EMLSAT00000002337, EMLSAT00000002337-698184 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002337
Unique NameEMLSAT00000002337-698184
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s143supercontigLSalAtl2s143:895539..897252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002337 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002337EMLSAG00000002337-685103Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000010356EMLSAE00000010356-719284Lepeophtheirus salmonisexon
EMLSAE00000010357EMLSAE00000010357-719285Lepeophtheirus salmonisexon
EMLSAE00000010358EMLSAE00000010358-719286Lepeophtheirus salmonisexon
EMLSAE00000010359EMLSAE00000010359-719287Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780023auto780023Lepeophtheirus salmonispolypeptide
EMLSAP00000002337EMLSAP00000002337Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002337

>EMLSAP00000002337 ID=EMLSAP00000002337|Name=EMLSAP00000002337|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MIXKAXEXLEAESFILGEVSLMRNLRHPNILPLLHSFYYDQGVCLVSPFV
HCGSLRNLLDTNYPKGLPEQWVISILRHVLSALDHLHSQGIIHRSVRASH
ILLSETGNAILTGFRYACLLPKSDRVGNIIQDRYEYSAHVASTNLNWLSP
EILAQKLYKYTEKSDIYSLGVTAXXIAXGAIPFSXMETSLMLLEKLRGTT
PKLFDASTMEEFGSESELLQMEFDNFYKNKSFSDDLHMVVEECTQFYPES
RPSASGLLCLSIFRKWRKSGXISVPSSKITLTFKGDETISSLVKKNEIEE
ISSQFSWNF
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mRNA from alignment at LSalAtl2s143:895539..897252+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002337-698184 ID=EMLSAT00000002337-698184|Name=EMLSAT00000002337|organism=Lepeophtheirus salmonis|type=mRNA|length=1714bp|location=Sequence derived from alignment at LSalAtl2s143:895539..897252+ (Lepeophtheirus salmonis)
ATGATTRCTAAGGCGSATGAGMTCCTAGAGGCGGAATCTTTCATCCTCGT ATGTATCATGTTAAAAAAATAATGAAGCATCTGAAGTTGATGCCTTCTTT CAGGGTGAAGTGTCTCTGATGCGGAACTTGCGACATCCCAATATTCTTCC CCTTCTACATTCTTTCTATTATGATCAAGGAGTTTGCCTCGTCTCCCCCT TTGTACATTGTGGATCCCTTAGAAACCTACTGGATACAAACTATCCCAAA GGMCTTCCCGAACAATGGGTTATCTCTATTTTACGACATGTTCTGTCAGC ACTAGACCATCTTCATTCTCAGGGTATAATACATCGAAGTGTTCGTGCTT CCCATATACTTTTGTCAGAGACGGGGAATGCTATTTTGACAGGATTTCGC TATGCTTGTCTCCTCCCAAAGTCGGATAGAGTCGGAAATATTATACAAGA CAGATATGAATACTCTGCTCATGTTGCCTCAACAAACCTCAATTGGCTAA GTCCGGAGATACTAGCACAAGTAATATTATATAGGACAATGCATTAACTA ATATTCTGTATCAAATTTCTTTCTATGGATAGAAACTTTACAAGTATACG GAAAAGTCAGATATATATAGTCTTGGTGTCACGGCTTMTYAAATAGCCAY SGGAGCCATACCTTTCTCTMACATGGAAACATCCTTGATGCTCTTAGAAA AACTACGTGGAACGACACCAAAGTTATTTGATGCCTCCACCATGGAAGAG TTTGGCTCGGGTAAGATAATATATAGCTGACAGGGGCGTCCGCAGCAGGT GGGCTGGAGGGGCTGMACCCCCCACACTCAAAATTAAGGATTTTTTTCTT TTTACTAGAATTTTTGTTTGCTCAGGATGAAAAAAAAATAGCGAAAATTG GGGTTAAACATTTCCTTTCTTTAAAACAAAGGAATGTTCCGGGAAATTAT GCTGCAGAGCAAAAAATTAAATTTTTTTTGTGAATTGCTATGGATTTTTG AAATTTTTTCCAAAAAATATAACTTTCTGTAAACNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNTCCCCCCCCCCCCCCCCAAAAAAAAA GAATATAATCCTGCGGACGCCTCTAGTTGATCCATACTTGTACTTCACAT CTAACTTAGAATCAGAATTACTTCAAATGGAATTCGACAATTTTTACAAG AACAAATCCTTCTCCGATGATTTGCATATGGTTGTTGAAGAATGTACTCA GTTTTATCCAGAGTCTAGGCCCTCTGCTTCTGGACTTCTTTGTCTGAGTA TATTCCGTAAATGGAGGAAGAGTGGTAGMATCTCTGTTCCATCCTCGAAA ATTACCCTCACTTTCAAAGGGGATGAGACAATTTCCTCTCTGGTGAAGAA AAATGAAATAGAGGAAATAAGCTCGCAGTTCTCTTGGAACTTTTGAAGAC ATCCAAATAAATGTGAATGCTACTTGTCAGATCTTCATCTTCTTATGACT TTTTAGATTTATTCTTAATTAATTATGAAGCAAAGCTACTTCTCTATCGT TAATAAAATCATGAATCTTTATTTCCTGATAACTTTATTATCAAAGCATT AACAATTAATAATACTAGCAAACAAAATAAAATACTGATTTAGACAAAAT GAAAGGAGTATGGG
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