EMLSAT00000002307, EMLSAT00000002307-698154 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002307
Unique NameEMLSAT00000002307-698154
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1437supercontigLSalAtl2s1437:29415..30176 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002307 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002307EMLSAG00000002307-685073Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010208EMLSAE00000010208-719136Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769879auto769879Lepeophtheirus salmonispolypeptide
EMLSAP00000002307EMLSAP00000002307Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002307

>EMLSAP00000002307 ID=EMLSAP00000002307|Name=EMLSAP00000002307|organism=Lepeophtheirus salmonis|type=polypeptide|length=253bp
MSEILRDELIVCKLEPELSEIRDGGKSSSPPGGEVNSSNNTEEPLSLLSF
HPLSSPLPDVIPLLDYSSPMDLVYGHEDYDRLLGGASLHHEDDCIESHSS
SSSPITLHHPLKPGRRKRISCTDNNNVNPKKGRRKPISHDELLMQRNXAN
VRERQRTQSLNLAFQNLRQIIPTRPCDKLSKIQTLKLASCYINFLWQILK
ESVELEDNEDLKSVTTKRENLSYAFTLWRMQGEYRDTINSSNTDHEDSLS
IPN
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mRNA from alignment at LSalAtl2s1437:29415..30176+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002307-698154 ID=EMLSAT00000002307-698154|Name=EMLSAT00000002307|organism=Lepeophtheirus salmonis|type=mRNA|length=762bp|location=Sequence derived from alignment at LSalAtl2s1437:29415..30176+ (Lepeophtheirus salmonis)
ATGTCGGAGATTTTAAGAGATGAACTGATTGTATGCAAATTAGAGCCAGA
GTTATCAGAGATCCGTGATGGAGGAAAGTCTTCCTCGCCTCCTGGAGGAG
AAGTAAACTCCTCCAACAATACGGAAGAACCCCTTTCCCTCCTCAGCTTT
CATCCTCTATCATCTCCACTTCCGGATGTGATACCCCTCCTTGACTACAG
CTCACCAATGGATCTCGTCTATGGACATGAAGACTATGATCGACTCTTAG
GAGGAGCTTCACTCCATCATGAAGATGATTGCATTGAATCTCATTCCTCT
TCATCATCTCCAATCACGCTCCATCATCCACTCAAACCCGGACGGCGAAA
ACGTATTTCATGCACGGATAATAACAACGTGAATCCTAAAAAAGGTCGAA
GAAAGCCCATTAGTCACGATGAACTCCTCATGCAAAGGAATMAAGCCAAT
GTAAGAGAACGACAACGGACACAGAGTCTCAATCTTGCTTTTCAAAATCT
AAGACAAATCATTCCAACGAGGCCATGTGACAAATTGAGCAAAATACAGA
CTTTGAAATTAGCCTCCTGCTACATTAATTTCCTTTGGCAAATCCTTAAG
GAGAGTGTGGAGCTTGAGGATAACGAAGATCTCAAGAGTGTCACGACAAA
GAGAGAGAATCTCTCTTATGCCTTTACTCTGTGGAGAATGCAGGGTGAGT
ACAGAGATACCATTAACTCATCCAACACGGATCATGAAGATAGCCTTAGT
ATCCCTAATTAA
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