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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1434 | supercontig | LSalAtl2s1434:40764..46845 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002298 >EMLSAP00000002298 ID=EMLSAP00000002298|Name=EMLSAP00000002298|organism=Lepeophtheirus salmonis|type=polypeptide|length=1024bp
MKLLKPSWIAKEGQPIFSIDIHPDGTRFVTGGQGNDSSGRISIWNMKYIK
EHGRVESSTSPKLLSQMDHHLGCVNTVRWSHSGRFLASGGDDKIVMIWEQ
SNLQQSSNLLGGANVEYWKCKFTLRRHDGDILDLAWSVRDNFIATASVDN
SIIIWNADKLPEVIKILKGHTGLVKGVIFDPVGKYLASQSDDKTLRLWRT
SDWEVDSVITEPFLECGATTHFLRPGWSPDGSLLVSAHAMNGGGPTAQMI
DRQGWKKSRDFVGHKKAVSCVRFHNQIFQREGQSDSYVTVALGSRDRGFS
VWCTNLKRPYFVVNDIFDQSVLDISWWKNILVACSMDGSIAACVLDEKEL
GVAISDSKTYEFMTNRYGKSFGTKPKSQQNGTSLIAENPEALGFNDDENS
SCKDSIKVNGVSSIPQFVKPKGPTDKQIEARTLDGKRRITPVFIPEFGEP
LGTGEFGSASSRERSKIPVEKRDDIVTPNVSPVKSSNDSSSTENKIQPVI
KPSLTPPQEPPVNIIAVKKKPKNSSSDVKSIPVKKKPSSVAPTPPQSVTS
KTSEPLDSSSITSSTGTSSSSSDSKDVPPSQTSKTLTKEDKLKDAKLRKP
ELVSKRKLPENGDDDDEDAPLHRPKRRRLRPFDDDDDDEEEVGIDRCTSS
YPTLKHHRNSYRLPPLNAQSRCHVYTFPDDNQACVTNDYSLSKIHHLRYK
SQHCEWETLFTSPIMSVLRSQNFVIAATCDGCIHVFSPYDVGSSAHRLLP
PLVLPSPISKIAGGKNEKLALITVDAGFYLWDLSQESPRIIMKNEXLXPI
VSPDASVSKLSFLPPREEPIIITSDGKSFCYNTSLGAWLKLTDGNDGIKE
ISGYRGTSTLNGNCSLPLVDLDRQTEVRCNGKSNFLLSNGKQRNEEEEEK
MKYLASITHCESQRCTAQYLSSCEEYKYWLLAEIRHLSSNRQNKDRELRQ
ILRNLLGPAHSSSDAFSNSSSWNPKVMSINKRDLLKEALKILGGSSNYQK
LFAEFNDQLNSSHDLADASSILNI back to topmRNA from alignment at LSalAtl2s1434:40764..46845+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002298-698145 ID=EMLSAT00000002298-698145|Name=EMLSAT00000002298|organism=Lepeophtheirus salmonis|type=mRNA|length=6082bp|location=Sequence derived from alignment at LSalAtl2s1434:40764..46845+ (Lepeophtheirus salmonis)
TAAATTAGCCATAATTCAAAGGTAAGTGGTTTTACGAATATAGTAAGTAG
ACAATGTTCCCACGTTCGATGGAATCTGTCAACTTTTCCTTCTAAATATT
ATTCAAAGTATGACACCTTATTCTCGAACCAGGGGCGTCAAAGGATTCTA
CTTTGAGGGCCCCTTGGTTTTTGGATTATTTTTTTTTAAATCCAAAAATC
AATTTTTTTTTGAAAAAATAAATTTTAAATGTTAAATTATTTGGAAAAAA
AATTCCAAAAATCTGTAGAGAAAATTAAATTTTTGAATTTTTTTTTTTCA
AAAATCCACATTTGTTCACAGAAAATTTAATTTTCTGGAAAGAAACTTCA
AATATTCAATTTTTTGGAAACACAATTTGATAAATTAGATTTCAAATATA
ACTTTTTTTCAAATTTCAAATATTAAATTTTTTGGAAAAAAATTTCAAAA
ATTAAATTTAAAATTTTTAGAAAAAAAAATTCTAAAAATTAAATTTTCTA
GTAAAAAGGAATAAATCCTTAACTTTCATTATTTTTAAATAGGATCCAGT
TTCAATGGATTTACCTATATTATGTACTTACTTGTATATAGTTTATAGTT
ATATAGTTTTATGAAATGTAGGAAAAAGGATGTAATCATAATTTAAGAAA
TTACTTTGAGCATACATAATTGCCCATAGATTGGCGTGCCTAGCCCATTA
AATGTGGAGAAATTAGAGATAAGTTAAAGAAGAAGAAAAAAATAACTCTA
GCCCTAGGATGAAAGCCATCAAACCTCACGATGATGAAATGCACGCAACG
TAAGCAAGACATCACTACTGTCTATCAGGCAGGAGGAGAGAAAAAACATA
TTATAGTCCTATGTTTGTTAATCATTACAGACAATATTTATTCCATATCA
CCACCACCCTAAAAAATTGTACATTCTGATGGTTCACGTGATCATTACCT
TTGCATTTTTGTAGTAACTGATCTTGGATTACATGCATTCTGGTAATACT
AATTAAATTGAACAAAGAGCTTCATTAAAATATCTATAAGATATAGAGAT
CACTTAGAAATCCCATATAATGCTGAATTACATCTATTGTTTATTTATAT
TATTCCCATATAATGCTGAATTACATCTATTGCTGATTTATATTATTAAC
ATTAACAGATATTAATTGCTACTAGTTAGAAATATGAACTAGTAAGAGCC
AGGACAAAGTTGAGGGATGCAACAGACTGACTAACTTTTGTCGCCACCAT
AATAATTTTGATAATATAAAAAGTGATTTAAGATAAATGGAAGGATGAAG
TGGAAGAAGTAGGTATACTAATCTAATATATATGAATGGCGGSCAGAACT
GGAAGACAATGAATGAACGTAACTAAGGACGCAAGTGTTAGTTAAGTACA
TGGTCGTAATCATTCCTAACAATAATATGGTAGAAGAAAAATGAAGCTAC
AAGAAGAGGATGGCCGAAGTGAATTCTAGCTCTAGCAGCTAAAGGCTAAA
CTGCATGCAGTGAAATAAAAAAAGACTTTCCCAGTTTTTGAATAAGGAGT
TCGAGTCAGAGGAAAGTGTAAGAAAAGACCGTATCATAACTAAGAAAAAC
ACTGGCGCTTGGAGTTACCGAAGAAGAGAGAGAGGATTGATTCTCTGCTT
TGTTTTGAGTCTCATCTGGAGTCCGCCTAAGAGAGAAAGATTCGTGATTT
AGAAGTGAGATTAAGAAGAGAAGAGTTGGTGTGAAGGAAATGAATGGAAG
ATTCAGGATTCCTTGAAAGATGTAGAAGAGAAACAAAATGGCGGCTAAAA
TATGAATAAAAAAAGTAAATAAATAAAGTTCCGTAGACACTATCATGAAA
TTACTGAAACCGAGTTGGATCGCAAAGGAGGGTCAGCCGATTTTTAGCAT
TGATATTCATCCAGATGGAACTCGTTTTGTGACGGGGGGTCAGGGAAATG
ACTCTTCGGGMCGCATCTCCATTTGGAATATGAAATATATAAAGGAGCAC
GGCCGCGTAGAGTCTTCAACTTCCCCTAAACTTTTGAGTCAAATGGACCA
TCATTTGGGTTGTGTGAATACAGTTCGATGGAGTCATTCAGGACGATTCT
TGGCATCCGGTAGAGCATTTATTGATTTATTCTAGGATCCATTAATATTC
TTTCTAACCACTGCTTGTTTTTAGGCGGGGATGATAAAATAGTCATGATT
TGGGAGCAGTCCAATCTTCAGCAAAGCTCGAATCTCTTGGGAGGAGCCAA
TGTGGAATATTGGAAATGTAAATTTACTCTGAGAAGACATGATGGGGATA
TTCTTGACCTTGCATGGTCAGTAAGAGATAATTTTATTGCAACTGCTAGT
GTGGATAATTCCATTATAATATGGAATGCTGATAAGTTGCCAGAAGTAAT
TAAGATACTCAAAGGCCATACGGGACTAGTAAAGGGGGTCATTTTTGATC
CAGTTGGAAAATATTTAGCATCTCAATCTGATGATAAAACATTAAGACTT
TGGAGAACTTCTGATTGGGAAGTTGACTCTGTCATTACTGAACCTTTTTT
AGAATGTGGTGCCACTACGCATTTTCTTAGACCTGGATGGAGTCCTGATG
GGTCTTTATTGGGTAAAAAGAGGAAAATTTGTATCTTTTTGATTTTATAA
TCCTTGTTTTTCAGTATCAGCACATGCCATGAATGGAGGTGGCCCTACCG
CTCAAATGATTGATCGGCAAGGGTGGAAAAAATCTAGAGACTTTGTTGGC
CATAAAAAGGCAGTTTCCTGTGTTCGTTTTCACAATCAGATTTTTCAACG
AGAAGGGCAGTCTGATTCATATGTAACAGTTGCCCTAGGATCAAGAGACC
GTGGGTTTTCAGTATGGTGTACGAATCTCAAGCGACCCTATTTTGTTGTC
AATGACATATTTGATCAAAGTGTTCTCGACATAAGCTGGTGGAAAAATAT
ACTTGTTGCCTGTTCTATGGATGGTTCAATTGCTGCCTGTGTTTTAGATG
AGAAAGAGCTTGGAGTCGCAATCTCGGATTCAAAGACATATGAATTTATG
ACGAATCGATATGGCAAGTCCTTTGGTACGAAACCTAAATCTCAACAAAA
CGGAACATCTCTCATTGCTGAAAATCCTGAAGCTTTGGGATTCAATGACG
ATGAAAATTCATCCTGTAAAGATTCAATTAAAGTGAATGGTGTTTCCTCG
ATACCTCAATTTGTTAAACCAAAAGGRCCCACCGATAAACAAATAGAAGC
ACGTACGCTCGATGGAAAACGAAGGATAACACCTGTCTTCATACCTGAGT
TTGGGGAACCATTGGGGACTGGAGAATTTGGAAGTGCTTCCTCACGCGAA
CGTTCTAAAATCCCTGTTGAGAAACGTGATGATATAGTTACTCCTAATGT
AAGCCCAGTAAAAAGTAGTAATGATTCATCTTCAACAGAAAACAAAATTC
AACCTGTGATCAAACCTTCCCTCACTCCTCCTCAAGAACCACCTGTTAAC
ATAATTGCTGTTAAGAAAAAACCTAAGAACTCATCATCAGATGTAAAATC
CATTCCTGTCAAGAAGAAACCGTCCTCAGTCGCTCCAACGCCTCCTCAAT
CAGTAACTTCTAAAACATCTGAACCTCTCGATTCCTCTTCCATCACTTCT
AGTACTGGCACAAGTAGTAGTAGTAGTGATAGCAAGGATGTKCCACCGTC
TCAAACCAGTAAAACGCTTACCAAAGAAGATAAATTAAAAGACGCCAAAC
TTCGCAAACCGGAGCTTGTATCCAAGAGAAAACTCCCTGAGAACGGCGAT
GATGACGATGAGGATGCCCCTTTACATCGACCTAAGCGCCGAAGACTAAG
ACCTTTTGATGATGACGACGATGATGAAGAAGAGGTTGGAATAGATCGGT
GTACTAGTTCCTATCCAACTCTGAAACATCATCGGAATTCCTATCGTTTA
CCACCCTTAAATGCTCAAAGTCGTTGTCACGTCTATACCTTTCCTGATGA
TAATCAGGCTTGTGTTACTAATGATTATAGTCTATCTAAAATTCATCATT
TAAGGTATAAGAGTCAACACTGTGAATGGGAAACTTTATTCACTTCTCCA
ATAATGTCAGTACTGAGGAGCCAAAATTTTGTGATAGCTGCAACTTGTGA
TGGTTGTATTCACGTATTTAGTCCTTATGATGTTGGAAGTTCTGCTCACC
GCTTATTACCTCCTCTCGTTCTTCCTTCACCAATATCTAAAATTGCCGGG
GGGAAAAACGAAAAACTCGCATTAATTACAGTTGATGCCGGTTTCTACCT
CTGGGATCTTTCCCAAGAATCGCCTAGAATTATTATGAAAAACGAGRCCC
TCATKCCTATTGTCTCTCCCGACGCATCCGTTTCAAAACTGAGTTTTTTA
CCCCCTAGAGAAGAGCCTATTATTATTACAAGTGATGGGAAATCGTTTTG
CTATAATACGAGTTTGGGAGCATGGTTAAAATTAACCGATGGAAACGATG
GGATCAAAGAAATATCTGGATATCGTGGAACTTCCACACTAAATGGTAAT
TGTTCCCTGCCACTGGTTGACTTGGATCGCCAAACAGAGGTCCGTTGTAA
TGGTAAAAGTAACTTTTTATTGAGTAATGGAAAACAGAGAAATGAAGAAG
AAGAAGAAAAAATGAAATACCTCGCTTCTATAACCCATTGTGAATCTCAA
CGTTGTACTGCTCAGTATCTTTCTTCCTGTGAGGAATATAAGTACTGGTT
ATTAGCCGAAATAAGACATTTAAGTTCTAACAGACAAAATAAAGATCGAG
AATTGAGGCAAATACTTCGTAATCTTCTCGGACCTGCGCATTCCTCTTCT
GACGCCTTCTCAAATTCGTCATCATGGAACCCCAAAGTAATGAGTATAAA
CAAACGAGACCTATTGAAAGAGGCTCTAAAGATTTTGGGTGGTTCTTCCA
ATTATCAAAAACTTTTCGCTGAATTTAATGATCAGCTCAATTCTTCTCAT
GATTTGGCAGACGCCAGTTCTATCCTAAATATTTGATAATCATGAATATC
CATGCATCTACCGATACAAAATTAACGACGCATCATAAATACGGAAACAA
GTATATTTAATATTGATAAAATATATAATGACTTAGTCAAGCTTTCCCAT
ACAGTTTTCTCAAAAACTTTGTTTGTGCTTCTTTTTCTAGACGCTGTAAT
TCCGCTAGAGTTGGAGCTAATTCGCTCGCATGACCTATGTAACCAGTACC
TACAAAATAAATATGAATATTTTTATGAAATCATAAATATTATGTGTTTA
AGTGTTATAATTACCTAGTTCTTTTCTTTTTGCACCGTATACAACTTTCC
CATCAAATTCGTCAGCCTTTATTCTAATTTCTGTTGAGACTTGTTGAATG
GTTATACCTAGGTGCTCTTCAATATCAGCTAAACATTGAATTTCGTTATA
CCAGATGCAGCAACCACCATTGCTGGTTAAATTCGTATTGTAACATCCTT
TGCCACGTTTTGGACAACCATGATACCAAACTTTTTCCTTCACTGTAGAT
ATTAGAGATATTGCTAGACCCATTCTTTCAGCACGACCCACCCTTCCAAT
TCTATGCACGTAATTTGATTTTTCATCTGGCAAGGTCATGTTAATCATAA
ATGGCAATCCTTTGATGTCTAATCCTCTTGCAGCAACGTCCGTACAAATT
AAGAATTTGACTTCTTTGTTCTAAAACATTTACATAGAAATAACCTCATA
AATAGATAAGTAATATTTTATTTATATTACTTTAAACTTGGCAAGATTTG
ATGTTCTTTCATTTGGGGTTCTATCGGAATGAAGACAAACGCATGAGTAT
GGATTAGCTGAGTTTTTGGATCCTCCGCCAATTTTATTGAAGTGCCGTTC
CAAATTATCACAGTCAACTTTAGTGCGACAAAATATAATACCGTGATCCA
TTTTATGCTCATCAATGGCACGTACACAATATTCCCCTTTAAGCATTTTA
GCAGCTTCTGAAAGTCCCTCTGAAAGGACAAGTTTTTTTTTTGGTTTTCA
TGTGTAAATCTTTTTTTATAAATTATTAAATA back to top
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