EMLSAT00000002261, EMLSAT00000002261-698108 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002261
Unique NameEMLSAT00000002261-698108
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s142supercontigLSalAtl2s142:1363161..1364746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002261 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002261EMLSAG00000002261-685027Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010009EMLSAE00000010009-718937Lepeophtheirus salmonisexon
EMLSAE00000010010EMLSAE00000010010-718938Lepeophtheirus salmonisexon
EMLSAE00000010011EMLSAE00000010011-718939Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780688auto780688Lepeophtheirus salmonispolypeptide
EMLSAP00000002261EMLSAP00000002261Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002261

>EMLSAP00000002261 ID=EMLSAP00000002261|Name=EMLSAP00000002261|organism=Lepeophtheirus salmonis|type=polypeptide|length=414bp
NVEDNYSLSWTNRYTIIPVVDIHSTRPTGTSTTTPYNRMYATAGFTPPSP
TPKAQPSLLNLFDNIYPTSPQIYKSAPSSPVNNRHDSYLLNNNNIDGSKK
KPTSPEPSRRAYLTLDKLERGNLLSEKPSAASTPLISGCCGGVMKDLHSS
CPAKKKSSEKSSLHKRRSGSYSALDSVSTDSSDGIDGSIPAQPSGSSSAG
NCVKNIVSWMSKVGKGTSALLDSLPSAFKGEDHHVVMVGLDSAGKTTVLY
RLKFDQYINTVPTIGFNCEKIRGTLGDSRGLVFLVWDVGGQEKIRPLWRP
YTRATDGIIFVVDSTDTGDRLDEAKMELHRIMKTQDNVGVPLLVIANKQD
LPTSKSAPELERILELSKIGNSSLWYLEPCCAVTGEGLDIAIEKLHELIV
KRRKIQKRIRNKTR
back to top

mRNA from alignment at LSalAtl2s142:1363161..1364746-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002261-698108 ID=EMLSAT00000002261-698108|Name=EMLSAT00000002261|organism=Lepeophtheirus salmonis|type=mRNA|length=1586bp|location=Sequence derived from alignment at LSalAtl2s142:1363161..1364746- (Lepeophtheirus salmonis)
AATGTAGAAGATAATTATTCATTATCATGGACGAACAGATACACAATCAT TCCAGTGGTGGACATACACAGCACCAGACCTACTGGAACATCAACAACTA CTCCATACAACAGAATGTATGCTACTGCCGGGTTCACTCCGCCCTCCCCT ACTCCCAAAGCTCAACCCTCGCTCCTCAATTTATTCGACAATATCGTACG ATAGAGCCGAACTACAGTAATCGAGGCATTGTGCCAGAGACGGGCATTCT CTCCKCTCCTCCCTCACGAAGACACAAAAGCAATAATAGCACTGGAGGGA GCAGTAACAATACGAGCTTTAGCAGTAGTAGCAGCAGCAGTGGGAATAGC AGTATGCTGCTAAATACCTCCAACAATAGCTGCAAATCCTCTGCATCTAA ATCCTCTGGACATCGTCACCGAAGCAAGTTCCGAAAAGATCATCACCATC ATTACCACAATCATCCTCATCACCAGTACCCCACATCACCTCAAATCTAC AAATCAGCTCCCTCTAGTCCTGTCAATAACCGACATGACTCCTACCTTCT CAACAATAACAACATTGATGGAAGTAAAAAGAAGCCCACCTCTCCAGAGC CATCTCGAAGGGCCTATCTCACTCTAGACAAGCTGGAACGTGGAAATCTC TTATCTGAAAAGCCCTCAGCTGCCTCGACTCCTCTCATTTCTGGATGCTG TGGAGGTGTCATGAAGGATCTCCACTCCTCCTGTCCTGCCAAAAAGAAAT CCTCAGAAAAATCATCTCTTCACAAAAGACGCTCAGGGAGCTACTCTGCT CTGGACTCTGTGTCCACGGATAGCTCAGATGGAATTGATGGCTCCATTCC TGCTCAACCCTCCGGCTCTTCGTCTGCTGGAAATTGCGTCAAAAATATTG TATCATGGATGTCAAAAGTGGGGAAGGGCACCTCAGCCCTTTTGGATAGT CTCCCCTCTGCATTCAAGGGAGAGGATCATCACGTAGTAATGGTTGGGCT GGACTCGGCTGGAAAGACCACGGTTCTCTATAGGCTCAAATTTGATCAGT ACATCAACACCGTTCCCACCATCGGATTCAACTGTGAGAAAATCCGAGGA ACACTGGGTGACTCAAGGGGCCTCGTATTTCTCGTTTGGGATGTAGGGGG ACAGGAAAAGATTCGACCTCTTTGGAGGCCTTACACTAGGGCCACAGATG GGATCATTTTTGTTGTGGATTCTACAGACACGGGTGATCGTCTAGATGAA GCCAAGATGGAACTTCATCGTATCATGAAGACTCAGGACAATGTGGGGGT TCCTCTTCTCGTCATAGCTAACAAACAGGTAAGCTCAAAACTCCCTGTTT CCTTTGCGTTATTTTAATCTCTTTCATTCCTTGTTTAGGATCTGCCTACA TCCAAATCTGCACCAGAATTAGAACGAATCCTGGAGCTATCAAAAATAGG GAATTCCTCACTATGGTATTTGGAGCCTTGTTGTGCTGTAACAGGAGAGG GGTTGGATATAGCAATTGAAAAACTCCATGAACTCATTGTGAAGAGACGA AAAATTCAAAAACGCATTCGGAACAAGACTCGATAA
back to top
Add to Basket