EMLSAT00000002263, EMLSAT00000002263-698110 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002263
Unique NameEMLSAT00000002263-698110
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s142supercontigLSalAtl2s142:1430961..1432420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002263 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002263EMLSAG00000002263-685029Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010016EMLSAE00000010016-718944Lepeophtheirus salmonisexon
EMLSAE00000010017EMLSAE00000010017-718945Lepeophtheirus salmonisexon
EMLSAE00000010018EMLSAE00000010018-718946Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780745auto780745Lepeophtheirus salmonispolypeptide
EMLSAP00000002263EMLSAP00000002263Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002263

>EMLSAP00000002263 ID=EMLSAP00000002263|Name=EMLSAP00000002263|organism=Lepeophtheirus salmonis|type=polypeptide|length=254bp
MSWLXSFAIGISSWSSVNTIIFLLIGDLMTQERILRRFNVNRSQGLDIVN
KSISSLFAIGSSVIGSYIILYSEGWSYMTQVWTGGYFLYDLYAMYKVVHS
EGKSFSYFLKTKALLVAHHLAIVLLFIPVMSDIQDHPGQNLMIGLAFLME
LSTPFVSLRSILHTLGKKNTXAYVINGILMTLIFFYCRVANYIYILHALK
NVVNADSIFQVFFYHTPTRCKIWFTITXLPQLYWWSLMIKGAVHTIKGWH
HHAH
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mRNA from alignment at LSalAtl2s142:1430961..1432420-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002263-698110 ID=EMLSAT00000002263-698110|Name=EMLSAT00000002263|organism=Lepeophtheirus salmonis|type=mRNA|length=1460bp|location=Sequence derived from alignment at LSalAtl2s142:1430961..1432420- (Lepeophtheirus salmonis)
TTTAACGGATCATTGGGTTCTAAAAGTATGTCATGGCTTMTGAGCTTTGC
CATTGGGATCAGCTCCTGGTCAAGTGTGAATACAATCATTTTTCTGTTGA
TCGGAGATTTAATGACACAAGAGCGGATTCTACGTCGATTCAATGTGAAT
CGATCCCAGGGCCTGGATATAGTTAATAAGTCCATATCATCGTTATTCGC
TATAGGTAATAAATAAAGTGATATATATTTATTTATAGGGTTGCCTCATG
CGTTAGGCGTTTGGAGTTTTTCAATTTTCAGGGCTTAGATAAAGTTACTA
CGGGTTTAAAGTTTAAGGAATTTTTACTTTTTGATACTCTGTTCACATCA
AAGTCCTCAAAATTCAAATTTATTTAAGATTTAATTTTAATCTTAGAAGG
TTGGTTCAACTTGGGTATATTATACCTTTATTTATTTATGTATTTTTTGG
CTAAATTTGAAATATTGGGGCCATAGATTGAATGAATGAGATAAACGTTC
TATTCCTTAGGTATTTTTAATTGTACTTGTTCAATGTGTATAGAGATCAT
ACTTCATAATTGCTTTATCTTATCTGGAGAAACTGGAAATTTTCTTTACA
TGAGTACTTACTTACAGGATCATCTGTGATTGGGAGTTATATTATTTTGT
ATTCGGAAGGATGGTCCTATATGACTCAAGTATGGACTGGAGGTTATTTT
TTGTACGATTTGTACGCAATGTATAAAGTGGTTCATTCCGAGGGCAAAAG
TTTTTCATATTTTCTTAAAACAAAAGCTCTCCTTGTGGCACATCACTTGG
CAATTGTTCTACTTTTTATACCTGTTATGTCGGATATCCAAGATCATCCT
GGTCAAAATTTAATGATCGGCCTCGCTTTTTTAATGGAGCTCTCTACTCC
ATTTGTATCTCTAAGATCCATTCTTCACACTCTGGGTAATTTTTATTTCC
TATATTGATATTGATTTAAAAATGAAGTTATTTTTTTAATATTCAAAATG
AATTATTGAGCACCTTTACAATACATATTTATGTATCATGTTTATGCATC
ATTTAATAAATAAGGAAACTTAAAGATGTATTACCATTCTTTATTATAAA
TGATGGTAATTCTTATCAATGCTTACGTCTATTCTTAAAAAAAACTGCCT
GAATTTCTTAAAACAAGTTCACGTCTTTATACTCATTTCAGGAAAGAAAA
ACACGKCCGCCTACGTGATCAATGGCATTCTAATGACTCTGATCTTTTTT
TACTGCCGTGTTGCGAATTATATATACATACTCCACGCTTTGAAAAATGT
CGTCAATGCCGATTCAATATTCCAAGTATTTTTTTACCATACTCCAACGC
GATGTAAAATTTGGTTTACAATTACATTKCTGCCACAACTTTACTGGTGG
AGTCTCATGATTAAAGGTGCAGTCCATACCATAAAGGGTTGGCACCATCA
TGCTCATTGA
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