EMLSAT00000002308, EMLSAT00000002308-698155 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002308
Unique NameEMLSAT00000002308-698155
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1437supercontigLSalAtl2s1437:31472..34409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002308 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002308EMLSAG00000002308-685074Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010209EMLSAE00000010209-719137Lepeophtheirus salmonisexon
EMLSAE00000010210EMLSAE00000010210-719138Lepeophtheirus salmonisexon
EMLSAE00000010211EMLSAE00000010211-719139Lepeophtheirus salmonisexon
EMLSAE00000010212EMLSAE00000010212-719140Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769946auto769946Lepeophtheirus salmonispolypeptide
EMLSAP00000002308EMLSAP00000002308Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002308

>EMLSAP00000002308 ID=EMLSAP00000002308|Name=EMLSAP00000002308|organism=Lepeophtheirus salmonis|type=polypeptide|length=604bp
MAESSTKTPSSSQPRSSWIFHILWAIGCVFLGVAVNRFDYNYIQNEKSSN
TLPPKEEESLVYTQKTFLVDELHPNPRIRGIDESTNLTNWPPGHMGLGVE
VSRMDFKTKAKKNKMYQQHAFEEFISELIPLDREXPDFRDPYCDAAYGNR
ISELSATSIIICFHNEARSTLLRSIHSVLNRSPLRLIAEVILVDDASTLP
HLGEPLDEYIAQHFEGLVKVVRLKERHGLMRSRMEGIKASSAQILTFLDS
HIEVTVGWLEPLLKLIADDPMAVPCPVIDAINDTTLYYTFIHKDLFGLFN
WKMEFEWHELVEEERKAKVNAWAPHANPVMAGGLFSIDKSWFEHLGFYDE
GMNIWGAENLELSFKIWMCGGNIQVVPCSRVGHIYRSWSPYKVNVGDIKR
NSIRVAKVWMDEFQYLYYDRLGNFQKSGDEKLGDYGDVQERVLFRKNLEC
HDFRWYLDNIAHHLPYHELIGAGEIRQDIMCVDKNDKIEKMNEPVNLTPC
HNLGGNQYWWMSSHRYLMRDYLCIGVLEDKVTVAXAHCGKIGPWTHDPKL
KQFKYDLTQTCLAGEYYEDGHAVMTMAPCNPEDDRQQWVFTRYDPVLLPY
ERLF
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mRNA from alignment at LSalAtl2s1437:31472..34409+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002308-698155 ID=EMLSAT00000002308-698155|Name=EMLSAT00000002308|organism=Lepeophtheirus salmonis|type=mRNA|length=2938bp|location=Sequence derived from alignment at LSalAtl2s1437:31472..34409+ (Lepeophtheirus salmonis)
TTTTGACAATTTTAAATTGATATTCACATTGCTTCCTTGCTTCTTTTCCA
TTTTTAAGGATCTAAAGTTATAAAGAGATTATTTTATAATGTTTTCGCAT
GATTTTCGTATACGTAAATAGTCGTGTGAGTGTGTTGACTTGTACTTGTG
TATGAACTTGGTTCTTCCTTCACCGTCCATCATCAAGGTAGAAGTAGAAA
TTATTAAGGCAAGCCTCTTTTAATATCGCCTCCGTTTTCTTGAAGAATAA
ATATTTTCTTTTTATGTATACACACCAACTACAATCATTGAAGCAGTGTG
CTCCGGCAATTCCTTTCAGACATTCACCTCCACGTTCAAATATTCCAATA
CCAAAATATTAACAATAATGACAACTCCTTATTATTAATAGACCAAAGAG
CCACGTTTCTACCACAAAGATCATGGCTGAATCCTCTACCAAAACTCCTT
CCTCCTCTCAGCCCCGTTCCTCATGGATCTTTCACATACTTTGGGCTATT
GGATGCGTGTTTCTCGGCGTTGCAGTGAATCGTTTTGATTATAATTATAT
TCAAAATGAAAAGTCATCAAACACTCTGCCTCCCAAAGAAGAAGAGTCTC
TCGTCTACACGCAAAAAACATTTCTTGTGGATGAATTGCATCCAAATCCT
AGGATTAGAGGCATTGACGAATCTACGAATTTGACAAATTGGCCACCTGG
TCATATGGGCCTTGGTGTGGAGGTCTCTCGCATGGACTTTAAAACCAAGG
CGAAAAAGAACAAAATGTACCAACAACATGCCTTTGAGGAATTCATTAGG
TAATTTAATCAAAAATATTTCTTTTATATATGAATAAATTTCCGATATTG
CTTCAGTGAACTAATACCGTTAGATAGAGAGTTMCCTGACTTTCGTGATC
CTTACTGTGATGCAGCATATGGCAATAGGATATCCGAACTATCCGCCACT
AGTATTATTATTTGCTTTCATAATGAAGCCCGGTCTACCCTTCTCCGAAG
TATTCATTCAGTTCTTAATAGATCTCCTCTTCGACTCATAGCAGAAGTCA
TTCTCGTCGACGATGCTTCTACCTTACCTCACTTGGGTGAACCATTGGAT
GAGTACATCGCCCAACACTTTGAGGGCCTTGTCAAGGTCGTCCGTCTCAA
AGAGCGTCATGGACTCATGCGTTCTCGAATGGAAGGAATCAAAGCGTCTT
CGGCGCAGATTCTCACGTTCCTTGATTCACACATAGAAGTCACTGTGGGT
TGGCTAGAACCCTTGCTTAAATTGATAGCAGATGATCCCATGGCTGTCCC
TTGTCCTGTGATTGATGCCATTAACGATACAACATTATATTACACCTTTA
TTCACAAGGACCTTTTTGGTCTCTTTAATTGGAAAATGGAGTTTGAGTGG
CATGAGTTAGTGGAAGAGGAAAGGAAAGCCAAGGTGAATGCCTGGGCTCC
TCATGCAAATCCCGTGATGGCTGGTGGACTTTTCTCAATTGATAAAAGCT
GGTTTGAGCATTTGGGATTTTATGATGAGGGAATGAATATATGGGGAGCG
GAAAATTTGGAGTTAAGTTTTAAAATTTGGATGTGTGGTGGAAACATTCA
AGTTGTGCCTTGTTCTCGAGTTGGTCACATTTACAGATCCTGGTCTCCTT
ATAAAGTAAACGTGGGTGATATCAAACGAAATAGCATTCGTGTTGCAAAG
GTTTGGATGGATGAATTTCAGTATCTCTACTATGATCGATTAGGAAATTT
TCAAAAGAGTGGGGATGAAAAATTAGGGGACTATGGGGATGTACAAGAGA
GGGTTTTATTTCGAAAAAATCTGGAATGCCATGATTTCAGATGGTACTTG
GATAACATTGCCCATCATTTACCTTATCATGAGCTTATTGGTGCTGGAGA
GATTCGACAAGACATCATGTGTGTAGATAAGAATGATAAAATTGAAAAAA
TGAATGAACCTGTTAATTTAACTCCTTGTCATAACTTGGGCGGTAATCAG
TATTGGTGGATGAGCTCACATCGATATCTTATGCGGTAGGACTTAAAAAA
ATACATCTTCTAACAAGTTTTAACTCCTTTTTTATATTTATTTTCAGTGA
TTATTTGTGCATCGGAGTTTTGGAGGACAAAGTGACGGTGGCCGKTGCTC
ATTGTGGAAAAATAGGACCATGGACTCATGATCCAAAACTAAAACAGTTC
AAATATGATCTAACGCAAACATGCCTTGCAGGTGAATACTATGAAGATGG
CCATGCTGTCATGACTATGGCTCCTTGTAACCCTGAGGATGATCGCCAAC
AATGGGTGTTTACGCGCTACGATCCTGTGCTTTTACCCTATGAAAGATTG
TTTTAAATAAACAGCGTTACGTTAGCTAAATCGTTACAGAACACTGAATT
GTTATAATTTATTTATATTTTATATATATATATATTGAATGTTTTTATAT
TTCATGATCATCATTTTTCTAAATCGTTGTTAATATAAAATATTACAACA
ATCCAAATTGTAAATTTCTATTCAGGCTTCGATCCAATTGATTTTATCTC
GAGGAAGAAACATATAACTTATAATACAATAATATCAAGTCTCAGATTCC
TCGAAAAGGATTAATCAAAATTTATTGATTTTATTCTTGATATGAAAGGT
ATCTATAACTCTTTAAATATACTTCTGATGATTTATTTTTAAAACGTACA
TATTATCCATAACAAAGTCGTCTAATTTATGTTCCTATGGATCATCTGTA
CGTTGTAAAGACTTTCATTATAAGCTTTAAATATTATGTCTACATACTTT
GTTTTCACAAAGTATATTTTTGTATCTGTAAATTAATATGAAAGTGCTCT
AGAGGTGCATATAAGTATCAAATATTGTCAATGATATTCATAAGGTATTG
TCAAATCTCATCGTGTTGAATATCTTTGGTCCAATCAT
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