EMLSAT00000002327, EMLSAT00000002327-698174 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002327
Unique NameEMLSAT00000002327-698174
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s143supercontigLSalAtl2s143:677948..678862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002327 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002327EMLSAG00000002327-685093Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010298EMLSAE00000010298-719226Lepeophtheirus salmonisexon
EMLSAE00000010299EMLSAE00000010299-719227Lepeophtheirus salmonisexon
EMLSAE00000010300EMLSAE00000010300-719228Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779287auto779287Lepeophtheirus salmonispolypeptide
EMLSAP00000002327EMLSAP00000002327Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002327

>EMLSAP00000002327 ID=EMLSAP00000002327|Name=EMLSAP00000002327|organism=Lepeophtheirus salmonis|type=polypeptide|length=202bp
MSSNNHWYSYSYSTSSSSGGALPNPLSSYDYPSSNGISDFYNYNNTDGTA
YTGHLGHVHNPHYWAASSFNTPTSPPLWAHTPSTLPSPHLCTPSPSSSLE
SFDKPVSDSEEDLTSQPTTTESKRVRDKKSSNNTSSEGSSLSRKERTAFT
KYQISELEREFIACNYLTRLRRYEISVALDLTERQVGNLESQGSRYGFKI
DE
back to top

mRNA from alignment at LSalAtl2s143:677948..678862+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002327-698174 ID=EMLSAT00000002327-698174|Name=EMLSAT00000002327|organism=Lepeophtheirus salmonis|type=mRNA|length=915bp|location=Sequence derived from alignment at LSalAtl2s143:677948..678862+ (Lepeophtheirus salmonis)
TATACCACCACCCCCATTACCTCATAAAACGTAAATTCCCTCAACAACTT
TTTCCCCCATCATCTTTTTAGTTCTTCAAGATGTCTTCAAATAATCACTG
GTACTCCTACTCTTATTCAACTTCATCATCCTCTGGAGGAGCACTCCCTA
ATCCTCTGTCCTCCTATGACTACCCCTCATCTAATGGAATCTCGGATTTT
TATAATTATAACAACACAGATGGAACAGCCTATACAGGTCATTTAGGACA
CGTTCATAATCCCCATTATTGGGCAGCCTCATCCTTCAACACTCCAACAA
GTCCTCCCCTTTGGGCTCATACCCCCTCCACGCTTCCCTCGCCCCATCTC
TGCACTCCAAGTCCATCCAGTTCCCTAGAAAGTTTCGATAAGCCCGTGTC
AGATAGTGAAGAGGATCTAACCTCACAACCTACCACGACAGGTTCTTTTT
AACCACATTTCTTCCTACCATGAGTGATATGTTATGTAACAACTTCATTA
TTTCAGAGTCCAAAAGAGTCAGAGACAAAAAATCCAGTAACAATACTTCC
TCAGAGGGATCTTCCCTGAGTCGCAAAGAGCGGACTGCCTTCACGAAATA
CCAAATATCCGAATTGGAAAGGGAATTCATTGCATGCAATTATTTGACAC
GTCTTCGACGCTATGAAATCTCAGTTGCATTGGATTTAACAGAGAGACAG
GTAGGMAATTTAGAGTCCCAAGGGTGGGAGATAATTTGCAAATGAATATA
TATATATATATTTATCTACATTCAATATTTCAGGTCAAGGTATGGTTTCA
AAATAGACGAATGAAATGGAAAAGGACAAAAACATCCTTTCTAAACTCTG
AAATGGCATCAGAATAAGCTTTTTCTTCTTCTTTTTTTTAATCTCTTGAA
GAAAGGACATAGGAT
back to top
Add to Basket