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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s142 | supercontig | LSalAtl2s142:1095544..1100273 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002257 >EMLSAP00000002257 ID=EMLSAP00000002257|Name=EMLSAP00000002257|organism=Lepeophtheirus salmonis|type=polypeptide|length=886bp
MSADCKSPWSDEKPMSGGEEEEEEEEKTLGQEACADHQDEEVEEKSLSRR
RSSSKSWKELKKAVVATRKRLSSGSRSGNLPSSFLFRDLEPQKTRLYFLA
HPNIGYVDVGQTDQLLPWSLLIEASSQTLPSCTGKLSKEELLLSETKRCA
TWGINSFQMDSKSGKIIFPSCGSLFGCVDSGKPPVSPLYPFEIKKRKVQG
AILNASMCPANPDLIASVINGDIWIIHAVSGDEVRVTFYHKGNESLEDDP
LTCGIPAYVTQEEFERFEGFWWCPVCEDGDYQILYEVVDESDVELLRSSS
GECIEELRFPRAGTSNAKSYLKLLKFKLQNDEEVVDVRHYGLENSLENLF
PWMEYLVRAGWMSDGKSVWIQLLNRRQVLIELVMLPQKLFVPVQIDMECV
TLTNGASPHPPSGQVQILCSLQSETWIKVNDILTFLTSSDLEDDRYHTLK
FIWASEETGWRHLYLYTVQLTNSSDAANSDIFEEMCLRQRIISKVALTFG
EWSVDNKAITVDSEKGLVFFQANKDTPLENHLYVVSLSQPGHIRRLTTLG
YSHNVYIREDCSLCVTLFSSIHSVPGCQIFRLVRKDSTVDGISMIPSGTL
LEPKTPEKDYHPPQLFSHKISSGDTLYSMIFKPHTLEDDRQYPIVLNIYG
GPEVQLVSNAYKGMYQLRNHLLASQGYGVICIDSRGSKNRGTKMESHIHH
RMGQVELADQIEIIHKLHETEKWMDIHRIAITGWSYGGYLSLMGLAKYPD
LFKIAIAGAPVTSWNEYDTGYTERYMDLPSLNPSGYRKGSILNLVERFPD
EPNRLLIVHGLMDENVHFHHHTAQLITQLVKYGKPHQIQVYPGERHSLRY
IEASAEDATSVCISESSDEETLTKELLINVAGPEAA back to topmRNA from alignment at LSalAtl2s142:1095544..1100273- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002257-698104 ID=EMLSAT00000002257-698104|Name=EMLSAT00000002257|organism=Lepeophtheirus salmonis|type=mRNA|length=4730bp|location=Sequence derived from alignment at LSalAtl2s142:1095544..1100273- (Lepeophtheirus salmonis)
ATGAGTGCGGATTGCAAGAGCCCTTGGTCTGACGAGAAGCCCATGTCCGG
GGGTGAGGAGGAGGAGGAGGAAGAAGAAAAGACTCTAGGACAAGAGGCAT
GTGCTGACCACCAGGATGAAGAGGTTGAAGAGAAGAGCCTGAGTAGAAGG
AGGAGCAGCAGCAAGAGTTGGAAGGAATTGAAAAAGGCCGTAGTTGCTAC
TCGGAAGAGACTTTCCTCCGGTTCCCGAAGTGGCAACCTACCCTCCTCCT
TCCTTTTTCGGGATCTCGAACCTCAAAAAACTAGACTTTATTTCCTGGCA
CATCCCAACATTGGATATGTGGACGTGGGACAGACGGACCAGCTATTGCC
ATGGAGTCTTCTCATTGAAGCCTCTTCCCAGGTCCGCTCTTTCTCTTTTC
AGGCTTTTCTTACAAATACATATTCTGTATCACAATTTGAGCATGGCTTC
CTCTTCACTCTTTTTGCTTCATCCCAAAAAAAAAAATCATGGGATACCAT
TTTCATTATTCTTAATCATGCAACTGTTGCACATGTTTGCTCTTTCATTT
CAAGGATGCGATCATTTATATTTCAAATATATTACGTTTCATTCTTCAGA
CAAGGAGTAATTTATCTTAATTGAACAACTCACTATAAATATACAGTCAA
TTAGTATAATGACATGTTAGTACATAGTAAAATTTAATATCAAAAGGCAT
AGATAGATCGCCAAAATAATCTAAAAGAAATTACTTTTTATTTGGGAAAA
AAGCAATAACGTAGAGACTGATCTAAGTTTGGAGATTTAAATCTTCTCAT
GCTCCGAATATATGTTCACCTATTTAAAATATTTAACTTCAAAATATTTA
TACATTCATATTACTTTATTAGACTCTTCCTTCCTGCACTGGAAAGCTTT
CGAAGGAAGAACTTTTATTGTCAGAGACAAAAAGGTGTGCCACTTGGGGT
ATAAACTCTTTTCAAATGGACTCTAAATCTGGTAAAATTATTTTCCCATC
ATGTGGTTCACTTTTTGGATGTGTCGATAGTGGCAAGCCTCCTGTTTCTC
CTTTGTATCCATTTGAAATTAAAAAAAGAAAAGTCCAAGGAGCCATTCTA
AATGCATCTATGTGTCCTGCCAATCCTGATTTGATAGCTTCTGTCATAAA
TGGAGATATTTGGATTATTCATGCAGTATCTGGTATATTCACTGCGTTTG
GAGATTCTCAGTTGAAATTTCATCTATTTTTATTATCATCGTCTAGGTGA
CGAAGTGAGAGTGACGTTTTATCACAAGGGCAATGAATCTTTAGAAGATG
ATCCCCTCACATGTGGTATTCCTGCTTATGTCACTCAAGAAGAGTTTGAA
AGATTTGAAGGCTTTTGGTGGTGTCCTGTCTGTGAAGGTAAACCTTCAAT
ATATCTTGAAATGTACGTTACTAAATGTAATTCTTTCTTTTAGATGGAGA
TTATCAGATACTATACGAAGTTGTAGATGAAAGTGATGTTGAGCTACTGC
GCTCTTCTAGCGGTGAATGCATTGAAGAGCTCCGATTTCCTCGTGCTGGG
ACAAGCAATGCCAAGTCCTACTTGAAATTACTTAAATTTAAATTGCAGAA
CGATGAAGAAGTTGTAGACGTTAGACATTATGGACTTGAGAATAGTCTTG
AAAATCTTTTTCCATGGATGGAATACTTAGTTCGCGCAGGTTGGATGTCA
GATGGAAAAAGGTATGAATTCTTGGGAGTATACTTTTAATTTACAATTTT
CCTTACTATTTAATGTTAGCAACTTTTTAATTTAAATGATTGAAACTACC
ATTTTAGCATCTATAAATATCTTTGAATGATCACTTTTGTTTTAGAAATC
AAATGCATCATTGTGCTAGGAATGTCAATAATAATAATTATTATATATCA
TATGAAAACAGTAAATGATGAGTTGGATAATGTTTTTACGGGTGAAAATA
ATACATGTATTTGACATTTTCAGTGTCTGGATCCAACTATTGAATCGAAG
ACAAGTCTTGATTGAGCTAGTCATGTTACCTCAAAAACTTTTTGTTCCTG
TACAAATTGACATGGAATGCGTTACCTTAACGAATGGTGCGTCTCCTCAT
CCTCCTTCAGGACAAGTTCAAGTAATTTGTGAAATTATTATTATTATTGT
ACTTAATGATTGACTTTTTTTTAATTGTTAGATTTTATGTTCACTTCAAT
CTGAAACGTGGATTAAGGTCAATGATATTCTAACATTTTTAACTTCTTCG
GACCTTGAAGACGATCGTTATCATACATTAAAGTTTATTTGGGCATCTGA
AGAAACCGGCTGGAGACATTTATATTTATACACTGTACAATTGACTAATT
CATCTGATGCTGCCAATTCTGATATTTTTGAAGAGAGTAAGTTTATGAAT
TCATTTAATTAACTCTCAACTTCAAGATTATTTTGAATAAATTAGTGTGT
TTGCGACAAAGGATCATAAGTAAGGTAGCTCTGACGTTTGGAGAATGGTC
TGTAGATAACAAAGCCATAACAGTGGATTCGGAAAAAGGCCTTGTATTTT
TTCAGGCCAATAAAGACACACCACTTGAGAATCATCTCTATGTTGTATCA
TTATCTCAGCCTGGTCATATTAGAAGACTAACCACTCTTGGTTACTCGCA
TAACGTTTATATACGAGAGGTAAATGACGTTGTTTGATTGAAAACAAACT
TACTTATATAAAGATTTGTTATTTCTTAAGGATTGTTCACTGTGTGTGAC
CCTTTTTAGCAGTATTCATTCAGTACCTGGTTGTCAAATTTTTAGGCTAG
TTCGGAAGGACTCAACAGTGGATGGAATAAGTATGATTCCGTCTGGGACG
TTGCTCGAGCCAAAAAGTAATAATTATAAATATTTTAAGTGTCATTAAAT
ATGTAATTTCCATAATCTATTATAGCTCCTGAGAAAGATTATCATCCACC
TCAGCTCTTTAGTCATAAAATATCTAGTGGTGACACATTATATAGTAAGA
ATACATATTACTTCTATATATTGAATCTATTTGAACTTCACATACTTTTA
GGCATGATCTTTAAGCCTCATACATTGGAAGATGATAGACAATATCCAAT
AGTTTTGAACATATATGGGGGTCCTGAAGTTCAACTAGTCTCTAATGCGT
ATAAGGGGATGTATCAACTGCGGAATCACCTCCTGGCATCTCAGGGATAT
GGTGTCATCTGTATTGATTCCAGGGGGTCAAAAAATCGTGGTACTAAAAT
GGAATCTCATATTCATCATCGTATGGGGCAGGTTGAACTAGCTGATCAAA
TAGAAATTATACACAAACTTCACGAAACTGAGAAATGGATGGATATACAT
AGGATTGCTATTACTGGTTGGTCTTACGGGGGTTACTTATCTCTTATGGG
TCTAGCAAAATACCCAGATTTGTTTAAAATCGCAATTGCCGGTGCACCAG
TTACTTCCTGGAATGAATATGACACGGGTTATACCGAACGATATATGGAT
CTTCCATCCCTTAACCCATCTGGATACCGTAAAGGATCCATTTTAAACCT
AGTGGAGAGATTTCCAGATGAGTAAGTTTGTTCAGAAGTATTACTTGTTA
TTGATTTCTCATTATTTTGCAGGCCCAACAGACTTTTGATTGTCCATGGT
TTAATGGATGAAAATGTACATTTTCATCACCACACTGCACAATTGATTAC
TCAATTAGTAAAATATGGCAAACCTCACCAGATTCAGGTGAAATATTTGA
AGAAATATATATATTTGTTACTTTTTTATGTTTTATTTTTGTTGAAAGGT
TTATCCTGGAGAAAGACACAGTTTGAGATACATAGAGGCCAGTGAGCATT
ACGAAACAATGCTTTTGTCATTTTTACAATTAAATCTGTGATTTTCTGTC
ATTTCAACGGATTTTAAGTCCCATAGAAAGATAAGATGATTTTATTTTAT
CTTTGGTACGTAGATGAGAAAAAGTGCATCTTAAATTCATATAATATTTT
GGTGAAAAACGCATATCTAACAAGTTATCGCTTTCAAAATTATAAATAAA
TATAACTAGACAAAACTTATATATTTTATATGAAAATATAGTTATTAGAT
TGAAAATTGAAGCTCTACAATATACAATTCTTATTATCATTTTATAAACT
CATAGATTAAATCCTAACCTGATTACATGAGGAATTATTCTTTATTTAGA
CTGTAGTCAACAATTAACTATCAATAAATATTTCAAAAAATAAAATAGCC
ACTTTTTAATTATTTTTGTAAACATGAACTTTATTTCCGATATATATGTA
ATATATTCAGACACGAAATATCCCCTAATTTAAAATTGCCGTAGTACAAG
TTAAATAACTATTTGAGGGATGATTTATAAAGAGTTCGGCACAAAAAAAG
AAAGTAAACAGATAAATCTATTCAACAATCAATATCCAAGTATATTTACG
GTCTTCTACTAGGACAGTAGCATTAGCATGATTAAAAAATAGGAGAAGAT
GTAACTAATTTGTAAAAATAATTCAAGGGATTTACCTTAAATGAAAACGT
TATGATTATAAATTAGACAGTTTCTTAATAATTCAAGTAATGATTTGCAA
CCATTAATTTCATTGCATTAAAGTTTAAGGTGCAGAGGATGCCACGAGTG
TTTGTATTTCAGAGAGCTCCGATGAGGAAACGTTAACCAAGGAACTACTT
ATTAATGTGGCCGGCCCCGAGGCAGCCTGA back to top
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