTGACCGAC
TGCAGTGCAATTACTTATTCAAAAAATGAAAGATATCCATCTCGTAACAT
AGAAATCTATTCATCAAAATTTATTAGTGAAGTTGAAAACCAGGATTTAA
ATGAACAAGATAGCAACTACGTTTTAAGAAATAAAAATAATTGCAAGACT
CAATCTAACCCTACTTCTAAAAAAATATTAATTTGTGAGCCAAATATAAG
ATGTAATGATAGCATTAAAAACAAACATGTTATGGAACATTCTTTATCTT
CCTTAGAGATAAATATATCACCAGCTACAACTGAGAATCTCTTATTTATC
GGTTCGAAATCTAAAAAAATATCCAATAGTAGTATTATAACATTGAATTC
AGATGGCGAAGAAGATATCAGTGTTACTCAACAAAAAAAATAAAGGATAA
ATTAATAAGTTCTTCAAATTCAAAAGTATCCCCTTCAATGTTTAAAAATA
AAACCAAAAAACATCGTAGTAGCATTATAACATTGAATTCAGATGGCGAA
GAAGATAATAGTCTTACTTTACAAAAAAAATAGAAGACAAATTAATTAAA
TCTTCAAATTCAAAAGTATCACTTTCAATGCCTGAAAAACGAACCAAAAA
CCATCGTACTAGTTCTAGTGAATCAAGTTTGTCAGACTCAGATTGTCGTG
ATGAATTTACATCTGCTAAAAAAAATACATTAGGAACTAAAATGTATTCT
TCTTCTTCAAACAAGAGTGTGTCTCCTTCAAAATCTAAAAATTATCCCAG
AGAAAGAAAGTTAGTTCTAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTAAAACACAAAGTAATTACATCTTCAAAT
TCAAAAGTATCACCTTACATTGCCTAAAAAAAATCCCAAAGAAGATAKTT
CTAGCTCCAGTGAATCAAGTTTGTCAGACTCAGATTGTCCTGATGAATTT
ACATCTGCWAAAAAAAATACATTAGGAACTAAAATGTATTCTTCTTCTTC
AAACAAGAGTTTGCCTCCTTCAAAATCTAAAAAATTATCCCAGAGAAAGA
AAGTTAGTTCTAGTGAATCGAGTTCAGATGATGAAGGAAATATTAGTCCA
ACTCTGCGGAAAAATTTAAAACACAAAGTAACTACATCTTCAAATTCAAA
ANCAGATGATGAAGGAAATATTAGTCCTACTCTGCGGAAAAATTTAAAAA
ACAAAGTAACTACATCTTCAAATTCAAAATTATCACCTTCAAAGTCTCAA
GAAAAACCCAAAGAAGATCATTCTAGCTCCAGTGAATCGAGTATGTCAGA
TTCGGATAGKGAAAAAATTATTAAACTTTCCAAAGACACAAATTCATCTA
CTATAATATCATCTTCAAAGAAGAATACCTCACCATTGAAATCTAAAGAG
TTATCCAAGGAAAATAAAATAAGTTCTAGTGAATCGGGTTTAGATGGCGA
AGAAGATATTAGCGTTGCTCAGCTGAAAAAATCCCCCCCAAAAATAATAT
TACCTTTGAAGTCTCAAAAAAGTTGTAGAGAGTTTCAAAATTCCTCCAGT
GAATCAAGTTGGTCAGATTCGAATAGTGAAAAAATTATTAAACCTTCAAA
ACATATGAATTCAGCGACTAGAAAATTAGTTTCGAAGAAGAATATATCAC
CTATTAAATCTAAAAAGTTATCCGACATTAATAAAATAAATTTTATAAAT
TTGATTTCATCAGATTCGGAGTATGAGGAGTATATTAGCATTGCCACCAA
GAAGAGCTTAAAGGAAAAAAAATCAACATTAAAATCGCAAAATAAATCTC
AAAGTATGCAATGTAGCTCCAATGAATCGAGTTTATGGGATTTAGAAAAT
ATTACTAAGTCTAAGAATGGAAAGAAGATATGTTCCATTGCTTCAAATAA
AAATGTATCACTTTCGAAGTCTCAAAAAAAGCCCAAAGAAAATTATACTC
GCTATGGAGAATCAAGTTTATCAGACTCAGATAGTGAAGATAAATTTACA
TTTTCAAAAAACAATGCATCAGGAACTAAAACTTCTTCTTCTTCTACAAA
GAAGAATGTGCACCTTTCAAAATCTAACAAAATATCCGAGAGAAAGCAAA
TTAGTTCTGATGAATTGAGTTCAGATGAGAACATTGGTGTTGCTCAGCAG
AAAAACTCACAGAAAAAGGGTTTTGAATCTTCAAAGAAAAAAGAAGTATT
AACTTCAAACCCTCCAAAAAGTTCTAAAGAAAATCAAAGTAGTGAATCGA
GTTTGTCGGATTTAGATAGTGAAAAAAGAATAAAATCTTCACAACACATT
AGTCCAGTGATTAAAATATCTTCTTCAAAGAAGAGCGTAATACCAATTAA
GTCTTTGAAGATATCTGAGCGAAAGCAAATTAGTTCTAGTGAATTCAGCA
CATCTGGTTCAGATGGTGAAGGAGATCCTAGTGTTACTCTGCTGGGAACA
ACTTCCAAAAAAGAACCTTTGATGTCTAAAAACAAATCAAAAAAATATAT
AAGTAGCTCCAGTGAATTGAGTTTGTCGGATTCAGATAGAAATGATAATT
TAGTATCTTCGGAAAGCAATAAATCAGCGACTCAAATATCGCCTTCAAAG
AAGAGTGTGGTAGCAATAAAATCTAAGAAGATATCCGAAAGAAAGCAAAT
TAGTTCTAGTGAATCGAGTTTATCAGATACGGACAGCCCAGATTGTATTA
GCATTATTGAAAATAAGAATCAGAAGAAAAAAATATTGCCTTCTAACTCT
ATAAGTGCTCACATAAAGAACAAAAATGGTAATAATGAATTGAGTTATTC
AAGCTCTGGTGGTCTAAAACGTACTATGTCTACTAAAAAGAATAATTCAT
TGTTAAAATTATCTGATGCATCGTCGAAAGAAAAGTTATTGCTTGCGGGA
AAGAGTTGTAAAAACATAAAGGATACTTCGAACCCCATCTTTAATCCTTT
GAAGCGAAAATTTATTGACGGGTTTGTTTCATCTTGCAAGAAGAAAATCA
ATGTTCCGATTTCTAAAGTAATATCTAAAGCCATAATTACAACCTCTGAT
TCTAGTAACTCGGATATTGATAATTCTAAATCAGAAGTATCTCAAACATC
CATTAATATTTCTTCTGCGAAGAATAAGTCCAAAATTGAGAAGGAAATAA
TTTATTTGGGCTCGAAAATATCTAAAAGTAAGTGTCGCTCGAGAAAAAAT
ATTCCAGTATTAAAGGAAACATCCTCTATTGGCATAATAAGTCATAAGTC
TAAAAAAAGAAAAAGGGAACTTGATTCAACTCCATATTTAGTATTTAAAA
GGACTAAGTCAATTCAGAACGAAATTTTAAGAACGCATGCTGAATCAATG
AATTTGTCATCATTCAAATCTAAAAGTGTTAGTAATTTAAATATATTGAA
TAGTTCAAACGTCCATCAAATGAGTGAAACTGATAGAACGATACAAGATG
ACTCACAGGACAACCCATTAGGATATAGCGAACTAGTAATGGGAGTGAGT
AAAAAGGCTAGAAAAGTTGTCAAAAGTAGTAAAAATCCAGTTTTTCTTCG
ATGTGATAACGGAAAGGACCTTGATCATTATTTTGATCATATTCCTCCTC
CTCAAGAAGAGGTCGCAACCGTTTCTAATTTCCTTCCATTTGAATCAAGT
GTGAATCAAGATGATATTGACTTAAATGTTGGTGGTCAAAAAAACTGGGA
ACTTCTACTTCAAGGTAAATCTATTCCTGGAAATGATTTTTGGGAAGATA
TCCTAAATGATGATGAGTGTCAAATAAATAATGATAATTTTTCATTTGTT
GAGCCCTCCTCTAACTCGTCTTTATACAAAGTATATGGGGAGCTAAAATT
CTTGGGAGACATGGATGTTAGCAAGAGGGTTATTGGTTGGATTTTGGAGG
AATATAAACTATTGAGAATATCTCCATTGAATGTATTTTGTCCTATTAAT
TTACGACTTTCCCCCCAAGCAATGCAACTTGTTACCTTAAGATTTCCACT
TTTAAGAACTGGTCGACTTGATAAAGAAGAAATGTTTATTGTTCGCCAAA
ATCTCAAAAAACTTATGATCAATCTGAAATTATCACCTGAAGACGTTAGA
AAGTTAATGAAGGAACTTATGATCGGTAATTCTAGGAATGTAAAAGCAAG
ATATTACCTTGCTTGTTTTGCTGGACAAGGCATTCTTGACAGGAGACTCA
GTTATGAAATTTTTAGATGGATTGCCTCTTTCACGGTTGCAAGTAGTAAA
CGTCTTACTGAAACGGAATTGGAATTATTAAAAACAAACGTGAATAAATT
GAAAGGGATTCTAAGATATAAAAGGGCCATAGACATATGTAAATTTCAGG
ATGTTATCACGGGAGGTCAATTAAGATCTTTAATGAACTCCAAAAATGTG
AAAGAATCAAATTATATGTGGTCAACAAGCGATGTATTGTCTTTATTACG
ATATGTTTTTAAAAACTATCCTATCAAAAATGCAATTGAAGCGGAGAAGA
CCAAATTTGATTTTCCGCAAATAGCCAAGGAAACTGGATTTAAGATTCAT
ACTCTACGAAACCAATTGCTATCACTTTTAACTCTACTTGTTAATCATGA
AAAGGGAATATGTTGGACAGAACATGACAGGATTAGAGTTATCGAATATA
TAATGAATAACCCCAAGAAATACTCGTGTATCTCTGATATAAATTGGAGA
GAAATCCGGAAGAAGCATTTTCCCAGTGCATCATTGATTAGTTTGCAATA
TACTTTTAAAAAGACGAATGCTAGATTAAACCTGGGTCAAAGGTGCTTGC
AAGCGCATCGTTATTTTACCTCATCTAATAGAAAAGAACGCTATGATACA
AAATATATTATTGATTACTATGAACAATTGAAAGATTTGTATAAGGACAG
ATAGGACTATACTAAATATTATATTTATGTTTCTATTCATGTCTTGTTTA
ATTATTTGTCTACATACTACATCAATAAAAGCCTTCCATAATTATGAATA
AAAGTTTCAAAAGAGATGCTGGTAGTCACTGTCTAATTATTTTCTAAGGG
TATCCTTGACTCATAGGAAAAGTTGTTGGAGTAAATCAGTCACAACTTGT
ATATTTGCATATATAGTACTGGTGGTGATTTATGGATCTTACTTCTTTTG
ATCAAGACAACTTGGATGATGTTATTGTACTAATTCAAGTGGCTTKTGTT
GTTGTCATTATGACTGGCATTCTCTTATCGATATTTATAATTTGCACTTG
CATTGTATACTTTCAAAAGAGGGAAAGTGGATTGCTCTACTTGGAAGAGA
AAAACATTTCCATTCCAGCAAACTCATTGGACTGCCGTCAAGGGTAATCC
ATCATGTAAAGTAGAATAACTAATCTTTTGTGGATATTATTTGMCAGCCA
TGTCTCTCTACACATTAACTATTTACTCCTCAAGATATGATAATTATTTG
TCTGTTAGGTTGGGGCAGATGAAATATTGAGGTACTTGGATTGAGGGGTG
TTTTTTTAATGTTGATTTTACCTTGAGAAACTTGACAAATGACTTCAATA
ACCCAAATTTATGCTTTTGTGCCCTACAAAAAGCAACAATTTATATAGAG
ATGGATTCACTTTACGGCAAACTATGATTTTTATCTTTCTAATCCTAAAT
GCGGAATCTATTAGACTTCCAAAGAAAATGTCATTTTTGTCCTTTTTTTT
TTGTAGTTATAAGTAATTATTTCTGAAGCAGAAGAATATACAAATTTAAA
AAAATAAAAATGGTGCCCCTCATATAACACATTTATCTTTGCCAGCAGCC
CTGTTCACGCTCAAACCAGCAGCCCTCGTTGCCCCCTAAAAAAATTAAAT
TAAATTAAAAATACAATAAACTAAATCTCAATCTATAAGCTTCAAATTTG
AAATTTGGTGTAGAGTATTAAATATGTACAAATACTCGTATATGTCTTAA
GAGCCTGAGTAATAATTTCACCGCTCTCCCATGTATATGGGCGTTTAAAT
TTAAATGTACCATTTTAAGATATTATTACAATAAATGTAAAAATATGTAC
GGGTTTTATTGTTATAAATATATAATTAAATAATCTTTATCAACGCTTCT
CAAATAACATCCCCAAAAATTATTCTTTTGAAGTCCTCGGGCAAAAAACT
CAAATCCACACAAAAATCAAAACGTATGGACAGCGACGAGTAGCAGCAAA
CATCAGTCGAAATCTAACATCCCCATACTTCCTTTAGCTCCGAGAAGCGA
AGACAGCTATCTACCCCCACCAACCATTCATATAACAAGCGACAACTTTC
ATCATCAACCCTTCAATGATAATCACTTTTTGGATGTATGTAATGGTAAG
TTCCTATTTAATTAATTTATAAAAATATTTTGAACCTATCAATAACGTTA
TTATCTTATCTAGACGGAATCAGTTTGAACAGATCTCTATCCATGTTTGA
AGAAACTCCTAGTACATTTTACGATCGAAGAAGATCCTCCTTTGACTTTA
CTCAGGTTATTCCCAGGAATAATAACATGAAAAAAAGAATATTCAGTGGA
TCAGAATTGAGTATTACCAACCACATCATTCCACATTCCTAG back to top
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