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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s143 | supercontig | LSalAtl2s143:799558..804145 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000002331 >EMLSAP00000002331 ID=EMLSAP00000002331|Name=EMLSAP00000002331|organism=Lepeophtheirus salmonis|type=polypeptide|length=631bp
MYNLKPINDFSQPIEVPDVMYRLKPINDVGEIREKGSLSFSGIESLEKRQ
ESILHGLTGLKAHLSAYKVSLGLDPIPTTSCNLMLNRVQQHXAYVLEKVD
KIQGNITSIHHLLTSNLSNDDLESFSKQDIVIFAHPSYPPYGILLAFHQL
KSKGEINILRYLARLYPSIWNYEGAEESKVEYFLDSIHSDLIWREGSERK
QMEEIIFKNLESTFLLTSSSSPFFGGGPEPGILDLISWSIVTRDHGKLAV
PSTALKKWLTSCNKVCAFYGSRQHRLSSHRHRRVSHGTXGHNRKTARNLL
LDVESDYVPGSLVSRQWPLIPDVIKGDSSNLEFLSNVEVVVTEKLDGSNL
ALKDLSNYTFSGVSLKSLEPHISTISSSFANYFKETLQIHTSLLLTVYGE
LIQKGTATSREDKFRYRERGFLPGNWXAFGVSIVVDQTSVHEIIEKLRVI
GFHARSVKAKGLSGEPLENDHIIVTMNQCLEKVFNLFQLPTIPTESLPFS
KLFSEYEGKLLQPDSCEGVVITLPPHGASFKWKQCSGGYSIKNGNFFKNK
STDPRYSDILQIMKKVAGISKDQTIEDLLNTALESARTKYPFEGNNRTQD
HIILITKEILEDLKDEKLSENEVYEFVMKHC back to topmRNA from alignment at LSalAtl2s143:799558..804145+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000002331-698178 ID=EMLSAT00000002331-698178|Name=EMLSAT00000002331|organism=Lepeophtheirus salmonis|type=mRNA|length=4588bp|location=Sequence derived from alignment at LSalAtl2s143:799558..804145+ (Lepeophtheirus salmonis)
ATCTTATCTTATAATTTCTCTATTTTTATTGTCAACATCATTATTATTTT
CTTCTTTATTATTTAACTTGCTGTCGAGGTTAGAAAAGATCCTCCGTTTC
CTACGCCACGTGAACTCATTGTTTATACGAACAGAGTAGTTATTAACTAT
CATGTATAATCTAAAGCCCATTAATGACTTCTCCCAACCTATTGAAGTCC
CGGACGTCATGTATCGTCTCAAACCCATCAACGACGTTGGAGAGATTCGT
GAAAAAGGAGTAAGTGTTCTTTGTATGTGAAGGAATCACGTGATGTATAT
TCTAATGTCTTATTCTGATTTGAATATATATGACGTCATATTGAACAATT
ATTTTTAAATAAAGTAATGCATTTAATTTTTGTACTTTTCTTGTAATTAC
TTTTATTAATTATTATGGAAATGCATTTTTCGCTTGCATGGAATGATAAA
GTAATGCTTAATGAGTTGCTTAATCATGTCCATGGATTATGATGATGATG
ACACTCGATGATGGATTCAAATTTTAATTATTTTTACTTAGAGTCTCTCG
TTCTCCGGTATTGAGTCCTTGGAAAAACGTCAAGAGTCGATTCTCCATGG
ATTGACTGGCCTTAAAGCTCATCTTTCTGCTTATAAAGTATCTTTAGGCT
TGGATCCCATCCCCACCACTTCTTGCAATGTAAGATTGATTTTCACGGAG
TAGTTCCCGCTAGGGGCTCTCCTCTATATACTTTCCGTCTACTATGTATT
TTAAAACATGATTTTAGTTGATGTTGAATAGAGTTCAACAGCATMAAGCC
TATGTTCTGGAGAAGGTTGATAAGATACAAGGCAACATTACATCTATTCA
TCATCTTTTGACTTCTAATTTGTCAAATGATGATCTTGAGGTACTTGATG
TTCCTTCATACCAACGTTACTTCCCTTGTTGCCTCCTTAATATAATAAAT
AATTCTACAATAAACAAAAGAAATTAATGACTTTCCAATTAATAATACAG
TTGTGATCCGTCAACACAAAATCAAACTAAAATGAGTGTGGCTTATATTT
GCATTCTTCAACTAATTCTCGTCAATATCTTTCCACAAATCATTCTTATT
AACTCTTTGCACCCCCCGCAAATTGCACTTAAAGGAACCAAAATTTAATG
TTAAATTGATTTTATTTGAAAGGCCATCTTTAAATTAATACAGGTTCTAA
ACTATAGTTAAAATTCTCAGATATTTAACTCATTCCGGATATTTGAATAA
TAAGCCTATAATTGACTCAAATATCTATGAAATATTGACCTGTATGTTTA
TACGAAGTAAAAAGTTAAAATGGGATTTTCTCCTTGTCTTCATTTTTGGT
CAAGATTGTTTTTATGTTGACGCACCACATTTCTCCTAATAAACTCATTT
GTCTCGTCATAATGCACCTTCATCCTTGCATGTTGTTATAATTAATTCTT
ATTAACTCAACTATGATATTATTTATATAGCAATAATATGAGGATTTATT
TTAAATTTATAATTATTTGCAGTCATTTTCTAAACAAGACATTGTCATCT
TTGCTCATCCCTCTTACCCTCCCTATGGAATCCTCCTCGCCTTCCATCAA
CTTAAATCCAAAGGTCTTAAAATCTACACCAGTTGTCATGTTCACTCATC
AATTACATGTTCTTTACCTGAGACTGCTCAAGATTTTTTACCATCCCATA
ATGATAATTTAACTACGTCCTGAAGCTGATTTGATAATCANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCA
AAGGAGAGATTAATATCCTTCGATATTTAGCACGACTTTATCCATCTATT
TGGAATTATGAAGGTGCTGAAGAATCAAAAGTTGAATACTTTTTGGACTC
AATTCATTCAGATTTGATTTGGCGTGAGGGTTCAGAGAGAAAGCAAATGG
AGGAAATTATTTTCAAAAACCTTGAATCCACATTTTTGTTGACAAGTTCT
TCATCCCCATTCTTTGGAGGGGGACCTGAGCCTGGGATTTTGGATTTAAT
TTCATGGAGTATCGTTACTCGAGATCACGGTAAATTAGCTGTTCCAAGTA
CTGCCTTGAAGAAATGGCTTACAAGCTGTAATAAAGTTTGTGCCTTCTAT
GGAAGCAGGCAGCATAGATTAAGCTCTCAYCGGCATCGGAGAGTTTCTCA
TGGAACTAKTGGCCACAACCGCAAAAGTAATTCAAACATTAAAACCCAAC
CAAAAAACCCAAGTCCCAAAAAAAGTATATAATTTAATAATTAATTAATT
TGTATTAATTCACTCTGTTGTTAATTATATTTGTTTTATTTATAGGTGAG
TCCCATTTTTAAATTAGAGTTAACAATTTTGTGTTTTCTAAATTGTTATC
ACTTAASAAAARAMAKAKCAAATAATACTTCTGGATTTAAAAAAAATTTA
TTGATAGTGTTGAAATAAAAACACATTAATGGAGAGCCAAAATTTTATCC
TTATTATTTCCCTTTTAGCTGCAAGGAACCTTCTTTTAGACGTTGAATCC
GATTATGTTCCTGGATCATTAGTGAGTCGTCAATGGCCACTTATACCTGA
TGTAATAAAAGGGGATTCCTCAAATTTAGAGTTTTTATCTAATGTAGAGG
TGGTTGTAACTGAGAAACTCGATGGGTCGAATTTAGCCTTGTCTAGTAAT
GGTGTTGTAGCTAGTAGAAGGATGGTGCTTCTAAAGAATCCGGACAGGTT
GGTTAGGACTCTATACATTTTAATTTATTAAGTAGTGGGGTGTGGGATTT
TATAGGGTATTAGCGGTCCGTCAACATAAAAATAATCTTGAACACAACCC
CAATATTAGAGAATAATTTTAATTGTTTTTTTACTTCATATATATAATAC
AGTCCAATATTTCATAAATATATTTTAGTTAATTATTGTAGTTGTACTCA
AATTTGTGAGATAAGTTCATATACCCAAGAACTTTTGCCAAAGTTTAAAC
CCTTTATTTGATATAAAATACCCCTTTCAAATAAAATCTATCAATTTCTT
ATTCTTTTATTGTTACGATCAATTTTGGCTACTTCTGGGTGTGTCATTAG
AGGTGCCTCCTAAGACTGATTAAGAATAATTCATTGAAGATAATTATTTG
TCAAACAATACAAATATGAACCACTCAAATTTGGGAAAAATCWTTCTAGC
TTACTTTAGTGTTGAYTGGCCATATTTGTTGGGAGTTCTTGTATTATTTT
CTATTGAGTCTCCTTATTAGACTTTATTCAATATTTTATCTCACTAATTT
ATCTAGGAAAGATTTGAGCAATTATACATTTTCGGGTGTCTCCTTAAAAT
CTTTAGAGCCTCATATTAGCACCATATCTTCGTCCTTTGCAAATTACTTT
AAAGAAACTCTACAAATTCATACTTCCCTACTCCTCACTGTCTACGGTGA
GTTAATACAAAAGGGAACTGCGACTTCTAGAGAGGATAAGTTCCGATATA
GAGAGAGGGGCTTCCTTCCTGGAAATTGGKACGCCTTTGGTGTATCCATA
GTTGTTGATCAAACCTCTGTTCATGAAATTATTGAGAAACTTAGAGTTAT
TGGTTTTCATGCAAGGTCTGTTAAAGCAAAGGGCTTATCTGGAGAGCCCC
TTGAGAATGATCATATCATAGTTACAATGAATCAATGTTTGGAGAAGGTA
TTTAATTTATTTCAACTACCAACGATTCCTACCGAGGTATAGTTTACTTA
GTATATTTTATGTTTTTATACTTAAAAAAAAAATAGTTCAGTCATTACCT
TTTAGCAAATTGTTTAGTGAATATGAGGGTAAACTTCTTCAACCAGATTC
ATGTGAGGGCGTAGTTATTACACTTCCACCTCATGGAGCTTCATTTAAAT
GGAAACAGTGCTCAGGAGGGTATTCAATTAAGAACGGGAATTTTTTTAAG
AATAAGTCGACTGATCCTAGATACAGTGATATATTACAAATTATGAAAAA
AGTCGCTGGGATATCCAAAGACCAAACAATTGAAGACTTGTTAAACACAG
CTCTTGAATCTGCGCGGACAAAATATCCTTTTGAAGGGAATAATCGAACT
CAAGATCATATCATATTAATTACAAAAGAAATTTTGGAAGATTTAAAGGA
TGAAAAATTAAGTGAGAATGAAGTCTACGAATTTGTTATGAAGCATTGTT
AATTATTAATAGCCAAAGGATTTAATTTATTGAGAATTAGTTTAAATGTA
AACCGAATTGATCATGAAAAAAAAAATATTACTACCTAATATTTTTAACC
AGTAGTTAAATTTATTACCCCTCTCCCACCCAAAACTTCAACAACAGAGT
ATAAAGTTATTTTATTCAATTTAGGAGACATGATTTTAATAGATTTCGGC
AAATATATAGAGTATGTTGTATTCGAGTTTGCTCAGGC back to top
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