EMLSAT00000002264, EMLSAT00000002264-698111 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002264
Unique NameEMLSAT00000002264-698111
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s142supercontigLSalAtl2s142:1435913..1437540 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002264 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002264EMLSAG00000002264-685030Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010019EMLSAE00000010019-718947Lepeophtheirus salmonisexon
EMLSAE00000010020EMLSAE00000010020-718948Lepeophtheirus salmonisexon
EMLSAE00000010021EMLSAE00000010021-718949Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780749auto780749Lepeophtheirus salmonispolypeptide
EMLSAP00000002264EMLSAP00000002264Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002264

>EMLSAP00000002264 ID=EMLSAP00000002264|Name=EMLSAP00000002264|organism=Lepeophtheirus salmonis|type=polypeptide|length=169bp
MWXCGRKKGLIREIWAKRSLQLQVEEGKSETYQEEAXAAYFALCSFDRPT
LVSLKSILDPRKGIPRDTCLKLSPDPDTFLLLQTLKFSSRPFAPLKPICS
LNKSRGLRDCPSRDPQQQEDLVFCLNPRHWNFIFLPDIPELPNADSDTDT
VKKILKESNTLSDVSFSLA
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mRNA from alignment at LSalAtl2s142:1435913..1437540+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002264-698111 ID=EMLSAT00000002264-698111|Name=EMLSAT00000002264|organism=Lepeophtheirus salmonis|type=mRNA|length=1628bp|location=Sequence derived from alignment at LSalAtl2s142:1435913..1437540+ (Lepeophtheirus salmonis)
ATGTGGYTTTGCGGMCGAAAAAAGGGTTTGATTCGTGAGATCTGGGCCAA
ACGATCCCTCCAACTGCAAGTGGAAGAGGGGAAGAGTGAGACTTACCAAG
AAGAGGCTGYCGCCGCCTACTTTGCACTCTGCTCCTTTGATCGACCCACT
CTTGTATCTCTCAAATCTATCCTTGATCCTAGGAAAGGAATCCCCCGTGA
CACCTGTCTGAAGCTGTCCCCGGATCCAGATACCTTTCTCCTTCTCCAGA
CTCTCAAGTTCTCATCACGTCCCTTTGCACCACTCAAGCCCATCTGCTCT
TTAAACAAAAGTAGAGGACTGAGGGATTGCCCTTCAAGAGATCCACAGCA
ACAAGAGGACCTGGTCTTTTGTCTCAATCCCCGTCATTGGAATTTCATCT
TTCTACCTGGTAGGGATCGGGTTTATAATTTATCATCTCTAGCTCAGTGT
ATCATTCATTTGAGTAGTATCATTCTAGTCTTAGTCTCTGGCTTCTCTCT
CCTCGTCTTCTCCTACTTGTTTTTAGACTTACATACATCTTCTTATTTAT
GTCTTATGATAATTTTTGTCTTGGCGCCTTACAGACCCACCTTATCCATA
CGAATTTTCATATCTTGCAAAAATGAGTACATATCTCTGTCTCTTTAAAT
GAACTTGATTTTATATTTATACATATATATGTATGTTTGATAAAGAAGGA
AGAAAATGTGTCTTAATATGAAAGAAAAAATTTAATTTTTTTTCTCTCTC
CCCTGACATGAGATTGTTTAAAAGTCATGCTTTGAAGTGATTTAATAAGA
ATAGCTTATTCTTCTTATTATTGATATCTAATGAACAAACAACTTTGCTT
TACTATATATAAAAGATTGTAGTAGGAATAAGCATGTTTTCCTTTACGAT
AATGATGTCAAACTATGCTGAACTGACGGCAATTCCATCATTTTATTAGA
TGCCACAAGTTTCTTAACATCTCTTATTGATAAATGTATTTTTATTACTC
ATTTTTCATTTCTTGTCTTAATTAAATAACATGCGCATGTACCTTTGTAC
ATAAATCAAATAAGTAGTATTTTTAGACACAAGTCAGTAATGTGTACTTA
AACATATATTCTATAAATAAAAAGTAAAATGGACTCTTGAATGACCCTCG
TGGACATTTCATTTGCTACATTTTAGCAGAAGGGATTTTTTATTTTTTAT
TTCGACTCATTAAAGTGGATCAACTTCTTGTTGAATAAGTCATGATTGTC
GTCTATCTCCGTTAGTATACATAGCTACATTAAAATACATTAAGGAAGTG
GGATTTAAGTATATGTATATTGTTCAAATTTGTGGTTCCTTCAATATTTG
AAACTTTTGAGGATAGATTTATTCCCCATTTCTCTTTTAATTTAAAGGAA
TGGCACGGCCTTTCTCTCTGTATGGCTCCAATATATTCATACTTCTTACA
CTTTTCCTTTTTTTATTTTCAGATATCCCCGAACTTCCGAATGCCGACTC
TGACACGGATACAGTTAAAAGTAAGTCCATAAAATCCAAATGAAAAATTT
ATCAACACACAAGCCCTTTATTTTCCAGAAATCCTTAAAGAATCAAATAC
ATTGTCAGATGTTAGCTTCTCGCTTGCG
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